Diprion similis: 124405088
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Entry
124405088 CDS
T08947
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
dsm
Diprion similis
Pathway
dsm03018
RNA degradation
dsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124405088
09123 Folding, sorting and degradation
03018 RNA degradation
124405088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124405088
03041 Spliceosome [BR:
dsm03041
]
124405088
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124405088
mRNA degradation factors
5'-3' decay
Lsm complex
124405088
Spliceosome [BR:
dsm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124405088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
124405088
NCBI-ProteinID:
XP_046735643
LinkDB
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Position
4:complement(18218932..18220191)
Genome browser
AA seq
149 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDVQMKSRGRGEMKGRGGQNQRGGRGGGGGGGGGGGRGTF
GGRGGRGPAPLGRGGNQGGNKPQNKPRTK
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgctaccgctttccttgttaagaacagcacaaaatcatcctatgctcgtcgagctgaaa
aatggggaaacatacaatggacacttggttagctgtgataattggatgaacattaatctc
agagaagtcatctgcacatccagggatggtgacaaattctggaggatgccagagtgctac
attcgtggtagtaccattaagtatctcagaattccagatgaagttatagacatggttaaa
gaagacgttcaaatgaaatcgagaggacgaggtgaaatgaaaggacgtggcggtcaaaat
caacggggaggtcgagggggaggcggaggaggaggtggtggtggtggcagaggtactttc
ggaggacgtgggggaagaggccctgcgcctttaggtcgaggtggtaatcaaggcggcaac
aaaccccaaaacaaaccaagaaccaaataa
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