Drosophila serrata: 110187017
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Entry
110187017 CDS
T06108
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dsr
Drosophila serrata
Pathway
dsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110187017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsr03041
]
110187017
Enzymes [BR:
dsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110187017
Spliceosome [BR:
dsr03041
]
Complex A
U2 snRNP components
U2 related factors
110187017
Complex B
110187017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
110187017
NCBI-ProteinID:
XP_020812038
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MSKSSGRERDRDRERERDRDRDRDRDRDNRSRDYDMVKSRNGGGGGGGNSFGSSRSGRED
RKRVKDSNSERGRRDEKRRKRSRSKDYDKEKRFDRDRDRDRERQREKEREREKEKERDRE
KDRDRDRQRDREADGRRPAAPAPLIIPVPSSSSSDEEVEEIDKEEQQRRLEQEMIKRRER
IERWRAERKRDTKAPAVAPAAVKTVKKWSLEDESEEDDSNHAPSLDSGKKDAEPDSPPSK
FHSIRKRFDDDAVEPKFSPMKRPTFSKAFGAKLVMGLSPKTEVEIKKETPVAELKEVKKE
PQSEPEPAESVPAAPVQMETVEVKKEPSVEIKSEPEATTEMETDDASQVEAEAEPEDDID
PLDAYMQEVNNEMRRVNNFVNPPTKNQGVVILTGVAKKKSTTTKKGELIEQNMDSLEYSS
EDELEDIRDTAVNLAMKHRKELAKIDHSSVSYAPFRKCFYVEVPELARMTAGDVEKYRAE
LEGVQVKGKGCPKPIKTWAQCGVSKKEMDVLRKLGFEKPTPIQCQAIPAIMSGRDLIGIA
KTGSGKTLAFILPMFRHILDQPSLEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRP
VCVYGGTGISEQIAELKRGAEILVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD
MGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKDVEQN
VVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADSLLRDLMKASYPCMSLHGGIDQF
DRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKK
GSAYTFITPEQSRYAGDVIRALDLSGSLIPAELQTLWTEYKAAQEAEGKTVHTGGGFSGK
GFKFDEQEFNAVKESKKLQKAALGLADSDDEEDIEQDIDQQIEQIFAAKRTVKDTSATAT
AAAAAAAAVAAAAASGGNVALASAAAAAAAANMAIAAASAAAAPGTPAAGAATGSAVGAT
LSSDKLELAKRLASKINSSKNLDIKSTVPVVEPLLKGQHVPGTAPAMLTARTVAEQMAAK
LNNKLNYQPKEDEESLGTIAGGNTNSFTKYEEELEINDFPQQARWKVTSKEALAQISEYS
EAGLTVRGTYVPQGKNPPDGERKLYLAIESCSELAVQKAKREITRLIKEELLKLSSAHHV
FNKGRYKVV
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagttctgggcgcgagcgggacagggatcgagaacgggagagggacagggat
cgggacagagacagggatcgagataatcgcagcagggactatgacatggtgaaatcccgt
aatggaggaggaggaggcggcggcaacagctttggaagttcccgtagcggccgggaggat
cgtaagcgtgtgaaggattcgaacagcgaacgcggcaggcgggatgagaagcggaggaag
cgttccaggtccaaggattatgacaaggaaaaacgctttgatcgggaccgagatcgggat
cgtgagcgccagcgggaaaaggagcgtgagcgtgagaaggaaaaggaacgagaccgggaa
aaggatcgagatcgtgatcgacagcgggatcgcgaggcagatggcaggcgtcccgccgcc
cctgcaccgctgattataccggtgccctcatccagctcttcagacgaggaggtagaagag
atcgacaaggaggagcagcagcgccgcctcgagcaggagatgatcaagcgtcgcgagcgc
atcgaacgctggcgggctgaacgcaaacgggataccaaagcgccggcagtggcaccggct
gcagtgaaaaccgtcaagaagtggagcttggaggatgagtccgaggaggatgatagcaat
cacgctccgtcgctggacagcggcaagaaggatgctgagcccgactcaccgccgtccaag
ttccatagcatccgcaagcgcttcgacgacgacgctgtcgagccaaagttctccccgatg
aagcgacccacctttagcaaggcattcggcgccaagctagtaatgggcttgtcacccaaa
accgaggtggagatcaagaaggagacgcctgtcgctgagctcaaggaggtgaagaaggag
ccccagtccgagccagagcccgctgaatcagttcccgcagctcccgtccaaatggagacc
gttgaagttaaaaaggaaccttcggtggagatcaagtcggaacccgaagccacaaccgaa
atggaaacggatgatgcttcccaagtcgaagcggaagcagagcccgaggacgatatagac
ccgctggatgcctatatgcaggaggtcaacaatgagatgcgccgcgtcaacaattttgta
aatccgcctacaaagaaccagggcgtcgtcattctcacgggcgtggcgaagaagaagtcg
acgacgacgaagaagggcgagctgatcgaacagaatatggacagtctggagtactccagc
gaggacgagctggaggatatacgcgacacggccgtcaatctggccatgaagcatcgcaag
gagctggctaagattgatcattcctcggttagctatgctcccttccggaaatgcttttac
gtagaggtgccagagcttgcgcgcatgaccgctggcgatgtggagaagtatcgtgcagag
ctggagggggtacaagtaaagggcaaaggctgccccaagcccatcaagacctgggcccag
tgcggcgtcagtaagaaagagatggatgtgctgcgcaagctgggcttcgagaagcccacg
cccatccagtgccaggccataccggccatcatgtccggacgggatctgataggtattgct
aaaaccggcagtggcaagacgttggcattcattttaccaatgtttaggcacatcctggac
cagccgagccttgaggatggcgatggcgccattgccatcataatggcacccacgcgcgaa
ctctgcatgcagatcggcaaggacatacgcaagtttagcaagtcgctgggccttcgaccg
gtgtgtgtctacggcggcacggggatctccgagcagatagccgaattgaagcgcggcgcc
gagattctcgtgtgtacgccggggcgcatgatcgatatgctggcggcgaactcgggacgc
gttacgaacctgcgacgagtcacctatgtggtcctggacgaggcggatcgcatgttcgac
atgggcttcgagccgcaggtgatgcgcatcatcgacaacgtgcggccggatcggcaaacg
gtcatgttcagtgccacattcccgcgccaaatggaggccttggctcgccgcattctcaaa
aaacccatcgaggtgattgtcggcggtaggtcggtggtttgcaaggatgtcgagcagaat
gttgtcatcctcaacgatgatgccaagttctttaagctcctggagctgctgggaatctac
caagaggctggaagcattatcgtctttgttgacaaacaggagaacgccgacagcctgctg
cgcgacctcatgaaggcctcgtatccgtgcatgagcctgcacggcggcatcgatcagttc
gatcgtgactccaccatcatagacttcaagtcgggcaaggtgcggctgctgatagccact
tccgtggcggcacgtggcctagacgtcaaggatctcatcctggtggtcaactacgatgtg
cccaatcactacgaggactatgtgcacaggtgtggccgcactggacgagcgggcaagaag
ggcagtgcgtacactttcattacgccggagcaatcgcgctatgctggtgatgtgattcgt
gccctggacttgtccggcagtctgattcccgccgagctgcaaacgctgtggacggagtac
aaggccgcccaggaggccgagggcaaaacagtgcacaccggcggcggtttcagcggcaaa
ggcttcaaattcgacgaacaggagttcaatgcggtcaaggagagcaagaagctgcagaag
gccgccctgggtctggccgactccgatgatgaggaggacatcgagcaggatattgaccag
cagattgaacagatctttgcggccaagcgcacggtgaaggacacgtcggccacggccaca
gctgcggcggcggctgccgctgcggtggctgctgccgccgcttccggtggcaatgtggct
ctggcctcggccgccgccgctgctgctgctgccaatatggccattgcagcggcatcagcg
gccgctgcaccgggcacacctgctgctggtgcagcgactggatcagctgtcggagccact
ctcagctcggataaacttgagttggccaagcgactggcctccaagatcaacagcagcaag
aatctggatataaagagcactgtgccggtcgtggagccactgctcaagggacagcatgtc
ccaggcacagccccggcgatgctgaccgcccgaacggtggccgaacagatggccgccaag
ctgaacaataagctcaactaccagcccaaggaggatgaggagtccctgggcaccattgct
ggcggcaataccaattcgtttaccaaatacgaagaagagctggagatcaacgacttcccg
caacaggcccgctggaaggtgacctccaaggaggcgctcgcccagatctccgagtactcg
gaggcgggtctcacggtgcgcggtacctatgtgccgcagggcaagaatccgccggatggc
gagaggaagctctacctggccatcgagagctgcagcgagctggccgtgcagaaggctaag
cgcgagataacgcgcctcatcaaggaggagctgctgaagctcagctctgcccaccatgtc
tttaacaagggacgctacaaggtggtctag
DBGET
integrated database retrieval system
