KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122118888
Entry
122118888         CDS       T07891                                 
Symbol
Tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122118888 (Tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dsp03400]
    122118888 (Tdp1)
DNA repair and recombination proteins [BR:dsp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     122118888 (Tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 122118888
NCBI-ProteinID: XP_042548796
LinkDB
Position
Unknown
AA seq 616 aa
MTQESSYGRWTISSSDESEDEKPPRPPLEKPCTSSLPHAQQGARNEPKYTCSEARKAAHR
RQTSPVKFSNTESVSPPKKQKSGSQEDLGWCLSSSDDELQPGWQEQQQPQAKNMLVKEEK
DISSPKPGAAPKAPDLGPPASHRLREEKDEYETSGEGQDIWDMLDKGNPFQFYLTRVSGI
KAKYNCKALHIKDILSPLFGTLVSSAQFNYCFDVDWLIRQYPPEFRKKPILLVHGDKREA
KAHLHAQAKPYGNVSLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIREDWHQKTQ
GIWLSPLYPRIDPGAHSCGDSRTHFKADLIRYLLAYNDPALQEWINTIQEHDLSETNVYL
IGSTPGRFQGSHKDNWGHFRLRKLLKEHVSPIPKAECWPIVGQFSSIGSLGADESKWLCS
EFKESLVTLGEQSKMPGKSVTPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQGWLH
SYFHKWSAETSGRSNAMPHIKTYLRTSPDFSKIAWFLVTSANLSKAAWGALEKNGTQLMI
RSYELGVLFLPAAFGLDSFKVKEKFFSGSREPTGKPPFPVPYDLPPELYGSKDRPWIWNI
PYVKAPDTHGNMWVPS
NT seq 1851 nt   +upstreamnt  +downstreamnt
atgactcaggaaagcagttacgggaggtggaccatatccagcagtgatgaaagcgaggat
gagaagcccccacgacctccattggagaagccatgcacatcttctctcccccatgctcag
cagggagccaggaatgagccaaaatacacctgctccgaggctcggaaagctgcgcacaga
agacagacctcacctgtgaaattcagcaacacagaatcggtttcacctcccaagaagcag
aagagtggttcccaggaagacctaggctggtgtctgtccagtagtgatgatgagctgcag
ccaggatggcaggagcagcagcagcctcaggccaagaacatgctggtcaaagaagaaaag
gacatctcctctcccaaacctggtgctgcccccaaagccccagatcttggccctcctgct
agccacaggctcagagaggaaaaagatgagtacgagacatcaggggaaggccaggacatt
tgggacatgctggataaagggaatcctttccagttttacctcactagagtctcaggaatt
aaggcgaagtacaactgcaaagccctgcacatcaaggatattttatctcctctatttggg
acgcttgtttcttcagctcagtttaactactgctttgatgtggactggctcataaggcag
tatccacccgagttcaggaagaaaccaatcctgcttgtgcatggcgataaacgcgaggct
aaggctcacttgcatgcccaggcaaagccttatggaaacgtttccctctgtcaggcaaaa
ctggatatagcatttggaacccatcacacgaaaatgatgctcttgctgtatgaagaaggc
ctccgcgtcgtcatccacacctccaacctcatccgagaggactggcatcagaaaacccaa
ggaatctggttgagccccttgtatccacgaattgaccctggagcccacagttgtggagat
tccagaacacattttaaagctgatcttatccgttacttgctggcttacaatgaccctgct
ctccaggagtggatcaacaccatccaggagcatgacctctctgagacgaatgtttacctt
attggttcgactccaggacgctttcaaggaagccataaagataattggggacattttagg
cttaggaagcttctgaaggaacatgtctcacctatacctaaagctgagtgctggcctata
gtgggccagttttcaagcattggctcgttgggggctgatgagtccaaatggttgtgttct
gagttcaaggagagcttggtcacactgggggagcaaagcaaaatgcccggaaaaagtgtc
actcctcttcatttgatctatccttctgtggaaaacgtgcggaccagcttagaaggatac
cctgccgggggctctcttccttacagcatccagacagcagagaaacaaggctggctgcat
tcctactttcataagtggtctgctgagacatctggccgcagcaatgccatgccacatatc
aagacatatctgaggacttcgccggacttcagcaaaattgcctggttccttgtcacaagt
gccaatctgtccaaggccgcctggggagctctggagaagaacggcacccagctgatgatt
cgctcctatgagctcggcgtccttttcctccctgcagcgtttggcctggacagcttcaaa
gtaaaggagaaattcttctctggaagccgggagccaacaggaaagcctccctttcctgta
ccatatgacctgcccccggaactgtatgggagtaaagatcggccatggatctggaatatt
ccttacgtcaaagcaccagacacacacgggaacatgtgggtaccctcctga

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