Drosophila serrata: 110176193
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Entry
110176193 CDS
T06108
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dsr
Drosophila serrata
Pathway
dsr03022
Basal transcription factors
dsr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110176193
09124 Replication and repair
03420 Nucleotide excision repair
110176193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsr03021
]
110176193
03400 DNA repair and recombination proteins [BR:
dsr03400
]
110176193
Transcription machinery [BR:
dsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110176193
DNA repair and recombination proteins [BR:
dsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110176193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
110176193
NCBI-ProteinID:
XP_020798103
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MADTKSGRHAAASGSGTSGLTPLVQGPENLECKDFQEYLRTRQTPETLEKLYNYPPICLA
VFRELPELARQFIIRILFVDQPVPQAVVTSWGAQRFAKDQSEATSCLTALNVWRVTAIPG
GLTAWELSPTFKKSVRQVLLGGGKPWPMTNTLEKDSKPRDIAFLDTYAMSRWRCVLHYMV
GTGNRNGTDAEAISPDAVRILLHANLMKRDDRDGITITRQGFQFLLLDTRAQVWHFMLQY
LDTCEERGISLPECLSMLFQLSFSTLGRDYSSEGMNNQMLTFLQHLREFGLVFQRKRKEG
RFYPTRLALNVTSKEAAATATVATNEEEGVQDSGYIVVETNYRVYAYTDSPLQVAVLGLF
TQLLYRFPNLVVGVLTRDSVRQALRGGITAEQIVSYLEQYAHPNMRLVESAIQSKSCLPP
TVVDQIKLWEMERNRFTYTEGVVYNQFLSQTDFVTLRDYAQSIHVLVWQNERTRTMVVQK
NGHDDVKRYWKKYSKSGV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgaaatctggacgccatgcagcggccagtggcagtggcaccagtgggctt
actcccctggtgcagggaccggagaacctggagtgcaaggactttcaggagtatctgcgc
acccggcaaacgccggagactctggagaagctatacaactatccgccgatctgcttggcc
gtcttccgggagctgcccgagctggctaggcagtttatcatacgcattctgtttgtggat
caaccagtgccgcaggcggtagtcacatcctggggtgcacaacgttttgccaaggatcaa
tcggaggccacaagctgcttgacagcgttgaatgtctggcgggttaccgctattcccgga
ggcctcacagcctgggaactttcgcccacgtttaagaagagcgtgcgccaagtgctgctc
ggcggtggaaaaccgtggcccatgactaacacgctagagaaggactccaagcccagggac
attgccttcctagatacctatgccatgtctcgctggcgctgtgtcctccactacatggtg
ggaacgggaaatcgcaacggcaccgatgcggaggcaattagtccggatgctgtgcggatt
ctgctgcatgccaatctgatgaagcgtgatgaccgggatggaatcactattaccaggcaa
ggatttcagttcctgctgctggatacacgggcgcaggtgtggcactttatgctccagtat
ctggacacgtgcgaggagcgaggcatctctctgcccgaatgcctctccatgctgttccag
ctgagcttctccactttgggacgggactacagctcggagggcatgaacaatcagatgttg
accttcctgcagcatctaagagagtttgggttggtcttccagcggaaacgcaaggaggga
cgcttctatcccacccgcttggccctgaatgtgaccagcaaggaggcagcggccaccgct
acagtggccaccaatgaggaggagggcgtccaggactctggctacatcgttgtggagact
aattaccgtgtgtacgcctacacggattccccacttcaggtggctgtcctcggtctgttt
acgcagcttctctaccgcttccccaatctcgtcgtgggcgtgctaacccgcgattcggtg
cgccaggcgttgcgtggtggcatcacagcggagcagattgtctcgtatctggagcaatat
gcgcatcccaacatgcgattggtcgagtcagccattcagtcgaaatcctgcctgccaccg
acggtcgtcgatcagatcaagctgtgggaaatggagcgcaatcgcttcacctacacggag
ggcgttgtctataatcagttcctgtctcaaaccgactttgtaacgctgcgtgactacgcc
cagtcgatccatgttctggtgtggcagaacgaacgaacgcgtaccatggtcgtccagaag
aatggccatgacgacgtcaagcggtactggaagaagtactcaaagagtggtgtctaa
DBGET
integrated database retrieval system