Dipodomys spectabilis (banner-tailed kangaroo rat): 122107640
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Entry
122107640 CDS
T07891
Symbol
Polb
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03410
Base excision repair
dsp05166
Human T-cell leukemia virus 1 infection
dsp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122107640 (Polb)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
122107640 (Polb)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
122107640 (Polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122107640 (Polb)
Enzymes [BR:
dsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122107640 (Polb)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
122107640 (Polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
122107640 (Polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
HHH
Cdd1
HHH_2
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
122107640
NCBI-ProteinID:
XP_042535377
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MSKRKAPQETLNGGITDMLMELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRRNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPNFTSESAKQPKLLHRVVEQLQKMHFITDTLSKGDTKFMGVCQ
LPSKNDEKECPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcggaaggcgcctcaggagactcttaacgggggcatcacggacatgctcatg
gaacttgcaaactttgagaagaacgtgagccaggccatccacaaatacaatgcgtacaga
aaagcagcatctgttatagcaaagtacccacacaaaatcaagagtggagcagaagctaag
aaattaccaggagtaggaacaaaaattgcggaaaagattgatgagtttttagcaactgga
aaattgcgtaaactggaaaagattcggcaggatgatacaagttcatccatcaatttcctg
actcgagttagtggcattggtccatctgctgcaaggaagtttgtagatgaaggaattaaa
acattagaagatctcaggagaaatgaagataaattgaaccatcaccaacgaattgggttg
aaatattttgaggactttgaaaaaagaatccctcgcgaagagatgttacaaatgcaagat
attgtactaaatgaagttaaaaaagtggattctgaatacattgctacagtctgtggcagt
ttcagaagaggtgcagagtctagtggtgacatggatgttcttctcacccacccaaacttc
acctcggagtctgctaaacagcccaagttgttacatcgtgttgtggaacagttgcaaaag
atgcattttattaccgatactctgtcaaagggggatacaaagttcatgggtgtctgccaa
cttcccagtaaaaatgatgaaaaggaatgtccacacagaagaattgatatcagattgata
cccaaagatcagtattactgtggtgttctctacttcactggcagtgacattttcaataag
aatatgagagctcatgccctagaaaagggtttcacaattaatgaatataccatccgtcct
ttgggagttactggagttgctggagaacccttgccagtggatagtgagaaagatatcttt
gactacatccagtggaaataccgagaacccaaggatcgaagtgaatga
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