Diprion similis: 124410645
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Entry
124410645 CDS
T08947
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
dsm
Diprion similis
Pathway
dsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124410645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124410645
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
124410645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_2
TPR_1
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_8
TPR_12
ANAPC3
TPR_11
ARM_TT21_C
TPR_7
BTAD
ChAPs
ARM_TT21
TPR_15
ARM_TT21_N
PknG_TPR
T7SS_EccA1_N
HrpB1_HrpK
HEAT_Nup120
DUF6584
HEAT_2
DUF7017
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
124410645
NCBI-ProteinID:
XP_046745120
LinkDB
All DBs
Position
9:3257730..3263985
Genome browser
AA seq
1306 aa
AA seq
DB search
MSKVTKLGLKEARELIKQKEFKEAIKKCKTILKEDKHNYIALVLLGAAMQEVEELRSQAP
LALKKASEIQPNNILAWQGLVAFYEREPSNHLALLELITAHSKLLQLDSDPAKFSDTINK
IVDLALELQDDTALAQVISTFNQLKEREMLSEDRVRIINSSLAKILTQYPKNLEEYSALL
EDTLAKVCKDLNVTNRQEYYRKYLKILYNIGKLDALLTEAARMHEEFSDDTYPLEWICRV
YSEKSILNGSCDGIEITPFYETLQALNVDSSVAAMAKAVNLYQNANFIEARDTLNHVVFL
KPNWLYPWVTSAEVNLKLYCFEEAERAAARANRLIKPDTPGKLELKIQLIMFEAISRNAN
SIDSRFSMEMLEDRISRDSSSHKFKLILARVRVHVEDPKANELLKELQNHSETKVEATIL
KAIALKNQKKLDEAADVIGSALENSEAWLVLGKIHWEMGDYNHSQMAFLKGIHADPYNWE
CLVYLGHYYQQYGKDLERSQKCYQKALQINPASEEAGIGLSTAFRLLKNSEANMQLLQRV
TMYGGGPKWAWLQLGLHYLDQGKPEQTINSLRNVVRSNPNDNHCWEILADAYLARGAHTS
ALKSYHRALELIPGSLYPMIQIANIKLMLSQFIEAKNDFEQVLQSEQRYIPALKGLAETL
LGLSKEYACKQLLGRSRENAELAADYLTTTITENSGFSCIWKLLGDACYQIATLPKKYCF
MKISAGLVKSESQEKHVMIERADIFSLSIRSYCRALSLSPGSALLWHDLASCYLSQLKIN
SASDRHDVANKAAAAAKQAIKLSPSSWMHWNLLGVICMTPEIKNYALSQHCYVMAIDMES
QNAVAWSNLGTLYLHLGDPYRANEAFSRAQRADPGYNNSWIGQALIAEKMNRKEAMDLFR
HTTQLGYHHQAALGYTHWVLSTLLNSEAKKDPLYTYTIENMHAISVAMDGINWYLEHVPD
DPCALNAYGLLLERQKLYNPAVKAFTLALKLATKDNEKDSLRVNLSRSLVQLNKFDEAVQ
LCQSVKNADFNSHCQLALSLFRAERYEESYGAYEAALHWLAGDGSDKAHVLCAMAAMAYM
FQGVDDAKTLLFQCIRIQPPTVSGLLAAAALGLLHQDINLVALVLKELKPYQDHPEHRNH
ITLLSAYSHVVQDDSKTAIRVLSKAAHRHPGDVESWVSLVRLLPESEPKIIGNSAEKALF
LGLRNCTDVVAKVSCTSSISHLILGLGDKGLKSSEKAIHSFPYMAESWATLVAALLPRSK
CRDSSPSAHWLTMLISTIRRRFAITRPMTQWLSNNERKASLWLTKS
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagtgacgaaattgggcttgaaagaggctcgggaattgatcaagcaaaaagaa
ttcaaggaagctataaaaaaatgcaaaaccatccttaaggaggataaacataattacata
gcactagtcctgcttggggctgctatgcaggaagtagaagaactgagatctcaagctccg
ttagctctcaaaaaggcatctgaaatccagcccaataatatcttggcctggcagggttta
gttgcattttatgagcgagaaccaagcaaccatcttgcgctgctggagctgatcacagct
cacagcaaactgttgcagcttgatagcgatccagcaaagttttccgacacaatcaacaaa
attgtggatcttgctttagaattacaagatgatacagccttggcacaagttatatcaact
tttaaccagcttaaagagagagaaatgttgagcgaggacagagtaagaataatcaattct
agcttggcgaagattttaactcaatatccaaaaaatttagaggaatattctgctctgtta
gaagatactcttgcaaaggtgtgcaaagatctgaatgtaactaataggcaagaatattac
agaaaatatttgaaaattctatataatattggaaaactagatgctttacttacagaagct
gctaggatgcacgaagagttctccgatgacacatatccgttggaatggatctgtcgagtg
tattccgagaaaagtattttaaatggttcatgcgatggtatagaaataacaccattctat
gaaacactgcaagctctgaacgtcgattcgagtgtggcagcgatggctaaagcagtaaat
ttgtaccaaaatgctaatttcattgaggcaagggacactttaaatcacgtcgtctttctt
aaaccaaactggttgtacccatgggtgacctcagcagaagttaatctaaaactctattgt
tttgaggaagctgaaagggcagctgcccgtgccaaccgattaataaaacctgacactcca
ggcaagctagagctgaagatacagcttattatgttcgaggcaataagtcgaaatgcaaat
tcaatagactcgaggttttctatggaaatgcttgaagatagaatcagcagagattcgtct
tcacacaaatttaaattaatattggcacgcgtacgtgttcacgttgaggatccaaaggca
aatgaattgttgaaggaacttcaaaatcactcggaaacaaaagttgaagctaccatcctt
aaagcaattgctttaaaaaaccaaaaaaaattagatgaagctgcagacgttattggctca
gctttggagaactcggaagcgtggttggtgctgggaaaaatccattgggaaatgggtgac
tacaatcacagccaaatggcatttttgaaaggcatccatgccgatccttacaactgggag
tgcttggtttatttgggtcactactatcaacagtatggcaaagacttggaacggtcccaa
aaatgttatcaaaaagccttgcaaatcaatccagcctctgaagaagcaggaatcggtctt
agtacagctttcaggctcttgaaaaacagtgaagcaaacatgcaattactgcagcgtgta
acaatgtacggagggggtcctaagtgggcttggcttcaattgggtttgcattatttagac
cagggaaagcctgagcagacaataaactcattgcgtaatgttgtaagaagcaatccaaat
gacaatcattgctgggagattttggctgatgcgtacttggcgagaggggctcatacatca
gcactaaaatcataccaccgagccctggaactgattcctggatctttatatcccatgata
caaatagctaacattaaactgatgctgagccaatttatagaggcgaaaaatgatttcgag
caagtcttgcagtctgaacagcgctatatcccagcattaaagggactagcagaaacatta
cttggcttgtctaaagaatatgcttgtaaacaactactgggtcgatcacgagaaaatgca
gaactagctgctgactacttgactacaaccattacagaaaatagtgggttttcttgcatt
tggaaactattgggtgatgcttgttatcaaatagcaactttaccaaagaagtattgcttc
atgaaaattagtgcaggcttagttaaatctgagagccaagaaaagcatgtaatgattgaa
agagcagatatattctcattgtccataaggtcatactgccgtgcattaagtttatcacca
ggttctgcattactttggcacgatctggcatcgtgttacttatcacagttgaaaataaat
tcagcctccgatcgtcatgacgtggctaataaagctgcagcagctgctaagcaagctata
aaactatcaccatcgtcgtggatgcattggaatctgttgggcgtgatctgtatgacacct
gaaattaagaattacgccctttcacagcattgttacgtaatggcgatcgacatggaatcg
caaaatgctgtagcttggagcaacttaggaactctatacctacatttgggcgatccttac
agggcaaacgaggcattttcacgagctcaacgagccgatcctggatataacaatagttgg
ataggtcaggctctaattgctgagaaaatgaataggaaagaagctatggatctgttcaga
cacactacccagttggggtatcaccatcaggctgcattgggttacactcattgggtttta
tcaactcttttaaactccgaagctaaaaaagatcctttgtacacatacacaattgaaaat
atgcatgcgatatcagtggcaatggacgggataaattggtaccttgaacatgttcctgat
gatccctgtgccttgaatgcctatggtttattactagagcgccaaaaattgtataaccct
gcagtcaaagcattcaccttggctttaaaattagccaccaaagacaatgagaaagactcc
ttgcgggttaacttatcacgcagtttagtgcagctcaataaatttgatgaagctgtccaa
ctttgtcagagtgtcaaaaatgctgatttcaattcccactgtcaacttgctctttcgcta
ttcagagccgagagatacgaagaatcttatggcgcttacgaagcagccttgcattggcta
gcaggtgatggctcagataaagcgcatgtactttgtgcgatggcagctatggcctacatg
tttcaaggtgttgatgatgcgaagactctactcttccaatgcattcgaattcaaccgcca
accgtttccggacttcttgccgcagctgcacttggattacttcatcaagacattaacttg
gttgccttggttctgaaagagttgaaaccatatcaagatcatccagaacacagaaatcat
attactttgctctctgcttactcgcatgttgttcaagatgatagtaaaactgctattaga
gtattgagtaaagctgcacatagacatcctggtgacgtcgaatcatgggtttcattagtg
cgcttattgcctgagtcagagccaaaaatcattggtaacagtgcagagaaggctttgttt
ttgggcctgagaaattgtacagatgtcgtggcaaaagtgagctgtacttcatcgattagt
catctcattttgggtctgggtgataaaggactaaaatctagtgaaaaggcaatacactca
tttccctatatggcggaaagttgggctacattggttgcagcacttcttccacgatccaag
tgtagagattctagtccaagcgctcattggctgacaatgttaatttccaccatacgacgg
cgttttgcaattacaagacccatgactcaatggctatcgaacaacgaaagaaaggctagt
ttatggctgaccaaatcgtga
DBGET
integrated database retrieval system
