Dipodomys spectabilis (banner-tailed kangaroo rat): 122114512
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Entry
122114512 CDS
T07891
Symbol
Dis3l
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122114512 (Dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122114512 (Dis3l)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
122114512 (Dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_S1
Rrp44_CSD1
DUF6276
OB_HELZ2
DUF7043
Motif
Other DBs
NCBI-GeneID:
122114512
NCBI-ProteinID:
XP_042543665
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MLQKQEKVLLLKTFQGRTLRIVREHYLRPRVPCHSPLCPQPSACRNDGKLLSSDVTHYVI
PDWKVVQDYLEILEFLELKGIIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANE
FQQHCYLPREGGEPMEKWQTRSIYNAAVWYYHHCQDRMPVVMVTEDEEAIQQYGSETEGV
FVISFKNYLDNFWPDLKAAHELCDSILQSRREKESENQESHGKEYPEHLPAEVLEAGVKS
GCYVQGILNVNKHRAQIEAFVRLQGASCKDSGLVSDILVHGLKARNRAIHGDLVAVELLP
TREWKGRTAALCENDIEDKASGESPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGK
NAQKVLVTPWDYRIPKIRISTQQAGALQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL
EGEIATILVENSISVVPFSEAQMCEMPVNSPENPWKVSPEEEKRRKDLRKTHLVFSIDPK
GCEDVDDALSVRTLHNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP
PVLSADLCSLLGGVDRYAVSVMWELDKTSYEIKQVWYGRTIIRSAYKLFYEAAQELLDGN
FSILDEIPEFKDLDEKSRQARLEELVWAIGKLTNIARHIRAQRDGCGALELEGVEVRVEL
DERKNIHDLIPRQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFAEL
RECAKAKGFVIDTRSNKTLADSLDKADDPNDPIVNKLLRSMATQAMSNALYFSTGSCAEE
DFHHYGLALDKYTHFTSPIRRYSDMIVHRLLMAAISKDRKEEIKENLFSNKDLEELCRHI
NNRNRAAQHSQKQSTELFQCMYFKDKDPDTEARCIADGVIYSIRTNGVLVFIPRFGIKGA
AYLKNKDGLVISCGLDSHSEWKPGSLQRCQNKITSTPTGGDPVTFHLFDHVTVRISVQAL
RCHSDTIRLEIISNKPYKMSSTELCRQSSLLLKSELVKEVTRSVEEAQLAQEIKGKVIEE
EYQEYCQSKGGSLYTLLEEIRDLALLDVSNNYRI
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaagcaggagaaggtgctgctgctgaagaccttccagggccggacgctgcgg
atcgtgcgcgagcactacctgcggccccgcgtgccgtgccacagcccgctctgcccgcag
ccctccgcctgccgcaacgatgggaagctgttgagtagtgatgtgactcattatgtaatc
ccagactggaaagttgttcaagattaccttgagatcctagagtttctggagttgaaggga
attatcttcatgcaaacagcttgtcaagctgtgcaacatcaaaggggccggagacagtat
aacaaattgcgaaacctactgaaggatgcacgccatgattgcattttgttcgctaatgaa
ttccagcagcactgctatcttcctcgggaaggaggggagcccatggagaagtggcagacc
aggagcatctacaacgcggctgtctggtactatcaccactgccaggacaggatgccggtc
gttatggtgacggaagatgaagaagccattcagcagtacggaagtgaaacagaaggagtg
tttgtgatttctttcaagaattacctggataatttttggcctgatttaaaagctgcccat
gagctctgtgactccatccttcaatcccgccgggagaaggagagtgagaatcaggagagc
cacggaaaggagtaccctgaacatcttcctgccgaggtcctggaagcaggggtcaaatca
ggatgctatgtccagggaattctgaacgtgaataaacatagagcacaaatagaagctttt
gttcgacttcaaggagccagctgtaaagattcaggtttagtgagtgacatcctcgtgcat
ggcctcaaggctcggaaccgtgccattcacggggacctggtggcggtggaactcctgccc
acacgggaatggaaaggcaggacggctgcgctgtgtgagaacgacatcgaggacaaggcc
tcaggcgagtctccaagcgagcccatgccgacaggtcgagtggtgggcattcttcagaag
aactggcgagattatgtggtaacatttccatctaaagaagaagtccaatctcagggcaaa
aatgctcagaaggttctagttactccctgggattacagaattcccaaaatccggattagc
actcagcaagcaggagccctgcaggacttcagggtagttgtacgcattgattcctgggaa
tcaacgtctgtgtatccaaatggacattttgtgcgtgttctaggaaggatcggcgatctg
gaaggggagatcgcaaccatcttggtggaaaacagcatttccgttgttcctttctctgag
gctcagatgtgtgagatgccagtgaactcgccagaaaatccctggaaggtgagtcctgaa
gaagagaaaagacggaaagacttgaggaaaacgcacctggtgttcagcattgaccccaaa
ggctgcgaggatgtggatgatgccctctccgtgagaaccttacacaatggcaacctggag
ctgggggtccacatcgcagacgtgacccattttgtggcacccaattcttacattgatgtg
gaagctaggaccagggccaccacatactacctagcagatcggcgctatgacatgctgccc
ccggtgctgagtgctgacttgtgttccctcctgggaggtgttgataggtatgctgtaagt
gtcatgtgggaactggataaaacctcttatgaaatcaagcaagtgtggtatggccgtacc
attattcgatccgcttacaaactgttctatgaagcagcccaggaacttctggacggcaac
ttcagcatcctcgacgagattccagaattcaaggacttggatgagaagagcagacaagcc
aggctggaggagttagtgtgggccatcggcaagctgaccaacatagctcgccacatccga
gcccaacgcgatggctgtggcgcgctggaactggaaggggtagaggttcgagtagagcta
gacgaaagaaagaatattcacgacctcatccccaggcagcccctggaggtgcacgagacg
gtggccgaatgcatgatcctcgccaaccactgggtagccaagaagatctgggagagtttt
cctcaccaggccctgctgcgccagcaccctcctccacaccaggagttcttcgctgagctc
cgagaatgcgctaaggcaaaaggcttcgtcatagataccaggtccaataaaacactggct
gattctctggataaggcggatgaccccaacgacccaattgtgaacaagctactgcgctct
atggccacgcaggccatgtccaacgcgctgtacttctctaccggctcctgtgcagaagaa
gacttccaccattatggtcttgccttggataaatatacccattttacttctccaataaga
agatattctgatatgattgtccaccgactattgatggcagccatttctaaagacaggaaa
gaggaaattaaagagaatttgttcagcaacaaagatctggaggaattgtgcagacatatc
aacaacagaaacagagcagcacagcactctcagaagcagtccaccgagctcttccagtgc
atgtacttcaaggacaaagaccctgacaccgaggcgcgctgcatagctgacggggttatt
tactccattagaacaaatggcgtgcttgtgtttattccaagatttgggattaaaggtgct
gcttatctgaaaaacaaagatggtttagtgatctcctgtgggctagacagccattctgaa
tggaaaccaggatcccttcaacgatgtcaaaacaaaatcacctctaccccaacaggaggg
gaccccgttactttccatttatttgaccatgtcacagtacggatatctgtacaggccctg
cgttgccactcagacaccatcaggcttgaaataatcagcaacaagccatataagatgtca
agcacagaactttgccgccagagttccctcttgctgaagagtgagctggtgaaagaggtg
acgagatccgtggaagaagctcagcttgcccaggaaatcaaaggcaaagtcattgaggaa
gagtatcaggagtattgccaaagcaagggaggcagtctctacacactcctggaggagata
agggacctagcacttctggatgtttcaaacaattacaggatctga
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