Dipodomys spectabilis (banner-tailed kangaroo rat): 122120608
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Entry
122120608 CDS
T07891
Symbol
Taf1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122120608 (Taf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dsp01001
]
122120608 (Taf1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsp03021
]
122120608 (Taf1)
03036 Chromosome and associated proteins [BR:
dsp03036
]
122120608 (Taf1)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
122120608 (Taf1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122120608 (Taf1)
Protein kinases [BR:
dsp01001
]
Serine/threonine kinases: Other
TAF1 family
122120608 (Taf1)
Transcription machinery [BR:
dsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122120608 (Taf1)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
122120608 (Taf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Opi1
Motif
Other DBs
NCBI-GeneID:
122120608
NCBI-ProteinID:
XP_042550776
LinkDB
All DBs
Position
Unknown
AA seq
1872 aa
AA seq
DB search
MSDTESDEDSALDGPFSLTGFLFGNINGAGQLEGESVLDDECKKHLAGLGALGLGSLITE
LTANEELTGTDGALVNDEGWIRSTEDAVDYSDINEVAEDESRRYQQTMGSLKPLCHTDYD
EDDYDADCEDIDCKLMPPPPPPPGPIKKDKDQDAISDVSEDGEGIILPSIIAPSSLASEK
VDFSSSSDSESEMGPQEVAQAECEDGKLTLPLAGIMQHDATKLLPSVTELFPEFRPGKVL
RFLRLFGPGKNIPSVWRSARRKRKKKHRELIQEEQIPEVESSVEVEMSQKSLWNYDYAPP
PPPEQCLSDDEITMMAPVESKFSQLTGDTDKVMDTKPRVAEWRYGPARLWYDMLGVPEDG
SGFDYGFKLRKNEHEPVIKCRMMEDLKKLEESNGIDLLADENFLMVTQLHWEDDIIWDGE
DVKHKETKPQRASLAGWLPSSMTRNAMAYNVQQGFTATLDDDKPWYSIFPIDNEDLVYGR
WEDNIIWDAQAMPCLLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKESKKESSLKKSR
ILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEYYYPKQQGLRGTFGGNIIQHSIPAVELR
QPFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHAVQPLLKHIKKKAKMREQERQASGG
GEMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYYKRKPGKDPGAPDCKY
GETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQSYYIRELVDI
FVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSE
SSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLK
DAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGC
GEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKK
LSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSS
TELLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLAAGSA
GGGNNHRDDDTASVTSLNSSATGRCLKIYRTFQDEEGKEYVRCETVRKPAVMDAYVRIRT
TKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPD
LKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVE
GTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRT
DPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLY
PSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLL
DDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISK
HKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDIC
TAKEAALEEADLESLDPMTPGPYTPQPPDLYDTTTSLSVSRDASVFQDESSLSVLDIPTA
TPEKQVIQEGEDGNDAVADEEEGTVQQPQSSVLYEDLLMSEGEDDEEDAGTDEEGDNPFS
AIQLSESGSDSDVGTSGIRPKQPRMLQENTRMGMENEESMMSYEGDGGETSHGLEDSNIS
YGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEQRSGPSVLSQVHLSEDEEDSEDFH
SIAGDSDLDSDE
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacacggagagcgacgaagattctgcacttgatggcccattttctttaaccggt
tttcttttcggcaacatcaatggagctgggcagctggaaggggaaagcgtcttggatgat
gagtgtaagaagcacctagcaggcctgggtgctttgggtctaggcagcctgatcactgaa
ctcactgccaatgaagaattgactggaacggatggtgccttggtaaatgatgaaggctgg
attaggagtacagaagatgctgtggactattcagatatcaatgaggtagcagaagatgaa
agccgaagataccagcagacaatgggaagcttgaagcctctttgccacacagactatgat
gaagatgactatgatgctgattgtgaagacattgattgcaagctaatgcctcccccacct
ccacccccaggaccaataaagaaagataaagaccaggatgctattagcgatgtgtctgaa
gatggagaaggcatcatcttgccctccatcattgccccttcctctttggcctcagagaaa
gtggacttcagtagttcctctgactcagaatctgagatgggacctcaagaagtagcacag
gcagaatgtgaggatggaaagctgactctaccattggcggggattatgcagcatgatgcc
acaaagctgttgccaagtgtcacagaactttttcctgaatttcggcctggaaaggtatta
cgcttcttacgtctttttggaccagggaaaaatattccatctgtttggcggagtgctcgg
agaaagagaaagaagaagcaccgtgaactgatacaggaagagcagatccctgaggtggag
tcctcagtagaagtagaaatgagccagaaatctttgtggaactatgactatgctccacca
ccacctccagagcagtgtctttctgatgatgaaatcacaatgatggctcctgttgagtcg
aagttttcccagttaactggagatacagataaagtgatggatacaaaaccaagagtggct
gagtggcgttatgggcctgctcgactgtggtatgacatgctgggtgtccctgaagatggc
agtgggtttgattatggcttcaaactgagaaagaatgagcatgaacctgtgataaaatgc
aggatgatggaggatttaaaaaagcttgaagaaagcaatggaattgatcttctggctgat
gaaaattttttgatggtgactcaactgcattgggaagatgatatcatctgggatggggag
gatgtcaaacataaagagacaaaacctcagcgggcaagcttggcaggatggcttccttca
agtatgacaagaaatgccatggcttacaatgttcagcaaggttttacagctactttggat
gatgacaaaccttggtattccatttttcccattgacaatgaggatttggtatatggacgc
tgggaagataatatcatttgggatgctcaagctatgccctgcttgttggaacctcctgtt
ttgactcttgatcccaatgatgagaatcttattttagaaattcctgatgagaaggaagaa
gccacttctaattctccctccaaagaaagtaagaaagaatcatctctgaagaagagtcga
atcctcttggggaaaacgggagttattaaggaggaaccacaacagaacatgtctcaacca
gaagtaaaagatccatggaatctctcaaatgatgagtattactaccccaaacaacaaggc
cttcgagggacttttggagggaatattatccagcattcaattcctgctgtggaattacgg
cagcccttctttcctacccacatgggacccatcaaactccgacagttccatcgtccacca
ctgaagaagtattcctttggggcactatctcagccaggcccccatgcagttcagccttta
ctaaagcacatcaaaaagaaagccaagatgagagaacaagagagacaagcttcgggtggt
ggagaaatgttttttatgcgcacacctcaggaccttacaggcaaagatggagaccttatt
cttgcagaatacagtgaggaaaatgggcccttaatgatgcaagttggcatggcgaccaag
ataaaaaactattacaaacgaaaacctggaaaagatcctggagctccagattgtaaatat
ggggaaactgtttactgccatacatcaccttttctgggctctctccatcctggccagtta
ctacaggcttttgagaacaacctttttcgtgctccaatttatctgcataagatgccagaa
actgacttcttgatcattcgaacaagacagagttactatattcgggaactggtggatatt
tttgtggttggccagcagtgtcccttgtttgaagttcctgggcccaactcaaaaagggcc
aatacacatattcgagactttctacaggtttttatttatcgcctcttttggaagagtaaa
gatcggccacggcgaatccgaatggaggatataaaaaaagcctttccttcccattcagaa
agcagcatcagaaagaggctaaagctttgtgctgacttcaaacgcacagggatggactca
aactggtgggtattgaagtctgattttcgtttaccaacagaagaggagattagagctatg
gtatcaccagaacagtgctgtgcatattatagcatgatagctgcagagcagcgattgaag
gatgctggctatggagaaaagtcattttttgctccagaagaagaaaatgaggaagatttc
caaatgaagattgatgatgaagttcgaactgctccttggaataccacaagagctttcatt
gctgccatgaagggaaaatgtctactggaggtgactggtgtggcagatcccacaggctgt
ggtgaaggattctcctatgtgaagattccaaacaaaccaacacagcagaaggatgataag
gagcctcagccagtgaagaagactgtgacaggaacagatgcagaccttcgtcgcctttct
ttgaaaaatgccaagcaacttctccgtaaatttggtgtgcctgaggaagagattaaaaaa
ttgtcccgttgggaagttattgatgtggtacgcacaatgtcaacagaacaagcccgttct
ggagaggggcccatgagtaaatttgcccggggatcaaggttttctgtggctgaacatcaa
gagcgttacaaagaggaatgtcagcgcatctttgaccttcaaaacaaggttttgtcatca
acagaactattgtcaactgacacagacagcagctcagctgaagatagtgactttgaagaa
atgggaaaaaatattgagaatatgttgcagaacaagaaaaccagctctcagctatcacgt
gaacgggaggaacaggagaggaaggaactacagcggatgctacttgctgcaggctcagca
ggaggaggaaataatcacagagatgatgacacagcttctgtgacgagccttaactcctct
gccactggccgctgtctgaagatatatcgcacttttcaagatgaagagggtaaagagtat
gttcgatgtgagacggtccgaaaaccagctgtcatggatgcctatgtgcgcatacggacc
acaaaagatgaagaattcattcgaaaatttgccctttttgatgagcagcatagagaagag
atgcgaaaagaacggcgaaggattcaggagcaactgaggcggcttaaacggaaccaggaa
aaggaaaagcttaaaggtcctcctgagaagaagcccaaaaaaatgaaggaacgccctgac
ctaaaactaaaatgtggagcctgtggtgccattggacacatgagaacaaacaaattctgc
cccctttattaccaaacaaatgctccaccttccaaccctgttgctatgactgaggagcag
gaggaagagttggaaaagacagtcattcataatgataatgaagaacttatcaaggttgaa
gggaccaagattgtgttagggaaacagctaattgagagtgcggatgaagttcgcagaaaa
tctctggttctaaagttccctaaacaacagcttcctcccaaaaagaaacgacgggttgga
accacagttcactgtgactatttgaacagacctcataaatctatccaccggcgccggact
gaccctatggtgacactatcatctatcttggagtctatcatcaatgacatgagagacctt
ccaaatacataccctttccacactccagtcaatgcaaaggttgtaaaagactactataaa
atcatcactcgaccaatggacctccaaacacttcgtgaaaatgtgcgcaaacgcctctac
ccatctcgggaagagtttagggaacatttggagctaattgtgaaaaatagtgcaacctac
aatgggccgaaacactcattgacccagatttctcagtccatgctggatctctgtgatgaa
aagcttaaagagaaagaagacaaattagctcgtttagagaaagcaatcaatccgttgcta
gatgatgatgaccaggtggcattttctttcattctggacaatattgtaactcagaaaatg
atggcagttccagattcttggccatttcatcacccagttaataagaagtttgttccagat
tattataaagtaatcgtcaacccaatggatttagagactatacgtaagaatatttccaag
cacaaataccagagtcgggagagctttctagatgatgtaaaccttattctggccaacagt
gttaagtacaatggtcctgagagtcagtatactaagactgctcaggagattgtgaatgta
tgttaccagacattaaccgagtatgatgaacatctgactcaacttgaaaaggatatttgt
acagctaaagaagctgctttggaggaagcagacttagaaagtctggacccaatgacgcca
gggccctacacacctcagcctcctgatttgtatgatactaccacatccctcagtgtgtct
cgagatgcctctgtatttcaagatgagagtagtctgtctgttctggatattcccactgct
acaccagaaaagcaggtaatacaggaaggtgaagatggaaatgatgctgttgcagatgaa
gaagaaggaactgtgcaacagcctcaatctagtgtcctttatgaggatttgcttatgtcc
gaaggagaagatgatgaggaagatgctggaactgatgaagaaggcgataaccctttctct
gctattcagctgagtgaaagtggaagtgactctgatgtgggaaccagtggtataagaccc
aaacagccccgcatgcttcaggagaacacgaggatggggatggaaaatgaagaaagtatg
atgtcctatgagggagacggtggggagacttctcatggtttggaagatagcaacatcagt
tatgggagctatgaggagcctgatcccaagtcgaacacccaagacacaagcttcagcagc
atcggtgggtatgaggtatcagaggaggaagaagatgaggaggaagagcagcgctctggg
ccaagtgtactaagccaggtccacctgtcagaggacgaggaggacagtgaggatttccac
tccattgctggggacagtgacttggactctgatgaatga
DBGET
integrated database retrieval system
