Dendrobates tinctorius (dyeing poison frog): 141077436
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Entry
141077436 CDS
T11000
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141077436 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtc03019
]
141077436 (CNOT1)
Messenger RNA biogenesis [BR:
dtc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141077436 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141077436 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
141077436
NCBI-ProteinID:
XP_073420480
LinkDB
All DBs
Position
Unknown
AA seq
2426 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQLEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECTSLISKPNFISTLAYAIDNPLHYQKSLKPSPHLFTQLSKVLK
LSKVQEVVFGLALLNSSSSDLRGFAVQFVKQKLPDLLRSYVDVDVGGSQEGGFQDIAIEV
LHLLLSNLLFGQKGAFGVGQEQIVAFLRTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
SDSGGITKTMMDSSLADFMQEVGYSFCASVEECRNIIVQFGVREVTAAQVARVLGMMART
HSGLTDGISLQSITSPGSGIWSDGKDKSDSVQVHTWNVEVFIDVVKELNPSLNFKDVIYE
LDNPVFLICDSKSLQTVVYGIQRGLGLDVFPADLIYRAWKHAEGQLSFIQYSLMNPDIFC
FADYPCHAVATDILKAPPEDDNREIATWKSLELIESLLRLAEVGLYEQVKQLFSYPIKHC
PDMLVLALLQINPSWNTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQARLSRILDVAQDLKALSMLLNATPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFVQACMTFLKRRCPSILGGIAPEKDQPKSSQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVVNKARQPPPGVMPKGRPPSTSSLDAISPVQIDPLAAMASL
SIGGPAAPHTQSLPAFPPNLGSAFSTPQSPAKAFPPLTTPNPSTAFSGLGGLSSQLPGGL
GTASLSGMGTGGLGLPAVSNDPFGQRKLSTSGISQPTFQQTDLSQVWPEANQHFTKEIDD
EANSYFQRIYNQPPHPTMSVDEVGLRALSGRRLALGDAPYSSCHVRFFQVLEMLQRFKDS
NIKREREVFNCMLRNLFEEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVL
EALRKPYGSKMYFFGIAALDRFKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSR
DPPVKMQGSITTPGSIALSQAQAQAQAQVPAKAPLPGPVSTNAVTSSTATTSAKTITITR
PTGVSFKKDVPPSINTTNIDTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVE
ELKETVKDEFMPWVSQYLVMKRVSIELNFHSLYSNFLDSLKNLEFNKMVLVETYRNIKVL
LTSDKAAANFSDRSLLKNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVV
PFVAKVLESSIRSVVFRPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLAIDIND
LKPGSLLKDKDRLKSLDEQLSAPKKDVKLPEELPPITNANEYAIRTAGKLWASVEKQESD
AVFTATATAPPPSATCTATAPPQPQYSYHDIHVYSLAGLAPHITLNPTIPLFQAHPQLKQ
CVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVAAHHMMRNLTAG
MAMITCREPLLMSIATNLKNSFATAMRAASPQQREMMEQAAAQLAQDNCELACCFIQKTA
VEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAV
YEEFARNVPGFLPTNDLTQPTGFLAQPMKQQAWATDDVAQIYDKCITELEQHLHAVPPAL
AMNPQAQALRSLLEAVALARNSRDAIAALGLLQKAVEGLLDATSGADADLLLRYRECHLL
VLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQYDVHLAQSM
ENGLNYMAVAFAMQLVKILLVDERSVSHVTEAEFFHTIETLMRINAHSRGNAPEGLPQLM
DVLRSNFEAMIERAQGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYHSAAAGR
DSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAANPTMIRA
KCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHEVRQSEFQQLPY
HRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAAGFVYAWLELISHRIFIAR
MLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVLLHDFPEFL
CDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTG
VMPPQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEPGNRYSIQLINALVLYVGTQAIAHI
HNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLY
LFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHDFVHCAPEIE
KLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7281 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaaccta
acaaagaagaattaccgtgccagccagctggaaatacaacacatcgtgaatcggcacggc
ccggaggcagacaggcacctgttacgctgtctattctctcatgtggatttcagtggcgat
ggtaaaagcagcggaaaagatttccatcagacacagtttttgattcaggagtgcacgtcc
ctgatctccaaacccaatttcatctccacgctcgcgtacgccatcgacaatcccttgcac
tatcagaagagcctgaagccgtctcctcatctcttcacccagctgagtaaagttctgaag
cttagcaaagtccaagaagtcgtctttggcttggctctcctgaactcctccagctcggac
ctgcggggttttgctgtgcagtttgtgaagcagaagctccccgatctcctgcgctcttac
gtggacgtagacgtagggggaagccaagaaggtggattccaagacatcgccatagaggtc
ctgcacctcctcctctccaatctccttttcggccagaagggagccttcggggtcggacag
gagcagattgtagctttcctcaggaccctccgcagagatttcccccaggagcgctgtccg
gtggtgcttgcaccactcctttaccctgaaaaacgggacatcctgatggaccggattctt
tctgactctgggggaatcacgaagaccatgatggacagttccctggcagacttcatgcag
gaagtgggctacagcttctgtgccagtgtggaggaatgccgcaatatcatcgttcagttt
ggtgtccgggaggtgactgctgcgcaggtggcccgggtgctgggaatgatggctcggaca
cactcggggttgacggacgggatctctctccagtccatcacctctcctggcagtgggatc
tggagtgatgggaaagacaaaagcgacagtgtgcaggtccacacctggaacgtggaggtc
ttcatcgatgtggtgaaggagctgaatccaagtttgaacttcaaggacgttatctatgag
ctggataatcccgtgttcctgatttgcgacagcaaaagcctccagacggtggtgtacggt
atccagcggggcctaggcctagacgtgttccctgccgatctgatctacagggcctggaag
catgcggagggccagctctccttcatccagtactccctgatgaacccagatatcttctgc
tttgcggattacccatgccatgcggtggccacggacatcctgaaggccccccctgaggat
gacaatcgtgagattgcaacctggaaaagtctggagctgatcgagtcgctgcttcggctg
gcggaggtgggactgtacgagcaagtgaagcagctcttcagctatcccatcaagcactgt
ccggacatgctggtgctggcccttctccagatcaacccgtcctggaacaccctgcgccac
gagctcatctccaccctcatgcccatattcctgggcaaccaccccaactctgccatcatt
ctgcactatgcgtggcacggtcagggtcagtctccctccatccggcagctgatcatgcac
gccatggcggagtggtacatgcgcggggagcagtatgaccaggctcggctttctcgtata
cttgatgtggcccaagacttaaaggccttgtcgatgctgttgaacgcgactccatttgcc
tttgttattgaccttgctgcactcgcctcccgacgggaatacctcaaactggacaaatgg
ctgactgacaagatccgggagcacggggagcctttcgtccaggcctgcatgaccttcctc
aaacgacgttgtccttccattcttggtggcatagctccagagaaggaccagccgaaaagc
tcccagcttcctccagagacgctggccaccatgctggcgtgcctccaggcctgtgcaggg
agcgtgtcccaggagctgtccgagaccattctcactatggtcgccaactgcagtaatgtg
gtgaacaaggctcgtcagccgccccccggggtcatgcccaaaggtcgtccccccagtacc
agcagcctggacgccatttctccggtccagattgaccccctggctgcgatggcgtcgctc
agcattggtggtcctgctgctcctcacacacagagtttgcccgcttttccccccaacttg
ggctctgcctttagcaccccacagtcaccagcaaaggcatttccacccctgactacaccg
aatccatccacagcgttcagtggcctcgggggtctgtcctcccagctaccaggtgggctc
ggcacggccagcctctctgggatgggcactggaggtttggggcttcctgctgtgagcaac
gacccgttcggacagagaaagctgagcacttctgggatcagtcagccgacgttccagcag
acggatctctctcaggtgtggccagaggcgaaccagcactttacgaaagagatcgatgat
gaggccaatagctacttccagcggatttacaaccagccgccgcaccccaccatgtctgtg
gacgaggtaggtctgcgggcgctgtctggccggcggcttgcactcggagatgctccgtac
tcatcttgtcacgttcggtttttccaggtcctggaaatgctgcagaggttcaaggattct
aacatcaagcgggagcgggaagtcttcaattgcatgctccgaaacctttttgaggaatat
cgcttcttcccccagtacccagacaaggagctgcacatcaccgcctgcctgtttggtggc
atcatcgagaagggactcgtcacgtacatggcgctggggctggctctgcgttatgtcctg
gaagcgctccgcaaaccttacggatccaaaatgtatttcttcggcatcgctgccctagat
aggttcaaaaacagattaaaagactacccgcagtattgtcagcacttggcttcaatcagt
cactttatccagttccctcatcacctgcaggagtacatagagtacggccaacagtccagg
gatcctccggtgaagatgcagggttcgatcaccactcctggaagcattgcactttcccag
gcccaggcacaagctcaggcccaggtcccagccaaagctcctcttcctggtccggtgagc
acgaacgctgtcacctcctctaccgctaccacgtcagccaaaaccatcaccataaccaga
cccactggggtcagctttaagaaggatgtgccgccgtccatcaacaccaccaacatagat
acgctgctggtggccaccgaccagacggagaggattgtggagccgccagagaacgtacaa
gagaagatcgccttcatcttcaataacctgtcccagtccaacatgacgcagaaggtggaa
gagctgaaggagacggtgaaggatgagttcatgccgtgggtttctcagtatttggtgatg
aagagggtcagcatcgagctgaacttccacagcttgtactccaacttcttggactcactg
aaaaatctggagttcaataagatggtacttgtggaaacttacaggaacatcaaggtgctg
ctgacatctgacaaagctgctgctaacttctctgaccgctcgctgctgaagaacctgggc
cactggctgggaatgatcacactggcgaagaacaagcccatcctgcacaccgacctggat
gtgaagtccttgttgctggaggcctatgtgaaggggcagcaggagcttctctacgtggtg
ccttttgttgctaaagtgttggagtctagcatcaggagtgtggttttccggccgccgaat
ccatggactatggcgatcatgaatgtcctggcggagcttcatcaggagcatgacctgaag
ctgaacctcaagttcgagattgaagttctgtgtaagaacctggccatagacatcaacgac
ctgaagcccggcagcctcctgaaggacaaggatcgcctgaaatcgttagacgagcaactc
tctgcccccaagaaagacgtgaaactgccagaggagctgccacccatcaccaacgccaac
gagtacgctatccgcacagcgggcaagctctgggcctcggtggagaagcaggagtctgac
gccgtcttcactgcaacggccacagcgcccccgcccagtgccacctgcacggccacggct
ccccctcagccacagtacagctaccacgacatccatgtctactctctggccggccttgct
cctcacattactcttaatcccacgatcccactcttccaggcgcatcctcagctcaagcag
tgtgtgcgccaggcgatagagcgcgcggtgcaggagctggtgcaccctgtggttgacagg
tccatcaagattgcaatgaccacgtgcgagcagattgtgcggaaggattttgctctggat
tctgaggagtcgcggatgagggtggccgctcatcacatgatgcgtaacctgactgccggc
atggccatgatcacctgccgggagccgctcctgatgagcatcgccaccaacctcaagaat
agctttgccaccgccatgcgggcggcctccccccagcagcgggaaatgatggagcaggcg
gctgcgcagcttgctcaggacaactgtgaactggcctgctgtttcatccagaagaccgcg
gtggagaaggccgggccggagatggacaagagactcgccacagagtttgagctgaggaag
cacgcccggcaagagggccgccgttattgtgatcccgttgtgctgacgtaccaggcagag
cgcatgccggaacagatccgattgaaggtcggaggtgtggaccccaagcagctggctgtg
tatgaggagtttgcacgcaacgttcctggcttcctgcccactaacgatctcacccagccc
acaggcttcttggctcagcccatgaagcaacaagcttgggccaccgatgacgtcgctcag
atttatgacaagtgcataactgaactggagcagcatctgcacgccgtgccccccgctctg
gctatgaacccccaggcccaggctctgcgcagcttactggaggccgtggcacttgcccga
aattctagagatgccatagctgcgttaggtttgctgcagaaggccgtggaggggctcctg
gatgccaccagtggagccgatgccgacctcctcctccgataccgggagtgccacctcctt
gtcctgaaagctctgcaggatggccgggcctatggctccccctggtgtaataagcagatc
actaggtgtctgatcgagtgccgggatgagtacaagtacaacgtggaggccgtggagctg
ctgatccgcaatcacctggtgaacatgcagcagtacgacgtccacctggcgcagtccatg
gagaacgggctgaactacatggccgtggcctttgccatgcagctggtgaagatcctgctg
gtggacgagcgcagcgtgagccatgtgactgaagcagagtttttccacaccatagagact
ctgatgcgcatcaatgcccactccagaggcaacgctccggaggggcttccgcagctcatg
gacgttttgcgctccaactttgaggcgatgattgagcgggcgcagggaggacccaacttc
atgatgcactctggaatctctcaagcttcggagtatgatgatcctcccgggctgagggag
aaggccgagtacctgctgagagagtgggtgaatctctaccactcggcagctgccgggcgg
gacagcaccaaggccttctctgcgtttgtgggtcagatgcatcagcaagggatcctgaag
actgatgacctgatcacgcgcttcttccggctgtgcaccgagatgtgtgtggagatcagt
tacagggcgcaggccgagcagcaacacaaccctgccgccaatcccaccatgatccgcgct
aagtgctaccacaacctggacgccttcgtgaggctgatcgcgctgctggtcaagcattct
ggagaggccaccaacaccgtgaccaagatcaatcttctgaataaggtcctgggcattgtg
gtgggggtccttctccaggaccacgaggtgaggcagagcgagttccagcagttgccgtat
catcggatcttcattatgctgttgctggagctgaatgccccggagcacgtgctggagaca
atcaacttccagaccctgactgctttttgcaataccttccacatcctccggccaaccaag
gctgcgggcttcgtctacgcctggctggagcttatttcccatcgaatcttcattgcacgg
atgctggcacacaccccgcagcagaaggggtggcccatgtatgcccagctgctgatagac
ctcttcaagtatctggctccattcctccgaaatgtagaactcaccaaacctatgcaaatc
ctctacaagggtactctgcgggtgctgctggtgctgctgcatgacttccccgagttcctc
tgtgactatcactatggcttctgtgacgtcatcccccccaactgcatccagctgaggaat
ctcatcctgagtgccttcccgcgaaacatgaggcttccagaccccttcactcccaacctg
aaggtggacatgctgagtgagatcaacatcgccccccgaatcctcaccaacttcactgga
gtgatgcctccacaattcaagaaggacctggactcttacctgaagacccggtcacccgtc
accttcctgtccgagctccgcagcaatctgcaggtctcaaacgagcctgggaaccgatac
agcatccagctgatcaacgcgctggtcctttatgtggggactcaggccatcgcccacata
cacaacaagggcagcacgccctccatgagcaccatcacacactccgcccacatggacatc
ttccagaatctggctgtggacttggacactgaaggtcgctacctcttcctgaacgctatt
gccaaccagctgcgctatcccaacagccacacgcactacttcagctgcaccatgctctac
ctgtttgctgaggccaatacagaggccatacaggaacagatcacccgggtcctgctagag
cgactgatcgtgaacagacctcacccctgggggctcctcatcaccttcatcgagctcatt
aagaatcctgccttcaagttctggaaccacgactttgtgcactgtgctccagagatagag
aagttgttccagtcggtggcgcagtgctgcatggggcagaagcaggcgcagcaggtgatg
gagggcaccggtgccagctag
DBGET
integrated database retrieval system
