KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122098077
Entry
122098077         CDS       T07891                                 
Symbol
Col9a1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
  KO
K08131  collagen type IX alpha
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04151  PI3K-Akt signaling pathway
dsp04510  Focal adhesion
dsp04512  ECM-receptor interaction
dsp04820  Cytoskeleton in muscle cells
dsp04974  Protein digestion and absorption
dsp05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    122098077 (Col9a1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122098077 (Col9a1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122098077 (Col9a1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122098077 (Col9a1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    122098077 (Col9a1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    122098077 (Col9a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:dsp00535]
    122098077 (Col9a1)
Proteoglycans [BR:dsp00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   122098077 (Col9a1)
SSDB
Motif
Pfam: Collagen Laminin_G_2 Laminin_G_3
Other DBs
NCBI-GeneID: 122098077
NCBI-ProteinID: XP_042524500
LinkDB
Position
Unknown
AA seq 920 aa
MRSCWKIPVFFLVCSFLGPGASAASKRRPRFPINSISNGENELCPKIRVGQDDLPGFDLI
SQFQVDKAASRRAVQRVVGSTALQVAYKLGNNVDFRVPTRHLYPHGLPEEYSFLTTFRMN
GSTLGKNWNIWQIQDPEGREQVGVKINGQTKSVVFSYKGLDGSLQTAGFSGLPSLFDAQW
HKVMIGVERTSATLFVDCVRIESLPIKPRGQVDVDGFAVLGKLADHPQESVPFELQWMLI
HCDPRRPQRETCHELPLSLCPSQTTNKRGPPGEQGPPGPPGPPGVPGIDGVDGDRGPKGP
PGLPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGIPGSRGFPGRGIP
GPPGPPGTSGLPGELGRAGPSGDPGKRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPARS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGMQGLRGITGIVGDK
GEKGARGLDGEPGPQGIPGAPGDQGQRGPLGEAGPKGDRGGQGPRGLHGLPGPKGDAGLP
GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSPGAPGKAGLL
GNSGKPGQQGPAGEEGPRGPRGLPGSRGETGPAGSPGLPGKLGPLGRPGLPGLPGPPGLP
GMKGDRGVTGEPGPKGEQGASGEEGEAGQRGDLGDMGLPGSKGSAGSPGEPGLRGPEGSR
GLPGVEGPRGPPGPRGVQGEQGVTGLPGIQGPPGRAPTDQHIKQVCMRVMQEHFAEMAAS
LKRPDVGISGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGDLGEK
GERGPPGRGPKGLPGATGLPGDPGPASYGRNGRDGEPGPPGVAGIPGVPGPPGPPGPAGF
CEPASCTLQAGQRAFSKGPE
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgaggagctgctggaaaattccagttttcttcttggtatgcagcttcctgggacctggg
gcctcggcagcttccaagcgccgcccaagattcccaatcaactcaatctccaatggagag
aatgaactctgtcccaagattagggttggccaagatgacttgccaggatttgatctgatt
tctcagttccaggtggacaaagcggcttccagaagagctgtccagagggtggtggggtcg
acggccttacaagtggcctacaagctgggaaataatgtagactttagggtcccaaccagg
catttatatccccatgggctgcctgaagaatactcctttttaacaacattccggatgaat
gggagcacacttggaaagaactggaatatctggcagatccaggaccctgaggggagggag
caagttggagtgaagatcaatggtcagacaaaatctgttgtgttctcatacaagggactg
gacggaagcctccagacagcaggcttttcaggcttgccttccttgtttgatgcccagtgg
cacaaggtcatgattggagtggaaaggaccagtgccactctgtttgtagactgtgtcagg
atcgaatcattacccataaaaccaagaggccaggtggatgtggatggctttgctgtgctg
gggaaactcgcagaccacccccaggaatctgttccattcgagctacagtggatgctgata
cactgcgacccccggcgcccccagagggagacctgccacgagctgcccctgtccctctgt
ccgagtcagactacgaacaagagaggtcctcccggagagcaaggcccccctgggcccccg
gggccacctggagtgcctggcatcgatggcgtggatggtgaccgaggcccaaagggccca
cccggccttccgggtcctgctggagaacctgggaagccaggagcaccgggcaagcctggc
acgccaggggcagatggactaacaggacctgatggatctcctggctctgttggacctaga
ggccaaaaaggagagcctggaattcctggatctcgaggatttcctggccgtggcattcct
ggaccccctggccctcctgggacatcgggcctccccggagaactcggccgtgctggaccc
agtggtgaccctgggaagagaggacccccggggccccccggccctccagggcccagcgga
acaattggatttcatgatggagatccactgtgtcccaattcctgcccaccagctcgctcc
ggatatccaggcctaccaggcatgaggggtcataaaggggccaaaggggaaattggagaa
ccaggaagacaaggacacaagggtgaagaaggcgaccagggagaactgggagaagttggc
gctcaaggccctccaggaatgcaaggcttgagaggcatcactggcattgttggagacaaa
ggagaaaagggtgctcggggcttggatggggagcctgggccacagggtatccctggggca
ccgggagaccaagggcagcgaggacctctgggtgaagccgggcccaagggagacagggga
ggacaaggccctcggggactgcacggactcccaggacccaaaggggacgcgggcttgccg
ggtgtggatggccgagatgggatccctggaatgccaggaacaaagggcgagccggggaag
cctgggcctccgggggacgcgggtctccagggactaccgggtgtacctggaattcctggt
gcaaagggtgttgctggtgaaaagggaagccccggagctccagggaaggctggcctgttg
gggaattctggaaaaccgggccagcaggggcctgcaggagaggaggggcccagaggaccc
cgggggcttcctggcagcagaggagagacaggaccggcagggtccccaggcctgcctggc
aaactgggccccctgggccgcccgggcctccccggcttgcctgggcccccaggcctcccg
ggaatgaaaggcgaccggggtgtgactggcgagcccggcccaaagggagaacagggagcc
tctggtgaggagggggaagcgggacaaagaggcgacctgggagatatgggattgcctggc
tcaaagggatctgctgggagccctggggagcccggcctgcgggggccagaaggaagtcgg
gggcttccaggagtcgaaggaccacgaggaccgccggggccccggggtgtgcagggggag
cagggcgtcactggtctacctggcatccagggccctccggggagagctccaacagaccag
cacatcaagcaggtctgcatgagagtcatgcaggaacactttgcagagatggctgccagt
ctgaagcgccctgatgtgggcatctcaggactccctgggcgcccaggcccccctggacct
cctggccctcctggagagaatggcttccccggtcagatggggatcaggggcctcccaggg
atcaaaggtccccctggggctcttggtctgagaggacctaaaggtgacttgggagaaaaa
ggggaacgtggtcctcccgggcgaggtcccaaaggattgccaggagctactggcctccca
ggtgacccaggccctgccagctatgggagaaatggccgggacggggagccagggccccct
ggtgtggcagggattccaggggtgcctgggcccccaggacctcctggacctgcaggtttt
tgtgagccagcctcctgcaccctgcaggctggccagcgagcgtttagcaaagggcctgag
tag

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