Dendrobates tinctorius (dyeing poison frog): 141091794
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Entry
141091794 CDS
T11000
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc04510
Focal adhesion
dtc04512
ECM-receptor interaction
dtc04518
Integrin signaling
dtc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141091794 (COL6A1)
04518 Integrin signaling
141091794 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141091794 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141091794 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dtc04147
]
141091794 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
dtc00536
]
141091794 (COL6A1)
Exosome [BR:
dtc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141091794 (COL6A1)
Glycosaminoglycan binding proteins [BR:
dtc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141091794 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
141091794 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
DUF1194
VWA_CoxE
VWA_3
vWA-TerF-like
Usp
Motif
Other DBs
NCBI-GeneID:
141091794
NCBI-ProteinID:
XP_073433618
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MKMLRGDLPLTLLQLYLLLGGGTAQQGQGQGPVKEPSLPGTGPGTEIFFPPPDRKSSYQD
CPVDIFFVLDTSESVALRVKPFKTLVTQVKKFTEKFIDKLTTRYYRCDRHLVWNAGALHY
SDEVILISPLLSLAKDRDTLKARVDKVEYIGKGTHTDCAIKRGIEEVLIGGSHQRENKYL
VVVTDGHPLEGYKEPCGGLEDAANEAKHLGIKVFSVAISPNHLEPRLSVIASDPNYRKNF
TATSAAGLSDLEIENTIDSIIDTIKINGEHGCCSYECQPPRGQQGPHGSPGYEGETGKTG
LPGDRGPPGDPGRPGDIGPVGYQGMKGDQGSKGDKGGRGAKGAKGEKGKRGNDGTDGQKG
VDGESGFPGCKGSPGFEGESGPPGPKGDPGSYGAKGDKGDPGQAGSPGKPGNAGNIGDKG
DPGGNGPPGEKGESGDEGNAGPDGAPGERGGPGERGPPGVSGIRGPRGDKGDPGQAGDQG
RDGPVGPNGDPGDAGPQGPKGYRGDEGPSGPEGPKGPRGAKGLPGEQGVAGERGEDGLPG
NGTDGFPGFQGYPGARGDRGTNGTKGYPGPKGDEGDPGEPGVDNLVPGTLGPKGGKGYRG
PEGPPGPPGPPGPPGPDECEILDIIMKMCSCCECTCGPIDVLFVVDSSESIGATNFQTAK
EFIIKVIDRLSRDEHVKFDAGESRVGVVQYSHGNTQESVAMGDPNINTIGQLKEAIKNLG
WIAGGTWTGEALAFTKDNLLKRFASDKRVALVLTDGHSDILRDKTPLDVLCKVAPVVSLG
VGDIFQSPANPDQLGEIACGGAPTTKGLSLQRTSYAELLEDGFLQNVTAHICKEKKCPDY
TCAIKFEAPADITLLVDSSTSVGSRNFEMSKGFVRRIAQRFLNAESPGFDSVRLSVVQYS
GQNEQQVEVQFLSNYTEVVSAIDKMKFINGGTDVGAALRAVTDLYREDAAAGASKKVLLF
SDGNTQAEDTLLKAVQDARAAGIEITVLSVGSRPQENNLRVILTGAPADSKVVFSERSLF
RIPDYSSLLRGVFYKTISRRVSLKRQ
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctgaggggagacctccctctgaccctactgcaactataccttttgctagga
ggtggcacagcacagcagggccaaggtcagggccccgttaaggaaccatccctacctggc
actggacctggtactgagatctttttccccccaccagacagaaaatcttcctatcaagat
tgccctgtggatattttctttgtgttggacacatcagagagtgttgctcttcgtgtgaaa
ccattcaagacacttgtgacccaagtgaaaaagtttactgaaaagtttatagataaactt
actacaaggtattatcgatgtgaccgccaccttgtgtggaatgccggagctctacactac
agcgatgaagtcatcctcattagccccctgctcagtctagccaaagatcgggatacttta
aaggctagagttgataaagttgagtacattggaaaaggtactcacactgactgcgccatc
aaaagaggcattgaagaggtcttgattggaggatcccaccagagggagaacaaatatcta
gttgtggtgactgacggtcatcctttggaaggatacaaggagccatgtggtggtttggaa
gatgctgcgaatgaagccaagcaccttggaattaaggtcttctctgttgctatttcacca
aaccacctggagccacgtctcagtgttatagcatctgatcccaactacaggaagaatttc
acagcaaccagtgctgcaggtctgtctgatctggagatagaaaacaccattgattccatc
attgacaccattaaaatcaatggtgaacacgggtgctgctcctacgagtgtcagcctccc
cgtggacaacaaggtccccatggttcccctggttatgagggagaaactggtaaaactgga
cttcccggagaccgtggacctccaggagaccctggccgtcctggtgacattggacctgta
ggataccagggaatgaagggagaccaaggctctaagggagataagggaggaagaggagca
aagggggcaaaaggtgaaaaaggcaaaagaggaaatgatggaactgatggacaaaaggga
gttgatggagagtctggattccctggttgcaaaggatcgcctggttttgagggagaatct
ggacctcctgggcccaaaggagatcctgggtcatatggagcaaaaggagataagggtgat
cctggacaggctggttctcccgggaaacctggcaatgctggtaacataggagacaaggga
gatcctggaggaaatggcccacctggggagaaaggtgaatcaggtgatgagggtaatgct
ggacctgatggagctccaggtgaacggggcggtcctggagaacgtggacctcctggggta
tctggtatacgaggacccagaggagataagggagatccgggccaagctggagaccaaggc
cgagatggacctgtgggtcctaatggtgatccaggtgacgcaggaccacaaggaccaaaa
ggatacagaggagatgaagggccaagcggtcctgaggggcctaaaggaccaagaggagct
aaaggattacctggagagcaaggagtggcaggcgagaggggtgaagatggcctccctggg
aatggtacagatggttttccaggttttcagggataccctggggctcgaggtgaccgtggc
acaaatggaacaaaaggatatcctggacctaaaggagatgagggtgatcctggggagcct
ggtgtagataatcttgtgccagggacacttgggcccaaaggaggaaaaggctaccgaggc
ccagaaggaccacctggaccccctggacctccaggcccaccaggcccagatgagtgtgaa
attctggacattatcatgaaaatgtgttcttgctgcgaatgcacctgtggtcctattgat
gtcctcttcgtggttgacagttctgagagtattggagccactaatttccagacagccaag
gagtttatcataaaagtcattgatcgactgagcagagatgaacatgtcaagtttgacgct
ggggaatctcgagttggagtggtgcaatacagtcatggaaatactcaagaatctgtagcc
atgggagaccccaacatcaacactattggacagctgaaggaggcaataaagaatttggga
tggatagccggaggcacctggacaggagaggcacttgcttttacaaaagataacctactg
aaacggtttgcatctgataagagagtggccctagtgttgacagacggtcactctgatatc
ctaagagacaaaacaccactcgatgtcctgtgtaaggttgctccggtggtttctcttgga
gtaggagatatcttccaatctcctgccaaccctgaccaactgggcgaaattgcttgcggt
ggagcaccaactacaaaggggttatctttacagaggacaagttatgccgagttgctagaa
gatggattcctacagaatgttactgctcatatctgcaaagaaaagaagtgcccagattac
acttgtgccatcaaatttgaggctcctgctgacatcactttacttgtggatagttctacc
agtgttggaagccgaaactttgagatgagcaaaggttttgtacgacgcattgcacaacgt
ttcctaaatgcggaaagtccgggatttgactctgtgcgcctttcagtagtgcagtacagt
ggtcagaatgaacaacaagtcgaagtacagttcttgtccaattacacagaggttgtaagt
gcaatagataagatgaaattcatcaacggaggcacagatgtaggagcagctcttcgtgca
gtgacagacctctatcgtgaagatgcagccgctggagcgagcaagaaggtgctgttgttc
tcagatggaaatacccaagcagaggacactcttctaaaggctgtgcaagacgcccgggct
gcaggaattgaaatcactgttttgtcagtaggaagtcgcccccaagaaaataatctacga
gtaattctaactggcgcccctgcagattctaaagttgtcttcagtgaaaggagcttgttc
cgaatccctgactactcctctctacttcgaggtgttttctacaagaccatcagccgcagg
gtatctctgaaacgccagtaa
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