Dendrobates tinctorius (dyeing poison frog): 141084318
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Entry
141084318 CDS
T11000
Symbol
SPG11
Name
(RefSeq) spatacsin isoform X1
KO
K19026
spatacsin
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtc03400
]
141084318 (SPG11)
DNA repair and recombination proteins [BR:
dtc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
141084318 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
UPF0728
Motif
Other DBs
NCBI-GeneID:
141084318
NCBI-ProteinID:
XP_073425082
LinkDB
All DBs
Position
Unknown
AA seq
2321 aa
AA seq
DB search
MELSVLLDPCITLQDWNELPIKVSLTRLKNLTLCSLQPGGSLCLTTFTAERKHGARTQLE
GPFTQFLWEDDNHNDTEQDQNPRLLTAGQNNDICVYEVCAGDGQAALTALCLCDVDTLRQ
LCAESHVCVPSPSSVRLLSLSGDDIFILLSSSVFVHLHYSGKDHMPSLVTCFCLDLDPET
TEHICDACYRHEILFLLESSGFIYVFDTCDGSLVAEMELPSRTSSDTAEPLKSICVSPNL
DSVVVSSSSSYFLSLRLSESLRENMIQAIQTWRNGRMSLSEAQGSTSQMDSSWDDTLVSL
LYRTKCRPDFPVCHHAADAQPRDLSSGAPFSWTVVGGGWVKALKDDKEDPLSLHIWSVSS
YSALFYVLQEEECATLVHWDMDTQGITYHALGKAVCVYSPDDEASLVITDRGLSLVLFSV
TQNEFLTRLMIHGSASTADTLCHLNNWGRCSVPIHTLEAGLENRQLDTVDFFLKSKDSIL
SSLPCDDGGVRSELFLCNVQDLVPALDLLYSYIHCTDQETQSKHFSEHLLQLMLQFLNAQ
LLTVCNLQSELDPGLEKCMGILTGYIAKLRPFMKRFQQQLPPVRVPRAERRHGLWENMSV
ENLISDAILTNCIPEAQTFLRAQGRYPSSLTWFKRESLKLVFRCLQETRLSEACQLLQNM
GYSRWDELHRICLHTSDVGVRTLLVDLLQKEGLFSEQQQQAIRTVCRLEELYGSGCQITD
ERKRVANPRPSWGISATSPEVKTLQGALTALREEPEVMLLHWAKDWDYGTQESLLLPWRK
NTNMSDISPKILWRHLTLWHDWKQIVSWINSTEQPQQKGDEEHPPWPRLSPAVIDEDTLC
CSYTRQEILDQLSRMNIFIPSELDDFESHVERLAISGRLMDPADASPGCPDFHNRFIILC
VERGLQYMLYSYLDCHRLNPELCSALADTTLHDTYPWFGYLVHNRQLSDHTDADRMFQVS
LSNAHMLMPGCQPSVNNMLLDGHTLLALATIMYAPGGIDGMMKHSEEPNLCQWNVDLPLL
KMALTPYPKLRAALFSQHPSNCGSPPDITLYHLLQALSPFHPAHFFTFQPTNSLAASDTS
SVMPHFSCPTLVKKLSVVEHLDTFFYLRSGRPAVAFSTFLVHYLLKSKDPKQLIHQVAED
VYSLALSCFHSPVVISSCVCFLELLGLSSYKLRMDVNVANVILRHSSSLQAEAGNVSQIQ
ALAHRLSKLVENEIEAAKDLLLSLEEVVEANLQQEDSLLPPHSLWVTVVQFCLLHGIPVS
TIYLKYCAQRQDWLQLLVHAYSTEQVFYVLDDLNPVLRSHISLAIQDKVSSGCSLQEIVS
DANTDNLHHVILKCLSMEEPGLMLLKECTRWRVPLFSVLAACTQGADTVSCLCAWILSSV
DAAAYTEITHSSDAIDYKWSLEDLVQIWDILLAKTDSGTLQKAFSIFMEDCPLLILLDVY
ELCLRDKNYTEAKNKIVDFQSSLSSLQSEDSSPAPIPFLWLHARASHLLQLLLLQSRTPY
ELQNILQLLCDSGSQIICEGMDIPKLNALCQILEDHPFMISEELLRDYSPAALQVECQRL
LQGLLEGRHFTLACQVAELAELPTDNLVIEEVLQDQSHLRAIGQWNCPQSRAQYWRKCHV
TFCTNQLSCLTASNFFQSQAAEPTATSALIAEQMEALAEQELLFTLAGHWLSLDESSSLR
PLKELEQQIWKCRIKREVLNRTGGSRTLSPLSAFTSFASEFSFSDLPLLNSPELLDIASL
PPLHDVALGTNEIPSSLVLSSLINRLLDDSRAHEASRVCRYFQLSHHDLWLVLSCRALAS
GDITIHQLHPDIQKIITAGINAQESVWNRKRRLQSSSSVDSMSSQTPTNPVVTHLEVLKD
ACTHGKTFCRQMLCMYELSQDLGCSFLDVSSRDPSEVLRTLLSSYRPELSDRAQAVITLH
GLSPDSVAQIVAEESLKMWRTLNKKGGQSEVYNVSEKRSNFLQIAKLCPDPTLVGLYLLD
HLETVPLTELHCIIEILTLAHDCFSLTCHLEGIRRVLQACRHLTEMHLAPSQEYSLMVRL
LSGIGRYNEMVYVFDILHKNQHFEVLLRKQLDTKGGLQTALLEYIKRCHPGDSEKHNMTA
LCFSLHRDIGHNHEHAAKIQLRLIQSRPWEYWMSDLGELRSSIIKALTLLIDAAESYSKD
SCVRQSLRCARLTRLLTLQLHLLNSGHETKLINLERVNLVEPILALPRFYQAVIVTEAYD
VQPDWPEVLYSKVIVGGDFQYLEEFKQRQLLSGVVIEQLSNKCKLNSPGSTGLQNLKRVI
CYCEDINTRYKLAIENKFYDITDVLMRDSQTRCCLTDMLSR
NT seq
6966 nt
NT seq
+upstream
nt +downstream
nt
atggagctaagtgtccttctggacccctgtataaccttacaggactggaatgagctgcct
ataaaggtctccttgacaagactcaaaaacctcaccttatgtagccttcaaccgggagga
agtctttgcctcaccaccttcaccgccgagagaaagcatggcgctcgtacacagctggag
ggaccgttcactcaatttctgtgggaagatgacaaccacaatgataccgagcaggatcag
aacccacgtctcctgaccgctggacagaacaacgatatatgcgtctatgaagtgtgtgcc
ggggatgggcaggcagcactgactgcgctctgtctctgtgacgtggacacattgagacag
ctctgtgcagagagccatgtttgtgttccttccccatcctccgttcgtctcctgtctctt
agtggagatgacattttcattttgctcagcagtagtgtctttgtacatcttcactactct
ggcaaggaccatatgccaagccttgtgacatgtttttgtctggacctggacccagagacg
actgagcacatctgtgatgcgtgttaccgacatgaaatcctgttccttctggagagttcg
gggttcatttatgtttttgacacctgcgatgggtcactagtggctgaaatggagcttcca
tcgaggactagtagtgatacggcagaaccactgaaaagtatttgtgtgtctccaaatcta
gattcagttgtggtgtcctccagcagttcttactttctttctttgaggctcagtgaaagt
ctcagggagaacatgatacaggccatacagacatggcgtaatgggcggatgtcattgagt
gaagcacagggatctacttctcaaatggacagctcttgggatgacactttagtgtcactt
ctctacaggactaagtgccgccctgactttcctgtgtgccaccatgctgctgatgcacag
ccaagagacctgtcctctggagcacctttcagctggactgtagttggaggaggctgggtg
aaggccctgaaggatgacaaagaggatcctttgagccttcacatatggtctgtgtcgtca
tatagtgctttgttctatgttctacaagaagaggagtgtgccaccctggtgcattgggac
atggacacacagggtattacttaccacgctctgggaaaagctgtatgtgtttattctcct
gatgatgaagcttctctggtgatcacagatcgtggcctttcccttgtccttttttcggtg
acacagaatgagttcctgacccggttaatgatccatggtagtgccagtactgcagatact
ctctgccacctaaataattgggggcgttgttctgtacctatccacacactggaggccggc
ctggagaacagacagttggatacagtagactttttcctaaagagcaaagatagcatcctg
agctctttaccttgtgacgatggaggcgttcgttctgagctcttcctctgcaatgtacaa
gatcttgtgccggctctagatctgctctactcttacatccattgcacagatcaagagact
cagagcaaacacttctctgagcacttgctgcagcttatgctccaattcctcaatgctcag
ttgctgacagtctgcaatttgcaatctgagctggaccccggcctagaaaaatgcatggga
attctgactggttacattgccaagctccgaccttttatgaagaggtttcagcagcagctg
cctcctgtgagggtcccacgtgctgagagaagacatggattgtgggagaacatgtctgtg
gagaatttaatttcagatgccatcctgacaaattgcatccctgaggcccaaaccttctta
cgagcacagggccgttacccttccagcttgacctggttcaaaagagaaagcttgaaactg
gttttcagatgtcttcaggagactcgtttgtcagaggcctgccagcttctccagaacatg
ggctattccagatgggacgaacttcatcgtatatgtttgcacacatcggatgtaggagtc
cgaacgctcttggttgatctgctgcagaaagaaggacttttttcagaacagcaacaacaa
gcgatccgcacagtatgcagactagaggaactgtatggcagtgggtgccagattactgac
gagaggaaaagagtggctaaccctaggccttcatggggaatctctgctacgtctccagag
gtgaagacgctgcaaggtgcactgactgctctgagagaagagccggaggtaatgcttctg
cattgggctaaggactgggactatgggacacaggagtcacttttactgccatggagaaaa
aacacaaacatgtctgatatcagtccaaaaatcctttggcgccatttgactctgtggcat
gattggaagcaaattgtttcttggattaacagtacagaacagcctcaacaaaagggagat
gaagagcaccccccctggcctcgcctcagtcctgcagtcattgatgaggataccttatgt
tgcagttacacaagacaggaaatattggaccaattatcaaggatgaacatttttattccc
tctgagctggatgattttgagagtcatgtggaacgtttagccataagtggaagactgatg
gatccggcagacgcttctccaggatgtccagattttcataaccgctttatcatcttgtgt
gttgagcgtggtctccagtacatgctgtacagttatctagattgtcacagattaaaccca
gaattgtgttctgctttagccgacacaactttacatgatacttacccgtggtttgggtac
ttggtgcataatcgacaacttagtgaccacacagatgctgatcggatgttccaggtcagc
ctgtccaatgcccatatgctgatgcctggttgccagccaagtgtgaacaatatgctcttg
gatgggcatacgctgcttgctctggcgacaatcatgtatgcccctggcggaattgatggg
atgatgaagcatagcgaagagcccaacctctgccaatggaacgtggaccttccattattg
aagatggcgttgaccccctatcccaaactaagggcagctctcttctctcagcacccatct
aactgcggctcaccccctgatattacactctaccatcttcttcaggccttgtcacccttc
catcctgctcattttttcacatttcaacctacaaattctctggcagcaagtgacaccagt
tcggtgatgccacatttctcctgcccgacgttggtgaaaaagctgtctgtagtggaacat
ctggatacatttttctatttacgcagtggccggcccgctgttgccttttccacttttctt
gtgcattatcttttgaaaagcaaagatccaaagcagctgatccatcaggttgcggaggat
gtgtactcgctggccttgtcctgctttcattcccctgttgtcatttcctcctgtgtttgc
ttccttgagcttcttggacttagtagctacaaactccgcatggatgtaaatgtggccaat
gtgatcctgcggcacagctcatccctccaggcggaggcaggaaacgtttcacaaatacaa
gcattagcccacagattgtcaaaattagtggaaaatgaaatagaggctgcaaaagatctt
ttactgagcttggaagaggttgtggaggcaaatttgcagcaggaggacagtctccttcct
cctcatagtctatgggtcacagtggtgcagttctgtctcctccatggtattcctgtgagc
accatctatctgaagtactgtgcgcagagacaagactggctgcagctgctggtacatgca
tatagcacagaacaggtcttttatgtattggatgatttaaatcctgttctccgaagtcat
atctccctagcgatacaagataaagtctccagtggttgttccttgcaagaaattgtcagt
gatgcaaacacagacaatctccaccatgtgatactgaaatgcctaagtatggaggaacca
gggcttatgcttctgaaggagtgtacaagatggagagtgcctctattcagtgtgctggct
gcctgtacacagggtgcagacacagtctcctgcctctgcgcctggatcttgagttcagtg
gatgctgctgcatatacagagatcacgcactcgtctgacgctatcgattataagtggagc
ttggaagatcttgtgcagatttgggatattctcctggcaaagacagacagtggcaccctg
caaaaggcattcagcatttttatggaggactgccccttgctgatcttacttgatgtgtat
gagctttgtctgcgtgacaagaattacacggaggccaaaaacaaaatagtggatttccag
agtagtttgtccagtctccagtctgaagacagttctccagctccgatcccattcttgtgg
cttcacgctcgggcttctcatctcctgcagcttctgcttctccaaagccggactccatat
gagttacagaatattttgcagcttctttgtgatagcggcagccagattatatgtgaaggc
atggatattcccaaactaaatgccctctgtcaaatcctggaagatcatccttttatgatt
agcgaggagcttttgagggactacagccctgcagcgttacaggtggagtgtcagagactg
ctgcagggtctgctagaaggccgacactttactttggcttgtcaggtagctgaattggca
gaattgcccactgacaacctggtaatagaagaggtgctacaagaccaaagccaccttcga
gcgattggtcaatggaactgcccgcagagccgagcacagtattggcggaagtgccatgtc
actttttgcaccaaccagctgtcctgtctcacagcatccaatttcttccaatcgcaggct
gcagagcccactgccaccagtgccctaatagcagagcagatggaggcactggcagaacaa
gagctgctcttcacacttgcagggcactggctttcactggatgaatcttcttcactaagg
ccattaaaagaattggaacagcagatctggaagtgtcgcatcaagcgggaagtattaaat
aggactggtggctcacggacgttgtcccctctgtcggcttttactagtttcgcctctgag
ttttcattttctgatctgcctctactgaattctcccgagctcctagacatcgccagttta
cctccactacatgatgtagctctgggaacgaatgaaattccaagctccttggtactgagt
agtctgataaaccgactattggatgacagtagggcacatgaagccagccgagtttgcagg
tacttccagttgtcccatcatgatttatggcttgtgctgagctgccgggcgctggcctca
ggggatataacaatacatcaactgcatcctgatatccagaaaatcatcactgcaggcata
aacgcccaggaaagcgtgtggaatcggaaaaggagattgcaaagctcatccagtgtggat
tccatgtcttctcagacccccaccaaccctgtggtcacacatctggaagttctgaaagat
gcttgtacacatggaaagactttttgcagacagatgctgtgtatgtatgagctgagccag
gatcttggctgttcgttcttggacgtatcatcccgggatcccagtgaagttctgcgtacc
ttgctgtccagttatcgccctgaacttagtgaccgagcccaggcagttatcacattacat
gggctttcccctgactctgtagcccagattgtagctgaagagagcctgaagatgtggagg
acactgaacaagaaaggaggccagtctgaggtatataacgtctctgagaaacggtccaac
tttcttcagatcgcaaaactgtgtccggatccaactttggtggggttatacttactggat
cacctggagactgttccacttacggagcttcattgcataattgaaatcctcaccttggct
catgattgcttcagtcttacatgccacctagaagggatccgacgcgtcctgcaagcatgt
cgccacctgacggagatgcatttggctcccagtcaggaatatagcctcatggttcgactt
ctgtcagggattgggcgatataatgaaatggtttatgtctttgatatcttacacaaaaat
cagcactttgaggttctgctgaggaaacagcttgatacaaaaggtggattgcagactgca
ctcttggaatacattaagcgctgtcatccaggtgatagtgagaagcacaacatgaccgca
ctctgtttcagtctgcatcgggacattggccacaaccatgagcatgcagcaaaaatccag
cttcgattaatccagtccaggccctgggaatattggatgtctgacctgggagagcttcga
tcttctattatcaaggccctcactctgctgattgatgctgctgagagttattccaaggac
tcttgtgtgcgccagtcactacgctgtgcccgtctcacccggcttctgaccctacagctt
catctgttgaacagtggccatgaaacaaagcttatcaacttggagcgagtgaacttggtg
gagcccatattggctctgccaagattttatcaggctgtcattgttacagaagcatatgat
gtgcagccagactggccagaagtcctgtatagcaaagtaatagttggaggagattttcag
tacctggaagagttcaagcagcgtcagctcctcagcggtgtggtgatagagcagctgtca
aacaaatgcaaactgaactctcctgggtccactggtctgcagaacctgaagcgagtgatc
tgttactgtgaggacatcaacacccgctataaactggccattgagaacaagttctatgac
atcactgatgtcctgatgagggactcgcagacacggtgctgcctgacagatatgctgtct
cgataa
DBGET
integrated database retrieval system
