Dickeya solani IPO 2222: A4U42_03235
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Entry
A4U42_03235 CDS
T04410
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00260
Glycine, serine and threonine metabolism
dso00460
Cyanoamino acid metabolism
dso00630
Glyoxylate and dicarboxylate metabolism
dso00670
One carbon pool by folate
dso00680
Methane metabolism
dso01100
Metabolic pathways
dso01110
Biosynthesis of secondary metabolites
dso01120
Microbial metabolism in diverse environments
dso01200
Carbon metabolism
dso01230
Biosynthesis of amino acids
dso01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A4U42_03235
09102 Energy metabolism
00680 Methane metabolism
A4U42_03235
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A4U42_03235
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
A4U42_03235
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
A4U42_03235
Enzymes [BR:
dso01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
A4U42_03235
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ANE74431
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Position
complement(793626..794879)
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AA seq
417 aa
AA seq
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MLKREMNIADYDAELWQAMQQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTILGMN
LAHGGHLTHGSPVNLSGKLYNVVPYGIDDSGKINYDEMAELARTHKPKMIVGGFSAYSGI
VDWAKMREIADSIGAYLFVDMAHVAGLVAADVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQLVAKNAKAMVE
VFLSRGFNVVSGGTENHLFLLDLVSKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGTPAATRRGFKEAEVRELAGWICDVLDNINDEAVIERVKQKVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattacgatgccgagctatggcaagcaatgcag
caagaagtggtgcgtcaggaagagcacattgaactgattgcgtcagaaaactataccagt
ccacgcgtcatgcaggcccaggggtctcagctgaccaacaaatacgccgaagggtatccg
ggcaaacgctattacggcggttgcgaatacgttgatgtggttgagcaactggcgatcgat
cgcgccaaggaactgtttggcgccgactacgccaacgtacaaccgcactccggctctcag
gctaactttgctgtttacaccgcgctgctgcagccgggcgataccattctgggcatgaat
ctggcgcacggcggccacctgactcacggttctccggtcaacctgtccggcaaactgtat
aacgtggtgccttacggcattgatgacagcggcaagatcaactacgacgaaatggccgag
ctggcccgcacgcacaagccgaaaatgatcgtgggcggtttctccgcgtattccggcatc
gttgactgggcgaaaatgcgtgaaatcgccgacagcatcggcgcttatctgtttgtcgac
atggcgcacgttgctggtctggttgccgctgatgtttatccgaacccggttccgcacgcc
cacatcgtaaccaccaccacccataaaaccctggcgggcccgcgtggcggcctgatcctg
gctaaaggcggcgacgaagacctgtacaagaaactgaactctgccgtgttccctggcgga
cagggcggcccgctgatgcacgtcatcgccggtaaagccgttgcgctgaaagaagcgatg
gagccggagttcaagacttaccagcaactggtcgcgaaaaacgccaaagcaatggtcgag
gtgttcctgtcccgcgggttcaacgtggtgtccggcggtaccgagaaccacctgttcctg
ctggatctggtcagcaaaaacctgaccggtaaagaggctgacgctgcgctgggccgcgcc
aacatcaccgtgaacaaaaacagcgtgccgaacgatccgaagagcccgttcgtgacctcc
ggtatccgtatcggtacgccggcggccacccgtcgcggtttcaaagaagcggaagtgcgt
gaactggctggttggatctgcgatgtgctggacaacatcaacgatgaagccgttattgag
cgcgttaaacagaaagtgctggatatctgcgcccgtttcccggtttacgcctga
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