Dactylococcopsis salina: Dacsa_3676
Help
Entry
Dacsa_3676 CDS
T02378
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dsl
Dactylococcopsis salina
Pathway
dsl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dsl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dacsa_3676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsl03021
]
Dacsa_3676
03400 DNA repair and recombination proteins [BR:
dsl03400
]
Dacsa_3676
Enzymes [BR:
dsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dacsa_3676
Transcription machinery [BR:
dsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dacsa_3676
DNA repair and recombination proteins [BR:
dsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dacsa_3676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
SAM_EPH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AFZ52153
UniProt:
K9Z1B7
LinkDB
All DBs
Position
3773201..3774157
Genome browser
AA seq
318 aa
AA seq
DB search
MALLKDFTVDCVESKTDNKTQNQYSKFVLEPLERGQGLTVGNALRRVLLSNLEGTAVTAT
RIAGVTHEFATVPGVREDVLEILLNLKELVFRSYSPGPHIARLAATGPATITAGDFNLPS
EVEVVDPTGYVATLAEGAKLEMEIRIERGTGYRVVNLEKEDVSSLDFLQIDAVFMPVSKV
KYTVEETRIDDGENKDRLILEITTNGSVKPEEALSQAATILVGLFSPLGNLNIEPLPVEK
EEEEDPNGQIPIEELQLSVRAYNCLKRAQINSVADLLDYSHEDLLEIKNFGQKSAEEVVE
ALQDRLGITLPQEKSTAT
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctgctaaaagactttaccgtcgattgtgtcgaatccaagactgataataaaacc
caaaaccaatatagtaaatttgtcttagaacccctagaaagagggcagggtttgaccgtt
gggaatgccctcagacgggttttgttatcgaacctagaagggacggcggtaacggcaact
cgaatcgcaggagtgacccatgagtttgctaccgtccctggcgtaagagaggatgttctg
gaaatcttactcaatctgaaagagcttgtcttcagaagttactccccaggacctcatatt
gctcgtctcgccgccaccggaccagccacaatcaccgcaggagattttaatctcccctca
gaagtggaagtggttgatcccactgggtatgttgctaccttagcagaaggggcaaaatta
gagatggaaattcgcatcgagagaggaacaggttatcgcgtcgttaacttggaaaaggaa
gatgtgagttctttagattttctccaaattgatgcggtgtttatgcccgtttctaaggtg
aagtacacggtggaagaaactcgcattgatgacggggaaaataaagatcgtctgattttg
gaaatcaccacgaacggtagtgtgaaaccagaggaagcactctcgcaagcggcaacaatt
ctggtgggattatttagtcccctcggtaatttgaatattgaaccccttcctgtggagaag
gaggaagaagaagaccccaacggacagattcccatcgaggagttgcaattgtccgtgaga
gcttataactgtctcaaacgagctcagattaactctgtcgctgatttactcgattatagt
cacgaagacctcttggaaatcaagaattttggacaaaaatcggcggaagaagtggtggaa
gcactacaagaccgcttggggattactctccctcaagaaaagtcaacggcgacttaa
DBGET
integrated database retrieval system
