KEGG   Drosophila simulans: Dsimw501_GD19586
Entry
Dsimw501_GD19586  CDS       T01065                                 
Symbol
Dsim_GD19586
Name
(GenBank) uncharacterized protein
  KO
K06100  symplekin
Organism
dsi  Drosophila simulans
Pathway
dsi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dsi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Dsimw501_GD19586 (Dsim_GD19586)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsi03021]
    Dsimw501_GD19586 (Dsim_GD19586)
   03019 Messenger RNA biogenesis [BR:dsi03019]
    Dsimw501_GD19586 (Dsim_GD19586)
Transcription machinery [BR:dsi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     Dsimw501_GD19586 (Dsim_GD19586)
Messenger RNA biogenesis [BR:dsi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     Dsimw501_GD19586 (Dsim_GD19586)
    U7-dependent histone pre-mRNA processing factors
     Dsimw501_GD19586 (Dsim_GD19586)
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N Adaptin_N PPP2R1A-like_HEAT HEAT_2 Cnd1
Other DBs
NCBI-ProteinID: KMZ01710
LinkDB
Position
3R
AA seq 1155 aa
MDSIIGRGQFVSETANLFTDEKTATARAKVVDWCNELVIASPSTKCELLAKVQETVLGSC
SELAEEFLESVLSLAHDSNMEVRKQVVVFIEQVCKVKVELLPHVINVVSMLLRDNSAQVI
KRVIQACGSIYKNGLQYLCSLMEPGDSAEQAWNILSLIKAQILDMIDNENDGIRTNAIKF
LEGVVVLQSFADEDSLKRDGDFSLGDVPDHCTLFRRQKLQEEGNNILDILLQFHGTTHIS
SVNLIACTSSLCTIAKMRPMFMGAVVDAFKQLNANLPPTLTDSQVSSVRKSLKMQLQTLM
KNRGAFEFASTIRGMLVDLGSSTNEIQKLIPKMDKQEMARRQKRILENAAQSLAKRARLA
SEQQDQQQREMELDTEELERQKQKSTRVNEKFLAEHFRNPETVVALVLEFLPSLPTEVPQ
KFLQEYTPIREMSIQQQVTNISRMFGEQLSERRLGPGAATFSREPPMRVKKVQPIESTLT
AMEVDEDAVQKLSEEELQRKEEATKKLRETMERAKGEQTVIEKMKERAKTLKLQEITKPL
PRNLKEKFLTDAVRRILNSERQCIKGGVSSKRRKLVTVIAATFPDNVRYGIMEFILEDIK
QRIDLAFSWLFEEYSLLQGFTRHTYVKTENRPDHAYNELLNKLIFGIGERCDHKDKIILI
RRVYLEAPILPEVSIGHLVQLSLDDEFSQHGLELIKDLAVLRPPRKNRFVRALLNFSVHE
RVDLRDRAQAHLVSLYHVHKILPSRIDEFALEWLKFIEQESPPAAVFSQDFGRPSEEPAW
REDTTKVCFGLAFTLLPYKPEVYLQKICQVFVSTSAELKRTILRSLDIPIKKMGVESPTL
LQLIEDCPKGMETLVIRIIYILTERVPSPHEELVRRVRDLYQNKVKDVRVMIPVLSGLTR
SELIAVLPKLIKLNPAVVKEVFNRLLGIGAEFAHQTMAMSPTDILVALHTIDTSVCDLKA
IVKATSLCLAERDLYTQEVLMAVLQQLVEVIPLPTLMMRTTIQSLTLYPRLANFVMNLLQ
RLIIKQVWRQKVIWEGFLKTVQRLKPQSMPILLHLPPAQLVDALHQCPDLRPALSEYAES
MQDEPMNGSGITQQVLDIISGKSVDVFVTDESGGYISAEHIKKEAPDPSEISVISTVPVP
AKPSQGLGTSRTALS
NT seq 3468 nt   +upstreamnt  +downstreamnt
atggatagcataattggacgcggccagtttgtctcggagacggccaatctgttcacggac
gagaagacagctacggcaagagctaaggtggtcgattggtgcaatgagctggtcatcgca
tcaccttcgacaaagtgcgaactgctggctaaggtgcaggagactgtgcttggatcctgc
tcggagctggccgaagaattcctggagtccgtgctgtctttggcccacgactcaaacatg
gaggttcgcaagcaggtagtcgtcttcatagagcaagtttgtaaagtgaaggtggagcta
ctgccccatgtcattaacgtcgtgtctatgctgcttagggataactcggctcaggtgatc
aaaagagtgatccaggcctgcggcagcatctacaagaatggattgcagtacttgtgcagc
ctcatggagcccggcgacagtgcggagcaggcgtggaacatcctcagcttaataaaggcg
caaatactggacatgatcgacaatgaaaacgacggcatacgtacaaatgccattaagttc
ttggagggcgtcgttgtcctgcagagctttgctgacgaggacagtctgaaacgagatgga
gacttctcgctgggcgatgtccccgatcactgcacactattccgccgtcaaaagttgcag
gaggagggcaacaatatcttagatatcttgcttcagttccacggaacaacgcatatttcc
tcagtgaacttgattgcctgcacaagcagcttgtgcacgattgccaaaatgcgacccatg
ttcatgggcgccgtggtggatgcctttaagcagctgaatgccaacctgccgcccaccctc
actgactcgcaagtaagctccgtgcgcaagagcctgaagatgcagctgcagacattaatg
aagaaccgcggtgcctttgagtttgcaagcactatccggggtatgttagttgacctgggg
tcctccacgaatgagatccagaagcttattcccaaaatggacaaacaggaaatggctcgc
agacaaaaacgcatccttgaaaatgctgcgcaaagtcttgcaaagcgagcgcggttggcc
agtgagcagcaggatcagcagcagcgagaaatggagctagacactgaggaattggaacgg
cagaaacagaagtccacacgagttaacgaaaagtttctggcagagcatttccgtaatcca
gaaactgttgtggccctggtgctagagttcttgcccagtctgcccactgaggtgccacaa
aagttccttcaggaatacacacccattcgcgaaatgtctattcagcagcaagtaaccaat
atctccagaatgtttggcgaacaactatctgaaaggcgcctaggcccaggtgccgcaacc
ttcagtcgagagccgccaatgcgggttaagaaagtacaaccgattgaatcaacactaact
gcaatggaagtggatgaggatgctgttcaaaaactgagtgaggaagagctccaacggaag
gaggaagcaaccaagaagctgcgcgagaccatggagcgcgctaagggcgaacagactgtt
attgaaaagatgaaggagcgcgccaagacgctgaagctgcaggagatcaccaagcccctg
ccacgcaacctaaaagagaaattcctaactgatgcagtgcgccgcatcctcaactcggag
cggcagtgcatcaagggaggcgtgtcatcgaagcgccgtaagctggtcaccgtgattgct
gcgacatttcccgataacgtgcgttatggcataatggagttcatcctggaggatataaaa
cagcgtatcgatttggcattttcgtggctctttgaggagtactctctgctgcaaggattt
acaaggcacacttatgttaagacagagaacagacccgatcacgcctacaacgagttgctg
aataagctcatctttggcattggagagcgttgcgatcacaaggataagattattctgatt
cgtagagtttatctagaagcacccattcttccggaagtctcaatcggacatctagttcaa
ttaagcctggacgacgagttctcccagcacggcctggagctgatcaaggaccttgcagtg
ctcaggccgccgcgaaagaatcgcttcgttagagcgttgctcaacttttctgtgcacgag
cgagtggatctgcgggatcgggcacaggcccatctagtcagtctgtaccatgtgcacaaa
atactaccgtctcggatagacgaattcgctctggagtggcttaaatttatcgaacaggag
tctccgccggcagctgttttctcgcaggactttggtcgcccaagcgaggagcctgcttgg
cgggaagacactaccaaggtgtgctttggtttggcctttaccctgctgccctataaaccg
gaagtttacttacagaaaatttgtcaagtgtttgtttccacatctgccgaactgaaacgc
acgatcttgcgcagtctagatatccccataaaaaagatgggtgtggaaagcccgacgttg
ctgcaactgatcgaggattgccctaagggcatggagaccttagtgatccgtataatttac
atactgacggagcgagtgccatccccccatgaagaattggtacggcgggttagggatctc
taccagaacaaggtcaaggatgtgcgcgttatgatacccgttctaagtggcttgacccga
tccgagttaattgccgttctgcctaagctgattaaacttaatcccgctgtggtcaaggag
gttttcaatcgattgcttggtatcggtgccgaattcgcccatcagacgatggccatgtcc
cccactgatattctcgtggctttgcacaccatcgatacgagtgtctgcgaccttaaagcc
atcgtcaaggctacatccctctgtttggctgaaagagatctgtacacacaggaggtactt
atggctgtgctgcaacagcttgtagaggttattccgctgcctactctgatgatgcgcaca
acaattcagagtctaaccctgtacccgcgtctggctaactttgtaatgaacttgctgcag
cgtctgataatcaagcaggtctggcgacaaaaagttatctgggagggcttcctaaagact
gtgcagcgcctgaaaccgcagtcaatgccgattctgctgcatcttcctcccgcccaattg
gtggacgcactgcatcagtgccctgatttaagaccagcattgtcggaatacgccgagagc
atgcaggatgaaccgatgaatggtagtggcattacccagcaggttctggacatcatctcc
ggtaaatcagtggatgtgttcgtgacggacgaaagcggcgggtacatcagcgccgagcat
attaaaaaagaggcaccggatccatcagaaattagtgtaatttccacagtgccagtaccg
gcaaaaccatcacaaggacttggaacatcccgtaccgcactgtcctga

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