Dipodomys spectabilis (banner-tailed kangaroo rat): 122114702
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Entry
122114702 CDS
T07891
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
122114702
Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
122114702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
CarboxypepD_reg
TSP_1
I-set
Ig_2
CarbopepD_reg_2
TSP1_CFP_C
TSP1_spondin
ig
Motif
Other DBs
NCBI-GeneID:
122114702
NCBI-ProteinID:
XP_042543963
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MGGTKAWMLSFLVLEVTSVLGRQMMLNPLVRRIQPGKRTSNTFVKPAEPPESPGEWTAWF
NIDHPGGKGDYERLDAIRFYYGDRVCARPLRLEARTTDWMPAGSNGQVVHGNPREGFWCL
NQEQRPGQNCSNYTVRFLCPPGSLRGDVERIWSPWSPWSKCSAACGHTGVQTRTRTCLAE
TVSMCTEATEEGQLCVSQACRACDLTCSMGQANADCDACMCQDFMLHGVISLPGGAPTSG
ATVYLLTKTPKMLTRTDSDGRFQVPGLCPDGKSLLKVTKVKFAPIVLTMPKTSLKTATVN
AEFTRAETPYIVMNPASKARRAGQSVSLCCKATGKPSPDKYFWYHNDTLLDPSLYKHESK
LVLRGLQQDQAGEYFCKAQSDAGAAKSHVAQLTVIAPDEPPCNPIPESYLIRLPHDCFQN
ATNSFYYDVGRCPVKTCAGHQDNGIRCRDAVENCCGISRMEEREIQCHGYTLPTKVATEC
SCQRCAETRSIVRGRVSAADNGEPMRFGHVYLGGHRVSMTGYKGTFTLHVPQDTERLVLT
FVDRLQKFVNTTKVLPFNRKGSAVFHEIKMLRRKEPITLDAMETNIIPLGEVVGEDPVAE
LEIPSGAFYRQNGEPYTGKVQASVTFLDPRNISTATAAQSDLNFVTDEGDTLPLRTYGMF
SVDFRDEITAESLNAGKVKVHLDSTQVKMPQHVPTMKLWSLNPDTGLWEEEGDFKFESQR
RHKREERTFLVGNMEIRERRLFNLDVPESRRCFIKVRAYRSERFLPSEQIQGVVVSVINL
EPQTGFSSNPRAWGRFDSVITGPNGACLPAFCDDQTPDAYSAYVLASLAGEELEAVESSP
KFNPNAIGVPQPYLHKLKYRRTDHEDPRVKKTAFQISMAKPRPNSAEESNGPIYAFENLR
ACEEAPPSAAHFRFYQIEGDRYDYNTVPFNEDDPMSWTEDYLAWWPKPMEFRACYIKVKI
VGPLEVNVRSRNMGGTHRQTVGKLYGIRDVKSTRDRDQPNVSSACLEFKCSGMLYDQDRV
DRTLVKVIPQGSCRRASVNSMLHEYLVNHLPLAVNNDTSEYTMLAPLDPLGHNYGIYTVT
DQDPRVAKEIALGRCFDGTSDGSSRIMKSNVGVALTFNCVERQVGRQSAFQYLQPPAAGT
SQGRVPSSRRQQRASRGGQRRRGGVSSLRFSGVAQQPLNN
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggggggaaccaaagcctggatgttatccttcctggtcctggaagtcacctcggtgttg
gggaggcagatgatgctcaatccgttggtgagaagaatccagcctggaaagaggacctcc
aacacctttgtcaagcctgctgagcccccagagagtcctggtgagtggacagcgtggttt
aacatcgaccacccaggcgggaagggtgactatgagcgcctggacgccattcgcttctac
tacggggaccgagtgtgtgcccggcccctccggctggaggcccggaccactgactggatg
cctgcaggcagcaatggccaagtggtccatggcaatccccgagagggcttctggtgcctc
aaccaggaacagaggcctggccagaactgctccaattacactgtgcgcttcctctgtcca
ccagggtccctgcgtggagacgtggagcgcatctggagcccttggtctccctggagcaag
tgctcagcggcttgtggtcacaccggagtccagacccgcacacgcacctgcctggcagag
accgtgtcaatgtgcactgaggccacagaagagggccagctctgcgtgagccaggcctgc
agagcatgtgacctgacctgctccatggggcaggcgaatgctgactgtgatgcctgcatg
tgccaggatttcatgcttcatggggttatctccctccctgggggggcccctacctcaggg
gctaccgtctacctgctgaccaagacacccaagatgctcacccggacagacagtgatggc
aggttccaagtccccggcttgtgtccagatggcaaaagcctcctgaaggtcaccaaggtc
aagtttgcccctattgtgctcaccatgccaaagaccagcctgaagacagccactgtcaac
gcagaattcaccagggcagagactccctacattgtgatgaaccctgcgagcaaagcacgg
agagccgggcagagtgtttccctgtgctgcaaggccacgggcaagcccagtccagacaag
tacttctggtatcacaatgacacgctactggatccctccctctacaagcacgagagcaag
ctggtactgagaggtctgcagcaggaccaggctggggagtacttttgtaaggcacagagt
gatgctggggctgcaaagtcccacgttgctcagctcacggtcatagcacctgatgagcct
ccttgcaacccaatccctgagagctacctcatccggctgccccatgactgcttccagaat
gccaccaactccttctactacgatgtgggccgctgtcctgtgaagacgtgtgcggggcat
caggataacggcatccggtgtcgggatgcagtggagaactgctgtggcatctccagaatg
gaagagcgggagatccagtgccatgggtacacactgcccaccaaggtggccacggagtgc
agctgccaacggtgtgcagagacccggagcatcgtgaggggccgggtcagtgctgcggac
aatggcgagcccatgcgctttggccacgtgtacctggggggccatcgtgtgagcatgacg
ggctacaagggcaccttcaccctccatgtcccccaagacacggagaggctggtgctcacg
ttcgtcgacaggttgcagaagtttgtcaatacgaccaaagtgctccccttcaaccggaag
gggagtgctgtattccatgaaatcaagatgcttcgccggaaggaacccatcactttggat
gcgatggagaccaacatcatccccctgggagaggtggtgggcgaagaccccgtggctgaa
ctggaaatcccatcgggggctttctaccgacagaacggggagccctatacgggcaaagtg
caggccagcgtgaccttcctggaccccaggaatatttccacagccacagctgcccagagc
gatctgaactttgtcacggatgaaggggacacgctgccccttcgtacatacggcatgttc
tccgtggacttcagagatgagatcacagctgagtcacttaatgctggcaaagtcaaggtg
cacctggactccacccaggtcaagatgccgcagcacgtgcccaccatgaaactgtggtcg
ctcaacccagacacggggctgtgggaggaggaaggggatttcaaatttgaaagccaaagg
aggcacaaaagggaagagagaactttcttggtgggcaacatggagatacgtgagagacgc
ctctttaacctggacgtcccagaaagccgaagatgcttcattaaagtgagagcctatcgg
agtgagaggttcttgcccagtgagcaaattcagggtgtcgtcgtctccgtgatcaatctg
gagccccaaactggcttctcatccaaccccagggcctggggtcgctttgacagtgtcatt
acaggccccaatggagcctgtctgcctgccttctgtgatgaccaaaccccagatgcttat
tctgcctatgtcctggcaagcctggctggggaggaactagaagcagtggaatcttctcct
aaattcaaccccaacgcgatcggtgtccctcagccctaccttcacaagctcaagtaccgc
cggacggaccacgaagatccaagggttaaaaagacagctttccagatcagcatggcgaag
ccaaggcccaactctgctgaggagagcaatggacccatctatgcctttgagaacctccgg
gcctgtgaagaggcaccccctagtgcagcccacttccgcttctaccagatcgagggagat
cggtatgattataacaccgtccctttcaatgaagatgaccccatgagctggactgaagac
tatctggcatggtggcccaagccaatggaattcagggcgtgctatatcaaggtgaagatt
gtaggacccctggaggtgaatgtccgatctcgaaacatggggggcacccaccggcagaca
gtagggaagctgtatggaatccgagatgtgaagagtacaagagacagggaccagccgaat
gtctcatccgcctgtctagagttcaagtgtagtgggatgctctatgaccaggaccgtgtg
gaccgcacactggtcaaggtcattccccagggcagctgccgtcgagccagtgtgaactcc
atgctgcatgagtacctggtcaaccatcttccattggcggtcaacaatgacaccagtgaa
tacaccatgctggcacccctggatccactgggccataactatggcatctataccgtcacc
gatcaggaccctcgcgtggccaaggagattgcacttggccggtgtttcgatggcacgtct
gatggctcctccagaatcatgaagagcaacgtgggcgtggccctcacctttaactgtgtg
gagaggcaggtgggccgccagagtgcctttcagtacctccagcccccggctgcaggcacc
agccaaggaagagtgccctcttccaggaggcaacagcgggcaagcaggggtggccagcgc
cggcgaggaggggtgtcttccctgagattttctggagttgctcagcagcctctgaacaac
taa
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