Dendrobates tinctorius (dyeing poison frog): 141078355
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Entry
141078355 CDS
T11000
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dtc04812
]
141078355 (KATNB1)
Cytoskeleton proteins [BR:
dtc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
141078355 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WDR55
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
RMC1_N
Beta-prop_LRRK2
eIF2A
Beta-prop_NWD2_C
Beta-prop_pof12
WD_LRWD1
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
Tricorn_2nd
Tricorn_N
Motif
Other DBs
NCBI-GeneID:
141078355
NCBI-ProteinID:
XP_073421198
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MATSGVTKTSWKLQEIVAHASTVTTLALGKSSGRLLATGGDDCRINLWSVNKPNCIMSLT
GHTSPVESVRLNISENLVVAGSQSGSLRVWNMEEAKIQRTLMGHKAGVCSLEFHPYGDFV
ASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLVSSSDDHTVKLWDLVAGK
LMAELTEHSGPVYVVEFHPNDYLLASSSADRTVRFWDLEKFQSVGCLEGDATPSRSILFS
ADGGCLFCGGRDSLRVLGWEPERCFDTIPVLWGKVSDLSICNNQLIGVSHFQSNVSSFVV
DLNRVKMTGSGSLGSLPKETPVSQPTPAGSSLRRNYERPSTTCTKPKRVSPTSDEEEKES
RAEIQNAEDYKEIFQAKNAISRTPPRNSEPFPAPPEDDSAVMKEAVPAAPEAITPMPTTK
SNCEHFHRPPVVTSTPTVCPDPPAVSSNPPVISAARNEPIGLKVADFLPVLKGSSPAEMV
DEEAICQIRKGHDTMCMVLTSRMRNLDTVRAVWSTGDVKTSMDSAVAVNDLSVVVDVLNI
INQKASLWKLDLCLTVLPQIGKLLQSKYESYVQTGCVSLKLLLQRFLPLILETLSAPPSV
GVDITREERLMKCKLCYKQLKGLSVMVAGRASQSGRNGSAFRELQLLMSELDG
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggctacttcaggagtgacaaagacatcctggaagctgcaagaaattgtggctcatgcc
agtaccgtgaccacgctcgccctggggaagagctcgggccgcctcctggccactggcgga
gatgactgccgcatcaacttgtggtctgttaacaaaccaaactgtataatgagcctgacg
ggtcacacgtccccggtggagagcgtccgattgaacatctccgagaacctggttgtggcc
ggatctcagtctggttctctgcgggtgtggaatatggaagaagctaaaatacagaggacg
ctgatggggcacaaggccggagtctgcagcctggaattccacccgtacggagactttgtg
gcctcagggtctctggatacaaatattaagctgtgggacgtgcgcaggaagggatgcgtg
tttcgatacaaggggcacactcaggccgtgcgctgtttacgcttcagtccagatggcaag
tggctagtatcgtcttcagatgaccacacagtaaagctttgggatctcgttgctgggaaa
ttaatggcggagctgactgagcactcggggccggtgtacgttgtggagtttcaccctaat
gattatttgttggcttcatcgagtgcggacaggacagttcgcttctgggatctggagaag
ttccagtcggtgggctgcctggagggagacgccacgccgtccaggtccattctgttcagt
gctgacggcggctgcctgttctgcggtggccgggattcgctgcgtgttcttggctgggaa
ccagaacgctgctttgataccatccctgtgttatggggcaaagtctcggacctgtccatc
tgcaacaaccagcttattggcgtctctcacttccagtccaatgtgtcatcttttgtggtt
gacctaaatcgtgtaaaaatgactggatcaggatccctggggtctcttcccaaagaaacg
ccagttagtcagcccactccagcaggatcgtccttaagacgtaactacgagcgtccatct
accacctgcacaaagccgaaaagggtaagcccaaccagtgatgaggaggagaaggagtcc
cgagccgagatccagaatgcagaggattataaggagatcttccaggccaagaatgccatc
tctcggacacccccacggaacagtgaacctttcccagcccctccagaggacgactccgct
gtgatgaaggaagctgtgcctgcagcgccggaggccattactcctatgcccaccaccaag
agtaattgtgaacatttccacagacctccagtggtgacttccacacccactgtgtgcccc
gaccccccggccgtgtccagtaaccccccggttatatccgctgcacgcaatgagcctatt
ggtcttaaagtggcagactttcttccagtcttgaagggctcttctccagcagaaatggtg
gatgaggaagccatatgtcagatccgcaagggccatgacaccatgtgcatggtgctgacc
agccggatgcgcaacctggacactgtgagagcggtgtggagcacgggcgatgtaaagact
tctatggactctgctgtggctgttaatgatctctctgtggttgtggatgttctaaacatt
atcaaccagaaagcgtctctgtggaagctggatctctgcctgaccgtgttgccacaaatt
ggcaaactgctgcagagcaagtacgagagctatgtacagaccggctgcgtctccctcaag
cttctcctgcagaggttcttgccgctgatcttggagacgctgtctgctccaccctccgtg
ggtgtggatattacacgggaggaaaggctgatgaagtgtaagctctgctacaagcagctg
aagggcctgtccgtgatggtggccggccgggcctcgcagagcggtcgaaacgggagcgcc
ttccgggagctgcagctactcatgtctgaactggacggatga
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