Dipodomys spectabilis (banner-tailed kangaroo rat): 122105516
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Entry
122105516 CDS
T07891
Symbol
Col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04151
PI3K-Akt signaling pathway
dsp04510
Focal adhesion
dsp04512
ECM-receptor interaction
dsp04820
Cytoskeleton in muscle cells
dsp04974
Protein digestion and absorption
dsp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122105516 (Col9a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122105516 (Col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122105516 (Col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122105516 (Col9a2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122105516 (Col9a2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
122105516 (Col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dsp00535
]
122105516 (Col9a2)
Proteoglycans [BR:
dsp00535
]
Extracellular matrix (ECM) proteoglycans
Others
122105516 (Col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
122105516
NCBI-ProteinID:
XP_042532691
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MATPAAPRSLLLLLQVLGLVLAQIRGPPGERGPPGPPGPPGVPGSDGIDGDKGPPGKAGP
PGSKGEPGKPGPDGPDGKPGIDGLMGAKGEPGPTGTPGVKGQPGLPGPPGLPGPGFAGPP
GPPGPIGLPGEIGVPGPKGDPGPEGPAGPPGPPGKPGRSGTIQGLEGSADFLCPTNCPAG
VKGPPGLQGVKGHPGKRGILGDTGRQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGVAG
PKGETGPRGYKGMVGSIGAAGLPGEEGPRGPPGRTGEKGDVGSQGVRGPQGITGPKGATG
PPGIDGKDGTPGIPGTKGSAGQAGRPGSQGHQGLAGVPGQPGTKGGPGDKGEPGQQGLPG
FSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGQQGPKGEQGPPGIPGPQG
LPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGDKGESGEPGPKGQQGIRGEPGYPGPSG
DAGAPGVQGYPGLPGPRGQAGNRGLPGHPGRQGVPGRDASDQHIIDVALKMMQEQLAEVA
VSAKREVLGAAGMMGPPGPPGPPGYPGKQGPQGHPGPRGIPGIVGAVGQIGNTGPKGKRG
EKGDQGEVGRGHPGMPGPPGVPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLP
GFCEPAACLGASAYASARLTEPGSIKGP
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggccacgccggccgccccccgcagcctgctgctgctcctccaagtgcttgggctcgtc
ctggcgcagatcagaggtcctccgggagaacgggggcctcccggacccccaggaccgccg
ggagtgcctggttcggatggcatagacggtgacaaagggccccctgggaaagctggccct
ccgggatccaaaggagagcctggcaaaccggggcctgatgggcctgatgggaagccgggc
attgacggattaatgggagccaagggggagcctgggcccacgggaactcctggagtcaag
ggtcagcccgggcttccagggccccctggtctgccgggtcctggttttgctggacctcct
ggaccacctggacctattggtcttcctggtgaaattggagtcccaggccccaagggggat
ccaggaccagagggaccagcaggacccccaggtcctcctgggaaaccggggcgctcagga
accatccaaggcttggaaggcagtgccgatttcctgtgtccaaccaactgtccagcaggt
gtgaaaggtcctccagggctacagggagtcaaggggcatccaggcaaacgtgggattctg
ggtgatactggccgtcaggggaagccgggccccaagggagatgtaggtgcctctggagaa
caaggcatccctggaccgccgggaccccaaggcatcaggggctacccaggagtagcagga
cctaaaggagagaccggtcctcgtgggtacaaaggcatggtgggctccatcggtgccgcc
gggttaccgggtgaggaaggtccaaggggaccaccaggccgaactggggagaagggtgat
gtgggtagccaaggtgttcgaggaccgcaagggataacgggcccaaagggggcgactggt
cctccaggaatcgatggcaaggatgggactccaggcatacctggcaccaagggcagtgca
ggccaggcagggcggccaggaagccagggccaccagggcctggcgggtgtgccgggccag
cctgggacaaaaggaggccctggagacaagggtgagccgggccagcagggcctccctgga
ttctctggtccccctggaaaggagggagagccagggcctcgaggagaaattggtccccag
ggcattatgggacagaagggtgaccagggtgagaggggtccagtgggacagccaggtcct
caaggacaacagggcccaaaaggggagcagggccccccaggaattccaggacctcaaggc
ttaccaggcatcaaaggggacaagggctcgccagggaagactgggccccgtggtggagtg
ggtgacccaggcgtagcaggcctccctggagagaaaggggataagggcgagtctggagag
ccagggcccaaagggcagcaaggaatccgaggagagccaggctaccctggccccagcggg
gatgcaggcgccccaggtgtgcaggggtacccagggctgcctggcccccgaggacaggct
ggaaaccgaggcttgccaggccatccgggaagacagggtgtgccgggccgagatgccagt
gaccagcacatcatagacgtggcgctgaagatgatgcaagagcaactggcagaggtggct
gtgagtgccaagcgggaagtcctgggtgcagctggcatgatgggtcccccgggacctcct
gggcctcctggatacccaggcaagcaaggacctcaagggcaccctggccctcggggcatt
cctggcatcgtgggagctgtgggtcagattggcaacacagggcccaaaggaaagcgtggc
gagaagggtgatcaaggagaagtaggacgtgggcaccccgggatgccagggcccccaggg
gtcccaggactccctggccggcctggccaggcaatcaatggcaaagatggagaccgaggg
tccccaggggctccaggagaggcaggccgacccggcctgccaggccctgtggggctgcct
ggcttctgtgagcctgcagcctgccttggagcttcagcatatgcctctgcccgtctcaca
gagcctggatccatcaaggggccatga
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