Dipodomys spectabilis (banner-tailed kangaroo rat): 122115854
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Entry
122115854 CDS
T07891
Symbol
Clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04213
Longevity regulating pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
122115854 (Clpb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dsp03110
]
122115854 (Clpb)
Chaperones and folding catalysts [BR:
dsp03110
]
Heat shock proteins
HSP100
122115854 (Clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_5
Ank_3
ClpB_D2-small
AAA_5
Ank_4
AAA
Zeta_toxin
Sigma54_activat
AAA_22
AAA_24
Torsin
nSTAND3
AAA_3
AAA_14
ATPase_2
YchF-GTPase_C
ABC_tran
RP853
Motif
Other DBs
NCBI-GeneID:
122115854
NCBI-ProteinID:
XP_042545362
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MLASQMLRRSAPAPRLLLRLVRSSSLQSLGGASRRSVTTGDCGEPQWPRASAGGRPLTLS
ALLPGLGAPPSGPLGGRSETQCLAAATWGRLPIPEEILTGQDSWNGVPCRAAVGLWALAM
ALVVDCYTKNPNSKDAALMEAARANNVPEVTRLLSEGADVNARHKLGWTALMVAAISRND
SVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEDGGQDGASWRVTKQWTSALEFRRWL
GVPVGVLVTREDDFNNRLNNRASFKGCTALHYAVLADDFRTVKELLDGGANPVQRNEMGH
TPMDYAREGEVMKLLKTSESKYMEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAA
IRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEV
AKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGK
GKTIDCKDAIFIMTSNVASEEIAQHALQLRQEALELSRNRIAENLGDVQMSDKITISKNF
KENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLL
WDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDSDKQL
LKSPEMPSPQAEKRLPKLRLEIIDKDSKTRKLDIRAPLHPEKVCHTI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgctggcatcccagatgttgaggaggtcggcgccggcgccgcggctcctcctccggctt
gttaggtcctcgtcgcttcagagccttggaggggcctccaggcggagcgtaaccaccgga
gactgcggggaacctcagtggccgagagcgtccgccggggggcgccctttaacattgtca
gctttgctccccggactcggggcacccccctcggggcccctgggaggacgctccgagacc
cagtgcctggctgccgccacgtggggacgccttcctattcctgaagaaatactcacggga
caggacagctggaatggggtcccttgcagagctgcggtgggcttgtgggccctggctatg
gcgctggtggttgattgctacaccaagaatccgaacagcaaggatgcagccctgatggaa
gctgctcgagccaacaatgtaccagaagttaccagactgttgtcagaaggcgcagatgtc
aatgcaaggcacaaacttgggtggacagcactaatggtggcagccattagccgtaatgac
agtgtggtacaggtcctgcttgctgctggggctgatccaaaccttggagatgattttagc
agtgtctacaagacagccaaagagcagggaatccattctttggaagatgggggacaggac
ggtgcaagctggcgtgtcacaaaacagtggacaagtgccctggagttcaggaggtggcta
ggagtccccgttggcgtcttggtcacccgggaagatgactttaacaaccggttgaacaac
cgtgccagcttcaagggttgcacagccctgcactatgctgtcttagctgatgacttccgc
actgtcaaagagctgcttgatggaggagctaacccagtgcagaggaatgaaatgggacat
actcctatggattatgcccgagaaggggaggtgatgaagcttctgaagacttctgagtcc
aagtacatggaaaaacagcggaagcgtgaggctgaggagcggcgccgctttcccctggag
cagcgactgaaggagcacatcattggccaagagagtgccatcgccactgtgggggctgca
atccggaggaaagagaatggctggtacgatgaagaacaccctctggtcttcctcttcttg
ggatcatctggaataggaaaaacagaactggccaagcagacagccaagtatatgcacaaa
gatgccaaaaagggcttcatccggctggacatgtctgagttccaggagcgacatgaggtg
gccaagtttattgggtctccaccaggctacattggccatgaggagggtggccagctgacc
aaaaagttgaagcagtgccccaatgctgtggtgctcttcgatgaagtagacaaggcccac
ccggatgtgctcaccatcatgctgcagctgtttgatgagggccggctgacagatgggaag
gggaagaccattgactgtaaggacgccatcttcatcatgacctccaatgtggccagtgaa
gagattgcacagcacgcgctacagctgaggcaagaagctctggagttgagccgtaaccgc
attgccgaaaaccttggggacgtccagatgagtgacaagatcaccatctcaaagaacttc
aaggagaatgtgatccgccccatcctgaaagctcacttccggagggatgagtttctagga
aggatcaatgagatcgtctactttcttcccttctgccactcagagctcatccagctagtc
aacaaggaactgaacttctgggctaagagagccaagcaaaggcacaacatcacattgctg
tgggaccgcgaggtggcagatgtgttggttgatggctacaacgtacactatggcgcccgt
tccatcaagcacgaggtagagcgccgtgtagtcaaccagctggcagcagcctacgagcag
gacctgctaccagggggctgcaccctgcgcatcactgtggaagactcagacaagcagctg
ctcaagagccctgaaatgccctcaccccaggctgagaagcgtctacccaagctgcggctg
gagatcatcgataaggacagcaagacccgaaaactagacatccgggcaccactccatcct
gagaaggtgtgccacaccatctag
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