Drosophila serrata: 110188932
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Entry
110188932 CDS
T06108
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex exonuclease RRP42
KO
K12589
exosome complex component RRP42
Organism
dsr
Drosophila serrata
Pathway
dsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110188932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsr03019
]
110188932
Messenger RNA biogenesis [BR:
dsr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110188932
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
110188932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110188932
NCBI-ProteinID:
XP_020814529
LinkDB
All DBs
Position
Unknown
AA seq
295 aa
AA seq
DB search
MAYVALSEAEKTFILHGVEEDFRCDGRSRRDYRPMELEXGLVSNASGSARLRLANTDILV
GVKTEIDVPDPLTPDFGKLEFFVDCSANATPEFEGRGGSDLAQELVLSLQNAYESPLAFD
YRTLCLIPGQQCWKLYIDILILECGGNLHDAVSLAAKAALFNTKLPRVTATLLDAGITDL
IISDNPYDCTRIGIDTVPLLVTVCKIGDFCLVDPSAEEEFAAPRMVVSVSMRNGXAFLSG
THLTGGGAMHRDTMRNCLQLGLSIGEHLDTLLXNMLKQEQDRVGPKRPKTVGFLK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcatatgtggctttaagcgaggcggagaagacttttatccttcatggcgtggaggag
gactttcgatgcgacgggcgttctcggagggattaccgacctatggagctggagnngggg
ctggtgagcaatgctagtggctctgcccgcctccgcctggccaacacagacatcttggtg
ggtgtaaaaacggaaatcgatgtacccgatccactgacgccagatttcggcaagctagag
ttctttgttgattgctcggccaatgcaacgccggaattcgagggacgtggaggctcggat
ttggcccaggagctggtgctgtcccttcaaaacgcctacgaatcaccactggcttttgat
tatcgcacattgtgccttatccctggtcagcagtgctggaagctctatatagacatattg
attttggaatgcggtggcaatcttcacgatgccgtatccctggccgccaaggccgcactt
ttcaacacaaagctgccccgggtgaccgccacactactggacgccggcatcacagacctc
attatatcggataatccgtacgactgcacccgcattggaattgacactgtgcctctgttg
gtcaccgtctgcaagattggcgacttctgcctcgtggacccatcagcggaagaggagttt
gcagcacctcgcatggtggtatccgtatccatgcgcaatgggnnagccttcctatcgggc
acccatctgacaggcggcggtgctatgcaccgggacaccatgcgcaactgccttcaactg
ggcctgtccattggcgagcacctggacactctgctcnagaacatgctaaagcaggagcag
gaccgcgtgggacccaagcggcccaagacagttggtttccttaaataa
DBGET
integrated database retrieval system
