Drosophila serrata: 110177027
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Entry
110177027 CDS
T06108
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dsr
Drosophila serrata
Pathway
dsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110177027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsr03019
]
110177027
Messenger RNA biogenesis [BR:
dsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110177027
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110177027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_1st
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
DUF4327
Motif
Other DBs
NCBI-GeneID:
110177027
NCBI-ProteinID:
XP_020799205
LinkDB
All DBs
Position
Unknown
AA seq
2527 aa
AA seq
DB search
MNVESQLKTPLTHIRNLVKHVNKRNFNETSEQIKQFAKEHGLEADRSSLRHLFSVINLGD
PAPSVTXQLQAKLLGTQLQRQLXESSFVSNICFAFDQYFASNQKSLKPAAVVDLVSHVSR
LTGINKLCECIFALAVTHSSHPELRQSARNNLQVSLVELIDSYLGKGNSNPASSGXQEIS
FDLLQYLLCCLKDYVKPQLEAEFLVKLREEFPRQXVPLVLAPFLYGSGSTTASATTTGSS
ATETDAEAEATVSSNSNSSSYEADALNEVGIEDIYDHLSEIIFTNQGKNNIMDTSWINLV
LEIGYEFTSSVEECKNHLCSRERERAELQSKDVAKIVGLMCRRHSSLLDCNVNLPTPANF
WPGQGQAQGQGSGSSSSGGSSQAQSTSQQQSSSSSSNNNDGSEGSASSDKKDKKETTEAT
QTWKPDVFVQALKEVVPQLNWKDVCMELDHPEFVIKDRIGLDLLLTILRLATGSSLFPHP
ECIYRHWANTEGQLSLIATMLKNPDLFSFADFVFSQPALDVLKTAPDADNKEISAWKSLH
LVEVLLSIADKGYYTQVHELLKFPAQNCPDVLFLALLHISPPLTPLRQDLFNQLIPTFLG
NHPNSNVILASAWSSTNFQLRPNIMNAMSEWYLRGNEFDQVKLSRILDLAQDLKALSSLL
NARSFLFIIDLACLASRREYLKLEKWLTDKIRDHGEPFMQAMIKVLLRRCPQVVNAKMPE
DQLPPKQTQLLPETVTTMINCLHTCINSCMQPEMGEMIMQMTANVAIMANKARVQQQQQP
GLVPPPPPNILRGHRGMDLPGGIVPPPPQQPFSGNLNAQMFGPGMDPLTNMSNNLAGLNL
SAPNGAFNFGNMLTSPSRLMTPGASPYPLNPMQLAQAPPPPNVGNLGRMLPGGPQQPAPT
PTPTAPNPNNPVMADLQIPVSKEVEDEVNSYFQRIYNHQPNPTLSIDEVLDXLQRFKESS
NRREQEVFLCMLRNLFEEYRFFCQYPEKELQITAQLFGGIIDRNLVPTFVALGLSLRCVL
DALRKPEGSKLYYFGVTALDRFRTRLHTYNKYCEHIRSIPHFSDFPPHLIHYVEYGMHGQ
EPPPQKLIGLSNTIPPVISTGPITEPLYRSNSMQGNMPAATPGSGPKSNVTVSHATRMKS
IANATNIDTLLVANQEEKVTIPPEPVQDKTAFIFNNLSQLNIPQKCDEIKEIMTKEYWPW
LAQYLVLKRASMEFNFHTLYYNFLEALKNCEINRFVTKETLRNIKVLLRSDXGVINFSDR
SLLKNLGHWLGMMTLGRNRPILLLDLDLKSLLAEAYHKGQQELLFVVPFVAKILESSAKS
RIFRSPNPWTMGIMYVLGELHQEPDLKLNLKFEIEVLCKTLNLELAKLRPVIYLKDPTRA
LLIEQQMSQPKPKQQDTIAPPQSLPREQQSPAQPPPQQQQQPQPQQQPPQPQAPPPAQPT
DVDAQTAAAMMMGAGGSGANSTPGSVASPNLPTDPSQVVLPPPEPRYAYVDVNVSNFQLI
AQQLVLPPNIPFLHANPGIKHIVINAVERTITDWLQPIVDRSIRIACATTEQIIRKDFAL
DADENRMRTAAHQMVRNLAAGMAMITGKDEIARAISQNLHKALXSALTGMPSLTEIQAAA
LTLASENVELVCAFIQKTSAEKAAAEIDRRLSTDFETRKIAREEGNRFVDSQILSYQQDR
LPEAVRIKVGAAPPTLFAVYSEFARSIPGFQQMSERDIALFVPKPQDLAQPNVFANDESS
MVYAEVASKMEAFMNTAINVPSLQVQASKMHMLLNALMSTRRQRDQDSAFNLLTRAVEGL
TEGLITVPEHMEQMKLYQNIHLRILSLLHNSFGAPNTERAVTKCFFDIREEVRYNVEAAR
ALITSHFVNLNQFDIMLRDCMDNGNNYVAISFGIALLERLIMEDRAINIVSDNEFMATVE
LLGRLTQHRNRYPECIVNAIEAQWSGNFNSSGDISPFNACERYLAGASHYIHSGMHHVRS
CDTDDPPGLQEKTEFLLKDWVALYTQQNQQSTRDARHFGAFVQKMNTYGILKTDDLITRF
FRQATHICTDVVYRMFAEPSLPINQAKNKIFQWIDAFVHLIAMLVRHSGEAGNPTTKINL
LNKVLGIVLGTLLKDHEMRGVSFQQXGYHRFFMMLFMELCSADVILETLMHSIVSAFAYT
YHLLNPSLAPGFCFAWLELVSHRVFLGRILVQIPGQKGWPLYAQLLQDLFKYLAPFLRNT
ELGKPVQLLYKGTLRVLLVLLHDFPEFXCDYHFGFCDTIPPNCVQMRNIILSAFPRNMRL
PDPFTPNLKVDMLSDSSNAPKVLSSYIMNIQPPNFKKDLDSYLKARAPVTFLSELRGHLQ
VTXEPGTRYNMTLMNALVMYVGTQAIALIRNKNFVPNTSNIAHSAHMDIFQNLAVDLDTE
GRYLFLNAIANQLRYPNSHTHYFSCAVLHLFAEANSEAIQEQITRVLLERLIVNRPHPWG
LLITFIELIKNPIYKFWDHDFVHCAPEITKLFESVARSCLAKSNVTQQLNMPVVVDGEGQ
EVVANIN
NT seq
7584 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagagagccaactgaagacaccgctaacgcacatacgcaatctggtcaagcac
gtgaataagcgaaattttaatgaaaccagcgagcaaataaagcagttcgccaaagagcac
ggcctggaagcggatcgcagcagcctgcgccacctgttctccgtgatcaacctcggcgat
cccgcgccgtcggtcaccngtcagctgcaggcgaagctcctgggcacccagttgcagcgt
cagttgncagaatcctcgtttgtctccaacatctgctttgcatttgaccagtactttgcg
agtaaccagaagtctcttaagcctgccgcggtagtcgatcttgttagccacgtgtcccga
ctgaccggcattaacaagctctgcgagtgcatctttgcgttggctgtgacccattcctcc
catcccgagcttaggcagtcagcgaggaacaacctacaggtgtcccttgttgagctgatc
gattcgtatttgggaaaaggcaacagcaacccggccagcagtggtntgcaggagatttcc
tttgacctgctacaatatttgctgtgctgcctcaaggattacgtgaaaccgcagttggag
gcggagtttttggtaaaacttcgcgaggagtttccgcgtcagncggtgccattggttcta
gcgccgttcctttacggctccggctcgaccacggcgtcagcgacgactacgggatcaagt
gccaccgaaacggatgcagaggccgaagcaacggtcagcagcaacagcaatagctccagt
tacgaggcagatgctctgaacgaggtgggaattgaagatatctatgaccatttaagcgag
ataatattcaccaaccagggcaaaaataatattatggacacatcctggattaatctagtc
cttgaaatcggttatgaatttacatcgagcgttgaagagtgcaagaatcatttgtgttcc
cgcgaacgcgagcgcgccgagcttcagtccaaagatgtcgccaagatcgtgggactcatg
tgccgccggcactcgtcgctcctcgattgtaatgtaaacctaccgacgccagcgaacttc
tggcctggacagggacaagcacaaggtcagggttcaggtagtagcagcagcggcggctcg
tcgcaggcacaaagtacttcgcagcagcagagctccagcagcagtagcaacaacaacgat
ggcagtgagggaagtgcgtccagtgataagaaggacaagaaggagacgacggaggccaca
cagacatggaagccagatgtctttgtgcaggccctcaaggaggtggtgccccagctcaac
tggaaggacgtgtgcatggaacttgatcaccccgagttcgtgataaaggatcgtatcggt
ttggatttgcttttaaccatcctgcgattagccacgggctccagcttattcccacatcca
gaatgcatttatcgccactgggccaacacggaaggtcagctgtcgctgattgcgactatg
ctgaagaacccggatctcttctccttcgccgactttgtgttcagtcagccagcgttggac
gtgctgaaaacggctccagatgccgacaacaaggagatctcggcgtggaagtcactgcat
ctggtggaggtgcttctctccattgcggacaagggatactatacgcaggtgcacgagctc
ttgaagttccccgctcagaattgtcccgacgtgttgttcttggccctgctgcatatcagt
ccacccctgacgccgctccgccaggatttgtttaaccaactgatacctacgttccttggc
aaccatcccaactctaacgtgatcctggccagcgcctggagctcgacgaacttccagctg
cgacccaatatcatgaacgccatgtccgaatggtatctgcgcggcaatgaattcgatcag
gtgaagctgtcccggatcttagaccttgcccaggacttgaaggcgctgtcctctctgctc
aacgcccgctccttcctattcattatcgacctggcctgccttgcctcccggcgtgagtac
ctgaagctggagaagtggctaaccgacaaaattcgcgaccacggcgagcccttcatgcag
gccatgatcaaggtgctgctacgtcgctgcccccaggtggtgaatgccaaaatgcccgag
gaccagctgcctcccaagcagactcaactcttgccggagacggtgaccacgatgatcaac
tgtttgcacacgtgcatcaacagctgcatgcagccggaaatgggcgaaatgatcatgcag
atgaccgcaaacgtggccatcatggcgaacaaggcgcgtgtccagcagcagcagcaacca
ggtctggtccccccaccgccaccaaacatcttgcgcggtcatcgcggcatggatctgccc
ggcggcattgtgccaccaccaccacagcaacccttttctggaaaccttaatgcccagatg
tttggacccggaatggatccacttacgaacatgtccaataacctggcaggcctcaacctt
agtgccccgaacggagccttcaattttggcaacatgctgacctcaccttcgcgcctaatg
actccaggagccagtccctatccactaaatcccatgcagctggcgcaggctccaccacca
cccaatgttgggaatctcggtcgaatgctgcctggtggtccccaacaaccggctcctacg
cccacgccgacggcaccgaatcctaacaacccggtaatggccgatttacagatacctgtg
tccaaggaggtggaggacgaggtgaactcatatttccaacgcatctacaaccaccagccc
aatcccacgctctctatcgacgaagttttggatnatctgcagcgcttcaaggagtccagc
aaccggcgggagcaggaggtcttcttgtgcatgctgcgcaatctgtttgaggagtaccgc
tttttctgtcaatatcccgaaaaggagttgcagatcactgcccagctgtttggcggcatc
attgatcgcaatttggtgcccacgtttgtggccctgggactctctttgcgctgtgttttg
gatgctctccgtaagcctgaaggctccaagctttactacttcggtgtgacggcactggat
agatttaggacacgactgcacacctacaacaagtactgcgagcatatccgttccattccc
cacttctcggactttccgccacacctcatccactatgttgaatacggaatgcatggtcag
gagccgccgccacagaagctgattggcctcagcaacacgattccgcctgtgatatccaca
gggccgataactgagcctctgtacaggagtaactccatgcaaggaaacatgcccgctgcc
acgcccggatcgggacccaaatcgaacgtaacggtgtcccacgccacccgtatgaagtcc
attgccaatgccaccaatatcgacaccttgctggtagccaatcaggaggagaaggtgacg
atacctccagagcccgtgcaggacaaaacggcctttatctttaataacctcagccagttg
aacatcccccagaagtgcgacgagatcaaggagattatgaccaaagagtattggccttgg
ctagctcaatatttggtactcaagcgtgcctccatggagttcaacttccataccctatac
tacaacttcctggaagctctcaagaactgcgagattaatcgcttcgtgaccaaggagacg
ctgcgcaacatcaaggtgctcctgcgctctgatnaaggagtaatcaacttctccgatcgc
agtctgctgaagaacctcgggcactggctgggaatgatgaccctcggacgcaatcgtccc
atcttgctattggaccttgatttgaagtccctgctggccgaggcatatcacaagggccaa
caagagctgctttttgtggttccctttgtggccaagattctcgaatcgtccgccaagtca
cgcatcttccgctcgcccaacccctggaccatgggcattatgtacgtactaggcgaactc
caccaggagccggaccttaagttgaacctcaagttcgagatcgaggtactttgcaagacg
ctcaatctggagcttgccaagctgcgaccagtgatctacctcaaggatcccacgcgagct
ctactcatcgagcagcagatgtcgcagccgaagcccaaacaacaggataccattgcaccg
ccacaatctttgccgcgtgaacagcaatcgccagcacagccgcctccacagcagcagcag
cagccacagccacaacaacaaccaccacagccacaggctcctcctccggctcagccgacg
gatgtggacgcccaaacggcagccgccatgatgatgggagccggcggcagtggagcaaac
agcacgcccggatcagtggcctctcccaatctgcccaccgatcccagccaggtggtgctg
cctccgcccgaaccgcgatacgcctacgtggacgtaaatgtaagcaacttccagcttatt
gcacagcagctagtgctgccacccaatattccattcctgcacgccaatccaggaattaag
catatcgtgatcaatgccgtagaacgtacgattaccgactggctgcagcccatcgtggat
cggagcattcgcatcgcttgcgccaccaccgagcagataatccgaaaggacttcgccttg
gatgcggacgagaaccgtatgcgcaccgccgcccaccagatggtccgcaacctggctgcc
ggcatggccatgataacaggaaaggacgagattgcccgtgctattagccagaacctgcac
aaggctcttntttcggcactgaccggtatgcccagcctgactgaaatccaggccgcggcc
ctgacgttggccagcgagaatgtggaactggtgtgcgcttttattcagaagacatcggcc
gagaaggcagccgccgagattgacaggcgcctaagcaccgacttcgagacacgaaaaatc
gcacgggaggagggcaatcgctttgttgactctcaaatcttgagctatcagcaggatcgt
cttccggaggcagtgcgcatcaaggttggtgctgctccacctacactgttcgcggtgtac
tctgagtttgcacgaagcattcccggctttcaacagatgagcgaacgcgatatcgccctg
tttgtaccgaagccacaggatttggcgcagccgaatgtgtttgccaacgatgagagtagc
atggtctacgccgaggtggccagcaaaatggaagccttcatgaacacggccattaatgtg
ccgtcgctgcaggtgcaggctagtaagatgcacatgctccttaacgctctgatgtcgaca
cgccggcagcgagaccaggattcggctttcaatttgctaacccgtgccgtcgaaggcttg
accgagggcttgatcactgtacccgagcacatggaacagatgaagctctaccagaacatc
catcttcgcatcctcagcctgctgcacaatagctttggtgcccccaacacggaacgagct
gtgaccaagtgcttctttgatatccgcgaggaggtgcgctacaacgtggaggcggcccgc
gccctcatcacctcacattttgtcaatttaaatcagtttgatataatgctgcgggattgc
atggacaatggcaacaattacgtggccatttcattcggcatcgctctgctggaacgtctg
atcatggaggaccgagcgattaacattgtgtcggacaacgagtttatggccaccgtggaa
ctgctgggtaggcttacccaacaccgaaatcgatatccggagtgcattgtgaatgcgatc
gaggcgcagtggagcggaaacttcaactccagcggcgacatcagtccgttcaacgcttgc
gagcgttacttggcgggagcctcccactacattcactccggcatgcatcacgtaaggtca
tgcgatacggatgatccgccaggattgcaggaaaagaccgagttcttgctcaaggattgg
gtggcattgtacacccagcagaaccaacaatccactcgagatgcccggcactttggtgct
tttgtgcagaaaatgaatacgtacggaatcctgaagacggatgacctgatcacacgcttc
ttccgtcaggccacgcacatctgcacagatgtggtataccgaatgttcgctgagcctagc
ctgcccatcaaccaggccaagaacaagattttccaatggatcgatgcatttgtgcacctg
atcgcgatgctagtgcgtcactcgggcgaggctggaaacccgacgaccaagatcaacctg
cttaacaaggtgctgggcattgtgctcggcacgctgctcaaggaccacgagatgcgtggc
gtgagcttccagcagngtggctaccatcggttctttatgatgctattcatggagctttgc
tcagcggacgttatcctcgagacgctgatgcacagcattgtgtcggccttcgcctacact
tatcacctgctgaatcccagcttggcacctggcttctgctttgcttggctcgagctcgtc
tctcatcgcgtgttcctgggccgcatccttgtccagattcctggccaaaagggctggccg
ctttatgcgcaactgctgcaggatctcttcaagtatctggcgcctttcctgcgcaacaca
gagctgggcaaaccggtacagctcctgtacaagggcaccctgcgagttctactcgttttg
ctgcacgacttcccggagttcntgtgcgactaccactttggtttctgcgacaccatcccg
cccaactgtgttcagatgcgcaacatcatcctgtccgcgttcccacgcaacatgcgcctg
cccgatccttttacgccaaacctgaaggtcgacatgctgtcggacagcagcaacgcaccc
aaggtgctcagcagctacattatgaacatccagccgccgaacttcaagaaggatctggac
tcgtacctcaaggcccgggcgccggttactttcctttcagagttgcgtggacacttgcag
gtgacangcgagccgggaacgcgctacaatatgacgctaatgaatgccctggtcatgtat
gttggcacccaagcgattgctttgattagaaacaagaactttgtgcccaatacatcgaac
attgcccacagcgctcacatggacatcttccagaacctggccgttgacttggacacggaa
ggtcgctatctgttcctgaacgcaattgctaaccagctgcgttatcccaatagccacacg
cactactttagctgtgcggtcctccatctattcgccgaggcgaactcggaggcaattcag
gagcagataacgcgagttctgctcgaacgattaatcgttaaccgcccgcatccatggggt
ctgcttatcacgttcatcgagctgatcaagaatcccatttacaagttttgggatcatgat
tttgtgcactgtgcgccagagattaccaaactatttgaatcggtggcccgatcctgtttg
gccaagtcaaacgtcacccagcagctaaacatgcccgtcgtcgtcgatggcgagggccag
gaggtggtggccaatatcaactga
DBGET
integrated database retrieval system
