Dipodomys spectabilis (banner-tailed kangaroo rat): 122104935
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Entry
122104935 CDS
T07891
Symbol
Capn1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04141
Protein processing in endoplasmic reticulum
dsp04210
Apoptosis
dsp04217
Necroptosis
dsp04218
Cellular senescence
dsp04382
Cornified envelope formation
dsp05010
Alzheimer disease
dsp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122104935 (Capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122104935 (Capn1)
04217 Necroptosis
122104935 (Capn1)
04218 Cellular senescence
122104935 (Capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122104935 (Capn1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
122104935 (Capn1)
05022 Pathways of neurodegeneration - multiple diseases
122104935 (Capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dsp01002
]
122104935 (Capn1)
Enzymes [BR:
dsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
122104935 (Capn1)
Peptidases and inhibitors [BR:
dsp01002
]
Cysteine peptidases
Family C2: calpain family
122104935 (Capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
122104935
NCBI-ProteinID:
XP_042531900
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MAEEIITPVYCTGVSAQVQKQRAKELGLGRHENAIKYLGQDYEQLRARCLQSGALFRDEA
FPPVPQSLGFKELGPNSSKTYGIKWKRPMELLSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNDTLLHRVVPHGQSFQDGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYQIILK
ALERGSLLGCSIDISSVLDMEAVTFKKLVKGHAYSVTGAKQVNYQGQMVSLMRIRNPWGE
VEWTGAWSDGSSEWNNVDPYERERLRIKMEDGEFWMSFRDFMREFTRLEICNLTPDALKS
RTIRNWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLDEVDDEDDYGSRESGCSFV
LALMQKHRRRERRYGRDMETIGFAVYEVPPELVGQPAVHLKRDFFLANSSRARSEQFINL
REVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTQELDDQIQANLPDEQVLSE
EEIDENFKALFRQLAGEDLEISVKELQTILNRIISKHKDLRTKGFSLESCRSMVNLMDRD
GNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELII
TRYSEPDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagatcatcacgcccgtgtactgcacaggggtgtctgcccaagtgcagaag
cagcgggccaaggagctgggcctgggccgccatgagaacgccatcaagtacctgggccag
gattatgagcagctgcgagcaagatgtctgcagagcggggctctgttccgagatgaggcc
ttccccccagtgccccagagcctgggcttcaaggaactgggtcctaactcctccaagacc
tatggcatcaagtggaagcgtcccatggagctgctgtcaaacccccagtttatagtggat
ggagccactcgcacggacatctgccagggcgcgctgggggactgctggctcctggccgcc
atcgcctccctcacgctgaacgacaccctcctgcaccgagtggtcccccacggccagagc
ttccaagatggctacgcgggcatcttccatttccagctgtggcaattcggggagtgggtc
gacgtggttgtggatgacctgctgcccaccaaggatgggaaactggtgttcgtgcactct
gcccaaggcaacgagttctggagtgccctgcttgagaaggcctatgccaaggtgaacggc
agctacgaggccctgtcgggcggcagcacctcggagggctttgaggacttcacaggcggg
gtcaccgagtggtacgagctgcggaaggcgcccagcgacctctaccagatcatcctcaag
gcgctcgagcgaggctccctcttggggtgctccatcgacatctccagtgtcctggacatg
gaagccgtcacatttaagaagctggtgaagggccatgcgtattcggtgactggggccaaa
caggtgaactaccagggccagatggtgagcctgatgcggatacggaacccctggggcgag
gtggagtggacaggagcctggagtgatggctcctcagagtggaataacgtggacccctat
gaacgggaacgactgaggatcaagatggaagatggggagttctggatgtctttccgagat
ttcatgcgagagttcacccgcctggagatctgcaacctgacgccagacgcactcaagagc
cggacgatccggaactggaacaccacgctgtatgagggtacctggcgtcgggggagcacc
gcaggtggctgccggaactacccagccaccttctgggtgaacccccagttcaagatccgg
ctggatgaggtggatgatgaagatgactatgggagtcgcgagtccggctgcagcttcgtg
ctggcgctcatgcaaaagcaccgccgtcgcgagcgccgctatggccgggacatggagacc
attggcttcgctgtgtacgaggttcccccggagctggtgggccagccggccgtgcacttg
aagcgagacttcttcctggccaactcctctcgggcgcgctcagagcagttcatcaacctg
cgagaggtcagcacccgcttccgcctgccccccggagagtacgtggtggtgccctccacc
ttcgagcccaacaaggagggagacttcgtgctgcgcttcttctcagagaagagtgccggg
acccaggagctggatgaccagatccaggccaaccttcctgatgagcaagtgctctctgaa
gaggagattgacgagaacttcaaggccctgttccggcagctggcgggggaggacctggag
atcagtgtcaaggagctgcagaccatcctcaacagaatcattagcaaacacaaagacctg
cggactaaaggcttcagcctggagtcatgccgcagtatggtgaacctcatggaccgtgat
ggcaacgggaagctgggcctggtcgagttcaacatcctgtggaaccgcatccggaattac
ctgtccatcttccggaagttcgacctggacaagtcgggaagcatgagtgcctacgagatg
cgcatggccatcgagtccgcaggcttcaagctcaacaagaagctgtacgagctcatcatc
acccgctactctgagcctgacctggccgttgacttcgacaactttgtgtgctgcctcgtg
cggctggagaccatgttccggtttttcaaaacgttggacacagatctggatggagttgtg
acctttgacctgtttaagtggttacagctgaccatgtttgcatga
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integrated database retrieval system
