Dipodomys spectabilis (banner-tailed kangaroo rat): 122122230
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Entry
122122230 CDS
T07891
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122122230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsp03041
]
122122230
03036 Chromosome and associated proteins [BR:
dsp03036
]
122122230
Spliceosome [BR:
dsp03041
]
Complex B
Other components
Prp19-related factors
122122230
Complex C
122122230
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
122122230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT
TPR_14
Suf
TPR_16
TPR_CcmH_CycH
TPR_2
TPR_17
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
122122230
NCBI-ProteinID:
XP_042552240
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAVSTAVGKLRIPQVAKVKNKAPTLVQITAEQLLREAKERELELLPRPPQQRIADEEEFN
DYKLRKRKAFEDNLRKNRTVIGNWIKYAQWEERLQEIQRARSIYERALDVDYRNITLWLK
YAEMEMKNRQANHARNVWDRAITTLPRVSQFWYKYTYMEELLGNMAGARQVFERWMEWQP
EEQAWHSYIKFELRYKEVERARTIYERFVLVHPRVNNWITYAHSEEKHGYFAHARKVYER
AVEFFGEEHMDEHLYVAFAKFEENQKEFERAQVIYKYALDRIPTHEAQELVKNYTIFEKK
FGDRRGIEAIIVSKCRFQYEEEVRASPHNYDAWFDYLRLLESTAEADTVREVYERAIANV
PPIQEKRHWKCYIYLWINYALYEELQAKDPERTRQVYQASLELIPHQEFTFAKMWLYYAQ
FEIRQRNLSSASRALGTSIGKCPKSKLFKGYIELEVKLREFDRCRKLYAKLLEFAPENCT
SWIKFAELETILGDVERARAIYELAISQPRLDMPEVLWKSYIDFEMEQGEIEKTRNLYRQ
LLQRTQHVKAWISLAHFELSAGEGSVSKCRQIYEEANKIMRNCEEKEARLMLLQSWRSFE
YEFGTVSDKERVDRLMPEKVKKRRKVQMDDWPDAGWEEYCDYIFPEDEAGSQANLKLLAM
AKLWKKQHEEQEQTDVLPELDACTVRA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccaccgcagtcgggaaactgcggatccctcaggtggccaaggtcaaaaac
aaagctccaactctcgtccagatcaccgctgagcaactgctgagggaggccaaagaacga
gagcttgagcttcttccacgtccacctcaacagaggatcgcagatgaagaagaattcaat
gactacaagctgaggaaaaggaaggcctttgaagataacttaaggaagaaccggactgtg
attgggaactggataaaatacgcgcaatgggaagaaaggctccaggaaattcagagggct
cgatccatctacgagcgtgctttagacgtggactatagaaatatcaccctctggctgaaa
tatgcagaaatggaaatgaagaatcgccaggccaaccatgccagaaatgtgtgggaccgt
gccatcacaacactgccacgagtcagccagttctggtacaagtacacatacatggaagag
ctgttggggaacatggccggtgcccggcaggtgtttgagcgctggatggaatggcagccc
gaggagcaagcctggcactcctacattaagtttgagctgagatacaaagaggtggagcgg
gcacggaccatttacgaacgctttgttcttgtgcacccgcgggtgaacaactggatcaca
tatgcccactctgaagaaaaacatggttattttgcccacgcacggaaagtgtatgagaga
gctgttgagttcttcggagaggagcatatggatgaacacctctatgttgcctttgccaaa
tttgaggaaaaccagaaagaatttgagagggcccaggtcatctacaagtatgccttggac
agaatcccaacacatgaggctcaagagctcgtcaaaaactataccatctttgagaagaag
tttggtgacaggcggggtattgaagctatcattgtgagcaaatgcagattccagtatgaa
gaggaagtgagggccagtccccacaattatgatgcgtggtttgattacttgcgcttactg
gaaagcactgcagaagctgacacagtgcgagaggtttatgagagagccattgccaatgtc
ccacccattcaggagaagagacactggaagtgttacatctacctctggatcaactatgca
ctctatgaagaattgcaggcaaaggatcctgagaggacaaggcaggtgtatcaagcctct
ttggaattaattcctcatcaagagttcacatttgccaaaatgtggctctattatgcacaa
tttgaaataagacagagaaatttatcatctgccagtagagctctggggacttccataggc
aagtgtccaaagagcaagttatttaaaggctacatagaactggaagtgaagcttcgagaa
tttgacagatgccggaagctttatgcaaagctgttggaatttgcacctgaaaattgtacc
tcctggattaagtttgcagaattagagacaatccttggtgatgtggagagagccagggca
atctatgagttagccatcagccagcctcgcttagacatgccagaggtgctttggaaatcc
tacatcgactttgagatggaacagggagaaattgagaaaacacgaaatctttaccgacag
ttgctccaacggacacagcatgtcaaggcatggatcagtttggctcactttgagttgtct
gcaggagaagggagtgtgtctaaatgcagacagatttatgaagaggctaacaaaatcatg
cggaactgtgaagaaaaggaagcgaggcttatgctgctgcaatcttggagaagctttgag
tatgaatttggaacagtatcagataaggagagagtagacagactcatgccagaaaaagtg
aagaagagaaggaaggttcagatggatgactggcctgatgcaggctgggaagaatactgt
gactacatctttccagaagatgaagctggcagccaagctaacctcaaacttctggctatg
gctaaactttggaagaaacaacatgaagagcaggagcaaacggatgtcctgcctgagttg
gatgcatgcacagtgagagcatag
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