Dipodomys spectabilis (banner-tailed kangaroo rat): 122105305
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Entry
122105305 CDS
T07891
Symbol
Ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122105305 (Ap5b1)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
122105305 (Ap5b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
122105305
NCBI-ProteinID:
XP_042532437
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MGPQSRDAWAQRLGAFRASPAAFLAGAEGEHLGRDLLSDLRSEKLSEPTKVSLLALSLEY
PAQLWPDAPAAEAAATSLLDTLVLLPPRPSALRRPLLLATTTVLVAGGALGPSSGASGRL
LPLLLGLASGRDVGRSFGPASEQRPLQATACECLRELESCQPGLLGGSLGPLRSLLGQGG
PVQPLSLLLALALRHTLLVRGRSGAGLHSLLLAGVSCRGSAWDWTLAKGDARLQPQAPCW
PTAEGEQGPAEGEPSSEDTQELRATVAQLLDASYLLTPVAQAQLLWLLGWALRGLRTQPP
VLFKPQLVRLLGTAQLALLHSILALKAAFGEALFTAQDEALLLRRLTLAAQHPSLPQPTH
LFYLHCILTFPENWPLGPEGEEAAPLLLGPQLCRSLMPSLLHEPMALLARLHLLCLCCAE
DEDEEKGLVQSPQRYLEELLAGLRQRAALEGGPRALAILCFQASYLVASCLAKQPAVVTP
LIHGLAQLYQARPVLAPHFVDLLDQLGPELREPLRQVLRQEVVSRPVRDEALRWHLHMLA
KVAGGDAQNATLSFLQAAATHCTDWGLQQALLGVCRVLLQTSGGAGLADLLQVLARQLED
PDGRDHARLYYILLAHLAEPKLGMALGPSLAVPALASSLVAENQGFTATLMVQETPAPIQ
LSLGPQRAKGPFPVLQLQVETLEPVYSLELRFHVEGQLYGPLEAIHVPCLCPGRPAHPLS
LSLQPRCPVPAQLDVQALYTTPAGLTCHACLPPLAVSFADLFLPFPQAPKGAESNFFEEL
WDSCLPKGAESRVWCPLGPQSLETLVARHLGPFVVVAQPPTSYHIAVRLPPDSMLLLRLE
MARRDGVPVALRTDDWAVLPLAGDYLRGLSAC
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggggccccagagccgggacgcctgggcccagcgcctgggggccttccgagccagccct
gccgccttcctggccggggccgagggcgagcacctgggtcgtgacctgctgagtgacctg
aggagcgagaagctgagcgagccgactaaggtttccctgctggccctgagcttggagtac
ccagcccagctgtggcctgacgcccctgcggcagaggcggccgccacctccctgttggac
accctcgttctcctgcccccgcgaccctcagccctccgacggcccctgttgctggccact
accaccgtcctggtggcaggcggcgccctgggccccagctcgggagcttccggccggctc
ctgccgctcctgctcggcctggcctccggccgggatgtagggcgaagctttggccccgcc
tcggaacagcgccccctgcaggccacggcgtgcgagtgccttcgcgagctggagagctgc
cagcctgggctgctggggggcagccttgggccactgcggagcctgctggggcaagggggt
cctgtgcagcccctcagcctgctgctggcgctggcgctgcgccacacgctgctggtccgc
ggcaggtctggggctggactgcacagcctgctgctggcaggggtctcctgcaggggcagc
gcctgggactggacactggccaaaggagatgcccgccttcagccccaggcaccctgctgg
ccgacagctgaaggggagcagggccctgcagagggagaacccagctccgaagacacccag
gagctgagggccactgtggcccagctgctggacgcttcctacctgctcactcctgtggcc
caggcccagcttctgtggcttctgggctgggccctgcgaggtctgcggactcagccacca
gtgctcttcaagccacaactggttcgcctgctgggaacagcgcagctggccctgctgcac
tctattctggctctcaaggcagcttttggtgaggcgctgttcactgcccaggatgaggcc
ctgctgctccgccggctcaccctggcagcccagcacccatccctaccccaacccacacat
ctcttctacctgcactgtatcctgaccttccctgagaactggccgctgggcccggagggg
gaggaggctgccccgctgctgctgggaccccagctgtgccgcagcctcatgcccagcctc
ctgcatgagccgatggccctcctggcccgcctgcatttgctgtgcctatgctgtgccgaa
gacgaggacgaggagaaaggcctagtccagagcccacagcggtacctggaggagctgctg
gctggcttgcggcagagggcagctctggagggtggaccccgcgcactggccattctctgt
ttccaggcctcctacctggttgccagctgcctggccaagcaacctgcagtggtaacaccc
ttgatccatggactggctcaactttaccaagctcggcctgtgcttgcgccccactttgtg
gacttgttggatcagttggggcctgaactcagggagcccctcagacaggtgctgaggcag
gaagtggtgtccaggccagtccgggatgaagctcttcgctggcatctgcacatgctggcg
aaggtggcaggaggggatgctcagaacgccaccctcagcttcctgcaggctgcagccact
cactgcactgactggggcctgcagcaggctctgctgggggtctgccgggtcttgctgcag
acaagtggaggtgctggcctggcggatttgctgcaggtgttggccagacagctagaggac
cctgatgggcgggatcatgcccgtctgtactacatccttttagcccacctggcagagccc
aagttgggaatggcactgggcccctcccttgctgtgcctgcactggcctcatccctggtg
gctgagaaccagggctttacagcaacactgatggtacaggagaccccggccccaattcag
ctgagcctcgggccccagagggcaaaaggcccattcccagtgctccagctccaggtggag
acgctggagcctgtctattccctggagctgcgcttccatgtggaaggacagctctatggt
cccttggaggccatccacgtgccctgcctgtgtcctggccgccccgcccaccctctgtcc
ctgtccctgcagcctcgatgcccagtccctgcacagctggatgtccaggccctgtacact
acacctgctggcctcacctgccacgcctgcctgccacccctggcagtgagcttcgctgac
ctctttcttcctttcccccaggcccccaagggggctgaatcgaacttctttgaggagctc
tgggactcttgcctaccaaagggtgcagaaagccgtgtgtggtgcccacttgggccacag
agcctggagactttggtggcccgccacctagggccctttgtagtggtggcacagcctccc
accagctaccacatagctgtccggctgcctccggactccatgctgctgctgcggctggag
atggcccgcagggatggagtgcccgtggctctgcggacagatgactgggctgtgctgcca
ctggctggtgactacctccgtgggctttcagcctgctga
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