Dipodomys spectabilis (banner-tailed kangaroo rat): 122117354
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Entry
122117354 CDS
T07891
Symbol
Ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122117354 (Ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122117354 (Ttc37)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
122117354 (Ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_12
TPR_11
ANAPC3
TPR_9
TPR_15
Sel1
Fis1_TPR_C
ARM_TT21_5th
ARM_TT21_C
TPR_5
ARM_TT21_2nd
DUF7708
Sey1_3HB
TPR_30
Retrotran_gag_2
TPR_3
BTAD
TPR_20
HrpB1_HrpK
TPR_6
Motif
Other DBs
NCBI-GeneID:
122117354
NCBI-ProteinID:
XP_042547032
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKDDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHLEVARTWHKLIKTRQEEGADKQELHQLWRKLTQLLAESTEDENNETQQ
LLLTAFENALVLSDTIPSEDHQMLYKHFIQCLSKFPHEAARLKKACEGMINIYPTVQYPL
EVICLHLIESGNLTDEGHQYCCKLVEMNSKSGPGLIGLGIKAIQDKKYDDAISNLTEGLK
ASPLCIAGWYHLAEAQVKMHRPKEAVLSCNQALNHIGNISASGGSFYQKNLCLRLKAEAL
INLSDCESSEEAIHTLDQVSDANNVPELLVLKGLAYLNKGSLDEATKIMEDLLSSYPDLA
KAHALEALIHFTKKDYVQAEKCFHRALEKDAEVAEYHYHLGLTYWFMGEETRKDKSKALT
HFLKAARLDTYMGKVFCYLGHYYRDIVGDKTRARGCYRKAFELDDTDAESGAAAVDLSVE
LEDMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFIKASELNPDSIYSVCKVAAIQQILGKYKEAIAQYQLIIA
KKEDYVPALKGLGECHFMMAKAALVDYLDGKAVNYIEKALEYFTRALQHRADVSCLWKLV
GDACTSLHAVSSSKVNVNVLGIFLGQKDGKQTLKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYHQAQHLAEIDSNTNDVKELLEKSLHCLKKAVRLDSSSHLYWNALGVVACYSGV
ENYALAQHCFIKSIQSEQVNAVAWTNLGVLYLINENIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETIGSYDTMDLFRHTTELRMHTEGAIGYAYWVCTTLQDKSNRETELYQYNILQMN
AIPAAQVVLCKYVERIQNYAPAFTMLGYLNEHLQLKKEAAEAYQRAILLLQTGEDQDIYH
AAVRNYGRLLCSIGEYDKAIQAFKSTPLKDLEDIIGFALALFMKGLYKESNQAYERALSV
VESEQDKAHILTALAITEYKQGKMDVAKSLLFKCSILKEPTTESLQTLCALGLAMQDATL
SKAALNELLKHVKHKSSDYQRCLLTSAIYALQGRNVAVQRQASKAVHSNPADPALWSLLS
RVVAQYAQRNAKGGAIAGNVAHILDSNHGKKALLYTAVNQLAMGSSTGEDEKNTALKTIQ
KAAFLSPGDPAVWAGLMAACHADDKLALVNNTQPKRMDLYLALFSAVSASIKDKEFLENY
NQCLEKWSLLQAVTGLMDTGRISEAESLCTKNLKNHPDQPAIILLLRQVQCKSLLESQKP
LPDAVLEELQKTVMSNSTSVPAWQWLAQVYQSQGMMSAAEMCYRKSLQVASQQSSWSGKL
SSLLKLALLALEVCMANISSDHWPSLVQEATTEAMKLCFCPLAVLLQALLQFNLKMGARE
TRRLLERVVYQPGYPKSIVSTARWYLLRHLYAKNDYELIDVLVKNAETHKDRRALELNQK
LSSQ
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaagaggtgaagactgctttaaaaagtgcaagagatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagacagtcttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagctgagctagaacaacctgatcaggcccag
ggggcttataagaaagctgctgaactagagccagatcaattactagcttggcagggctta
gcaagcttgtatgaaaagtgtaaccacataaatgccaaggatgacttacctggtgtttac
caaaagctcctggatctttatgaaagcgttgacaaacagaagtggtgtgatgtctgtaag
aaacttgtggatctgtattaccaagaaaagaaacacctagaggtagcacgaacatggcac
aaattgataaagacaaggcaggaagaaggtgcagataagcaagagcttcatcaactgtgg
aggaaattgactcagttgctagctgagagcacagaggatgagaataatgaaacccaacaa
ttgcttttaactgcatttgaaaatgcactggtcttatcagatacgattcctagtgaagat
caccaaatgctttataaacatttcattcagtgtttatccaaatttccccacgaggctgct
aggttgaagaaggcctgtgaaggaatgataaacatctatcctactgtacagtatccatta
gaagtgatttgtttgcatttaattgaatcaggaaatcttactgatgaaggacatcagtat
tgttgtaaactagtggaaatgaattcaaaaagtggcccaggtctcattggcttaggtatt
aaggcaatacaagacaaaaagtatgatgatgctattagtaatttaacagaaggattaaag
gcaagccctctctgcatagctgggtggtatcatctggcagaagcccaagtcaaaatgcat
agacctaaggaagctgttctttcatgtaatcaagctctgaatcacataggaaatatcagt
gcatctggaggcagtttttatcagaaaaatctttgtcttcgtttgaaagcagaggctttg
attaatctctctgattgtgagtcttcagaggaagcaattcacacccttgatcaggtttct
gatgcaaataatgttccagaacttttggttctcaaaggtttggcctatctgaacaaaggt
tcattagatgaagctacaaagattatggaagaccttctctcttcttaccctgacttagct
aaagctcatgctcttgaggctttgattcattttaccaaaaaggactacgtccaagcagaa
aagtgtttccacagagctcttgagaaagacgctgaagttgctgaatatcattaccatctg
ggactaacctattggtttatgggtgaagagacaaggaaagataaatcaaaggctcttacc
cactttctgaaggctgcaagactggatacatacatgggcaaggttttctgctatttaggt
cattattatagagatatagtgggtgacaaaaccagagcccgtggatgttatagaaaagca
tttgaattggatgacaccgatgctgaatctggagctgcagcagttgacttaagtgtggag
ctagaggatatggaaactgccttagctatcttaacaacagtaactcaaaaagcaagcgct
ggaacagcgaagtgggcctggcttaggcgaggactgtactatttgaaagctggtcaacat
tctcaagcagtggctgacttacaggcagccttaagggcagacccaaaggacttcaactgt
tgggagtctttaggagaggcatacttaagcagaggtggttatacaactgctttgaagtcc
ttcataaaagccagtgaactgaacccagattccatatacagtgtgtgtaaggttgcagca
atacagcaaatcctaggcaagtataaggaggcaatagcccagtaccagctgatcattgcc
aagaaggaagattatgtgcctgccttgaaaggcttgggcgagtgtcattttatgatggct
aaggcagctctagttgattaccttgatggcaaagctgtaaactacatagaaaaagctctg
gaatattttactcgggccctgcaacatcgagctgatgtatcctgcctttggaagctagtt
ggggatgcttgcaccagcctgcatgcagtttcatcatctaaagtgaatgttaatgtttta
ggaatttttcttggtcagaaagatggaaaacaaacattaaagaaaaatgagctcctccat
cttggaggaaggtgttatggtcgggcattaaaattgatgtctacatctaatacctggtgt
gatcttggaattaattattatcaccaagcacagcatctggcagaaatagacagcaacaca
aatgatgttaaagaattgctggagaagtctttacattgtctgaaaaaggcagtgagactc
gacagtagcagtcacttatactggaatgcacttggtgtcgttgcatgttacagtggtgtt
gaaaattatgcccttgctcagcactgtttcatcaaatccatccagtcagaacaagttaat
gctgttgcctggaccaacttgggagtgctgtatctcataaacgaaaacattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccatcttatttaatgtgctggattgga
caagctcttattgcagagacaattggaagttacgacaccatggatctttttaggcacact
acagaactcaggatgcatactgagggagcaataggttatgcatattgggtctgcacaaca
ttgcaagataaaagcaacagagaaacagagctgtaccagtacaacatcctccagatgaat
gctattccagcagcacaagttgttttgtgcaaatatgtggaaagaattcagaattatgct
ccagcttttacaatgttgggttacttaaatgaacatctacaactgaaaaaggaagcagca
gaagcataccaaagggcaattttgttgttacagactggagaagatcaagatatttaccat
gctgcagtaagaaattatggaagattattatgttccattggtgaatatgataaagctatc
caagcttttaagtcaacaccccttaaagacttagaagatatcataggttttgcattagcc
ttgttcatgaaaggactgtataaagagagcaatcaagcctatgaaagagccttgtctgtt
gttgaatcagagcaagacaaagcccatatcttgacagctctagcaataacagaatataaa
caagggaaaatggatgtagccaagtcactgctattcaagtgctctattttaaaggaacca
actacagaaagccttcaaaccctgtgtgccctagggttggcaatgcaagatgctacgctg
tccaaagcagcacttaatgagttactgaagcatgtcaaacacaaaagtagtgattatcag
agatgtcttcttacttcagcaatttatgcactccagggccgcaatgtagcagtacaaaga
caagcttcaaaagctgtccacagtaacccagctgaccctgctctttggtctttgttgtcc
cgagttgttgctcagtatgctcaacgaaatgcaaagggaggtgctatagcaggaaatgtg
gctcatattttggactcaaatcatggaaagaaggcattgttgtacactgcagtaaatcag
ttggcaatgggaagcagtacaggagaagatgaaaaaaatactgcactgaagaccattcag
aaggcagctttcctttctccaggtgaccctgctgtctgggctgggctgatggcagcctgt
catgctgatgacaaactagctctagttaacaacactcagccaaagaggatggatttatac
ttggcattgttctctgctgtttctgcttcaattaaggacaaagaatttcttgaaaattac
aaccaatgtcttgaaaaatggtctcttttacaagctgtcactggtctcatggacacagga
agaatatctgaagctgaatctctatgtacaaagaatttaaagaatcaccctgatcagcca
gctattatcttacttttgagacaagttcagtgtaaatcactcctagagtcacaaaagcct
cttccagatgctgtgcttgaagaacttcagaaaacagtaatgtccaactcaacctctgtt
ccagcttggcaatggctggcacaggtctatcagtcccaaggaatgatgagtgctgcagag
atgtgttacagaaagagtctacaagtggcatcccaacagagcagttggagtgggaagctc
tcaagtctgttgaaactagcactgcttgcattagaagtgtgtatggctaatatttctagc
gatcactggccatctctagttcaagaagctacaactgaggccatgaaactttgcttttgt
ccattggctgtccttctgcaagctttattacagttcaacctcaaaatgggggcaagagag
acacgacgccttttggagagagtagtgtatcagcctggatatcccaaatctattgtttca
actgcacgttggtacctattgagacacctgtatgccaaaaacgactatgagctcattgat
gtgttggtaaagaatgctgaaactcataaggacagaagggcattggaactgaatcagaaa
ttgtcctcccaataa
DBGET
integrated database retrieval system
