Dipodomys spectabilis (banner-tailed kangaroo rat): 122119393
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Entry
122119393 CDS
T07891
Symbol
Smg8
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122119393 (Smg8)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
122119393 (Smg8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
122119393
NCBI-ProteinID:
XP_042549396
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MAGPVSLRELLMGASAWMGSESPGASPTEGGGTVAGASEPPWREDEICVVGIFGKTALRL
NSEKFSLVNTVCDRQVFPLFRHQDPGDPAPGIKPEAGAVEEAGGAGDPGAASGDPVRGTS
AATEGNRTEPGSQDFSLLQAYYNQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGLSL
PHAEAHEFWKHQEKLQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGLRQKVLPL
LKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRSQDTAHPDKPKKHSPKRRL
QHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVPGCQEEDPVGMLLDQLRSHCT
VKDPDSLLVPTPLSGPRRYQVMRQHSRQQLSFHIDSTSSSSSGQLVDFTLREFLWQHVEL
VLSKKGFDDSVGRNPQPSHFELPTYQKWISAAAKLYEVAIDGKEEDLGSPTGEITSKILS
SIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHAR
GPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGEKPEADRNPPVLY
HNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTPDP
APAKNESSPAPPDSDADKLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPADPQAGGDNP
EVHGQGEVKPEKRPNLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKSYNFH
TGLDQQGFIPGTNYLMPWDIVIRTRADDEGDLDTNSWPAPNKAIPGKRSAIVMGRGRRRD
DIARAFVGFEYEDSRGRRFMCSGPEKIMKVMGSGPKESALKALNSDMPLYILSSSQGRGL
KPHYAQLMRLFVVVPDAPLQIVLMPQVQPGPPPCPVFYPEKQEITLPPDGLWVLRFPYAY
VTERGPCFPPKENVQLMSYKVLRGVLKAVTQ
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcctgtcagcttgcgagagctgctcatgggagcctcggcctggatgggctcg
gaaagcccgggagcgtctcccacagaaggcggaggcaccgtagctggcgcatcggagcct
ccgtggcgagaggatgagatctgcgtggtgggaatcttcggcaagacggctctgcgcctc
aattccgagaagttttctcttgtgaacaccgtgtgcgaccggcaggttttccccctcttt
cgccatcaggatccaggggatccagcgcccggaatcaagccggaagctggcgccgtcgag
gaggccggtggagctggggacccaggtgctgcgtccggggatccggttcggggaacttca
gctgctacggaaggtaatcggactgagccgggttcccaggacttcagccttttgcaggcc
tattacaatcaggaaagcaaagttctctatcttcttctcacttccatctgcgacaattca
caacttctgcgggcatgtagggcccttcagagcggtgaagctggaggaggcctgtctttg
cctcatgccgaagctcacgagttctggaagcatcaggagaagttacagtgcctcagtctc
ctttaccttttctccgtctgtcatatcttgctgttggtccatcctacttgttcctttgac
atcacttatgatcgagttttcagagccttggatgggctgagacaaaaagtactgcccctc
ctcaaaacagccattaaggattgcccagtcggaaaagactggaagctaaactgccggcct
tgcccacctagacttcttttcctctttcaattgaatggagccctcaaggtggaacccccg
cggagtcaagatacagctcatccagacaaacccaagaagcattcacccaagagaagactg
cagcatgcactggaggaccagatctatagaatcttccgcaagagtcgagtcttgactaat
cagagtatcaactgcctctttactgtacctgccaaccaagcatttgtgtacatagtccct
ggatgccaagaggaggacccagtaggcatgttactggaccaacttaggagtcattgtaca
gtgaaggaccctgactccttgctggtgcctacacccctttctgggcctaggcgataccag
gtgatgaggcagcatagcagacaacaactttccttccacattgatagcaccagctccagt
tcttcgggccagctagtggattttactcttcgggaattcctatggcagcatgtggagctg
gtcctaagcaagaaaggttttgatgacagtgtaggcaggaaccctcagccatcccatttt
gaacttcccacttaccagaagtggatctcagcagctgcaaagctgtacgaagtggctatt
gatgggaaagaagaggacttggggtcacccactggggagataacgtctaagattttaagc
agtattaaagtcttggaagggtttttggatatcgacacaaaattctcagaaaaccggtgt
cagaaagctttacccatggctcatagtgcctaccagtcaaatttgcctcataattacaca
atgacagtccataagaatcagcttgcccaggctcttcgagtgtacagtcaacatgctaga
ggtccagcctttcataaatatgccatgcagttacacgaggactgctacaagttttggagc
aatggccaccagctctgtgaagagagaagtttaactgatcaacactgtgtacataaattt
cactcattacctaagtcaggagaaaaacctgaggctgatagaaatccccctgtgctgtat
cacaatagccgagctcgatccactggtgcctgtaactgtggaaggaaacaagcacctcga
gatgatccctttgatattaaggcagctaactatgacttctatcagcttctggaagaaaaa
tgttgtgggaagttggatcatatcaattttccagtatttgaaccaagtactccagatcct
gctcctgctaaaaatgagtcctctcctgcccctccagattcagatgctgataagcttaaa
gaaaaagaacctcaaactcaaggagagagtacaagcctgagtttagctttaagtttgggc
cagtccacagatagcttaggtacttacccagctgatccacaagcaggaggagacaaccca
gaagttcatggtcaaggggaagtaaaacctgagaagagaccaaacttggttgatcgacag
gcatccacagttgaatatcttccaggaatgctacattcaaattgcccaaaaggtctccta
cccaaattctcaagttggtctttggttaaactaggtcctgctaagtcttataactttcat
acaggtttggaccaacagggcttcattccaggaacaaactatctaatgccttgggacatt
gtcattaggactagagctgacgatgaaggagacttagacacaaattcatggcctgctcca
aataaagctattcctggaaaaagaagtgccatcgtaatgggaagaggaagacgacgagat
gacatagctcgagcttttgtgggctttgaatatgaagattctcgaggtcggagatttatg
tgctcggggcctgaaaaaataatgaaagtgatgggcagtggaccaaaggaatcagcttta
aaagctctaaatagtgatatgcccttatatattctgtcatcatctcagggcagaggtcta
aagccacattatgctcaacttatgagactttttgttgtggttccagatgctcctttgcag
atagtactcatgcctcaggttcagccaggtccaccaccatgtccagtattttatccagaa
aaacaagaaatcactcttcctcctgatggcctttgggtcttgagatttccttatgcatat
gtgaccgagagaggaccttgtttccctcctaaggaaaatgtacagttaatgagttataag
gtgctccgtggagttcttaaagctgtgacacaataa
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