Dyadobacter sandarakinus: HWI92_18435
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Entry
HWI92_18435 CDS
T07768
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dsn
Dyadobacter sandarakinus
Pathway
dsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWI92_18435 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsn03019
]
HWI92_18435 (recQ)
03400 DNA repair and recombination proteins [BR:
dsn03400
]
HWI92_18435 (recQ)
Enzymes [BR:
dsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HWI92_18435 (recQ)
Messenger RNA biogenesis [BR:
dsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HWI92_18435 (recQ)
DNA repair and recombination proteins [BR:
dsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HWI92_18435 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Peripla_BP_4
HEM4
Motif
Other DBs
NCBI-ProteinID:
QRR02751
LinkDB
All DBs
Position
4525094..4527247
Genome browser
AA seq
717 aa
AA seq
DB search
MPDQKLKALKQYFGYDHFRPLQAEIIDTVMANQDCLVLMPTGGGKSVCYQIPAVIRKGLT
IVISPLIALMKDQVEALTSNGISAAYLNSTLTGAEQDSIMWRAKMGELKLLYIAPERLFS
GNTFDFLREWDVSLFAVDESHCISSWGHDFRPEYRQLNHLKTRFPNVPIIALTATADMVT
RRDILRQLQLGDAETFISSFDRPNLTLTVLPGRKRVQQIQSFLGKHPDEPGIIYCLSRKG
TETVAASLKAAGFKAECYHAGLPAETRSRIQEQFQADNIQIIVATIAFGMGIDKSNVRWV
IHYNLPSNVESFYQEIGRAGRDGEPADTLLFYSYTDIITRQDMINNSDQSDTQKELLHAK
LKRMKQYAEADICRRRILLSYFNEAVDRDCGNCDVCHNPRTRFDATILAQKALSAITRTD
QKIAMGMLIDILRGSRNRNVIQHGYDRLPTFGVGHDLKGEEWAEYISQLLNSGFMDIAYD
EAHTFKLNAVSRQVLKGERKVELVRFIPLEERKAREEALLPKEKPKTEIIRDALFEQLRI
LRKQLADSLGIPPYAVFSDATLSEMAQKKPISESQMKAISGVGAEKFRRYGETFINEILS
FARTNTQPGTRIVKGLTYSDTWELYEQGYDLQEIAERRKLSPVTIISHLIKLKEEGKAIN
LQNLMLKSDYKQIIDAAEELQMGPNDPMKPLFETLDGKYDYGQIRLAMAIREERARF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcagaaattaaaagctttaaagcaatacttcggctatgatcacttccggccc
ttacaggctgagatcatcgataccgtgatggccaaccaggattgcctggtactcatgcct
acgggtggcgggaagtcggtatgctatcagatcccggcagtcatccggaaagggcttacg
attgtcatttcgcctttgattgcgctcatgaaagaccaggtggaggcacttacttccaat
ggtatcagtgcggcttacctcaactccacactgaccggggccgagcaggacagtatcatg
tggcgggctaaaatgggtgagctgaaactactctatattgctcccgagcgtcttttttca
ggcaatacttttgattttttaagagaatgggatgttagtctgtttgcggtggatgagtcg
cactgtatttcgtcctggggtcacgacttcagacctgagtaccggcagctgaatcatctg
aaaacacgttttccaaacgtacccatcattgcgctcactgccactgctgacatggtcacc
cgccgtgatatcctgcgccaattgcagctgggcgatgccgaaacgttcatttccagcttc
gacaggccgaatcttacattgaccgtactccccggaagaaaacgcgtacagcagatccag
agctttctgggcaagcaccccgacgagcctggtattatttattgcctcagcagaaaggga
accgaaaccgtagccgcaagcctgaaagcggcgggctttaaggcggaatgttaccatgcc
ggactacccgcagaaacacgttcgcggatccaggagcagtttcaggcagacaatatccag
atcatcgtcgccaccattgcatttgggatggggattgataaatccaatgtgcgctgggta
atccattataacctgccgtccaatgtggagagcttttaccaggagatcgggcgggcgggc
cgcgatggtgaacctgccgataccctgcttttttacagctataccgatattattacgcgg
caggacatgatcaacaattccgaccagtccgatacgcagaaggagctgctgcatgccaag
ctgaaacggatgaaacaatatgctgaggcggatatttgtcggcgcaggatcctgctgagc
tactttaatgaggccgtagaccgcgattgcgggaattgtgacgtttgccataatccgcgt
acccggtttgatgcaacgatcctcgcacaaaaggcactttcagccatcacacgcaccgac
cagaaaattgccatgggaatgctgatcgatatactgcgcggcagccgtaaccgtaatgtc
atccagcatggctatgaccgtctgcctactttcggagtagggcatgatctcaaaggagaa
gaatgggccgagtacatcagccagcttttgaacagcggatttatggacattgcctacgac
gaggcccatacctttaagctcaatgccgtcagcaggcaggtgctcaaaggggagcgaaag
gtggagctggtccgttttatcccgctggaagagcgcaaggcccgggaagaagcattgctg
ccgaaagaaaaacccaagacggagatcatccgtgatgcgttgtttgaacagctgcgtatc
ctgcgcaagcaacttgccgactcgctgggcataccaccctatgcggtattcagtgatgca
acactttccgaaatggcacagaaaaagccgatttccgaatcacagatgaaagccatttcg
ggcgtaggtgcggagaaattcagaaggtacggagagacttttatcaatgagatcctgtca
tttgcaagaacaaacacacaacccggtacccgcattgtgaaaggacttacttactccgac
acctgggagctgtatgagcagggctacgacttacaggaaattgcagaaaggcgcaaacta
agtccggtaacgattatctcgcatttgattaagctaaaagaagaaggaaaggcaatcaat
ctgcaaaatctgatgcttaaaagtgattacaagcagattattgatgcggcagaggagttg
caaatgggcccaaatgatcctatgaagccgctcttcgaaactctggatgggaagtatgac
tatggacagatcaggctggcgatggcgatcagggaggagagggcgaggttttaa
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integrated database retrieval system
