Dendrobates tinctorius (dyeing poison frog): 141101568
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Entry
141101568 CDS
T11000
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3 isoform X4
KO
K12600
superkiller protein 3
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141101568 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtc03019
]
141101568 (SKIC3)
Messenger RNA biogenesis [BR:
dtc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
141101568 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_8
TPR_11
TPR_17
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_19
ANAPC3
TPR_9
ARM_TT21_C
TPR_15
TPR_7
TPR_MalT
BTAD
Tsi3
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
141101568
NCBI-ProteinID:
XP_073397039
LinkDB
All DBs
Position
Unknown
AA seq
1398 aa
AA seq
DB search
MEEIPSEEHKVLCQRYILCLSKLPHEESKLKEICDSTATTYPSFSFPLEVLSMHYIRSGD
VSEEAVTCYNKLVEMEPCNGPGLIGIGVKALHDKKYDMAAENLSRGVHAVRCCPRAWYIL
AQAQLKIHKHEKAAFSCEQAIKLLSQDNLSHEDTQQKDHALRLKAQALLQCTDADHSDEI
LKILEQISNIDDDPVLTSLKGQVYLKKGSIEEASKVCRKLQKTHHEFAETYFLQGQLHYT
QKNYIEADKSFHHAIEKIPEDANYYFCLGLTYWFMSEETKRDKTKAVTQFLKAAKLDPYM
PKVFCYLGHYYREVAGDKTRARGCYKKAFDLDDNDGESGAETVDLSMELNDMDTALAILS
SVTDRASAGTAKWAWLRRGLYYLRVGQHSKAVSDLHAALRADPTDPNCWECLGEAYLSRG
GYSTALKSFMKASELNPDSMYSAYKIASIKQLLGTYTEAVTEYQHIVQKSGEYVPALKGL
GECHLMLAKGALADFLDGKAVYLIEKGLEYLTRAVQQHPDLLCLWKLLGDSCSCLHLASP
AKVSVHVMGAIVGQNTDQKLLNKSEILGLGGRCYGRALKLQPSANIWCDLGINYFYQAQH
ALISDHVGSNQSDLLEKSMQCIKKAIMMDSSNHQYWNALGVISCSNDVNKALAQHAFIKS
IQCQQNNAIAWTNLGALYLLNENIELSHQAFKVAQSLDPSYVRCWIGQALIAETVGSYET
MDLFRHTTELNMNTEGAKGYAHWVCMTLLDKSNRNTELYRYNIVQMNAITTAHLALSKYT
ERIQSDSTAFEMLGYLNEHLKLKRQAKEAYERAMSILRDTEDKDHYNSALRHYGRSLCAV
GQYDEAIKAYSSTPLKDLDNLTGLALAYFKKGLLQESIKVYKTALSTAKTEQEKAHILTA
MAVIEYRQGDLDSSKTLLFKCSVLKEPSIESLHSLCALGLAKRDVTLATAALNELLKHVK
TNDNVYERCLIISAIYALQGRNAAVQRQACKAIHSHPGNPELWCLLSRIVPLCAPRNSRG
GAAAGIVAHSLNLSQAKTSLLYTAVNELAAGCLTTDNKKQNALKTAQRAAHLFPDNPAVW
AGLMAACQVENAAFYITKKSFKGTECGVMFEASVKSKSEGKQLPTGYAQALESWSTCQAI
SSLKDQDKLCEAEALCTKGLQTCPDQASLFLLLRQVQLKQLLQSQTSVPEPVLEELKKTV
MSNPNSLSAWHCQPPDGSSIHPTVPVSPNERLGEKDFTWLADVYQTQGMMVDAEMCYRKG
LQLASQQGNWSGKLSSLLRLSLLALKVCMAQVPDTRWPALLQEATSEVLKMTSCPLAILL
QGILQFSTKGSRKTRQLLEKVVYRAVCSESVASVARWYLLRHLHAKNDDQLIEVLLENAK
IHGDERVLDLYKQLSKCS
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggaggagatcccctcagaagaacacaaggtgctctgtcagcggtacattctttgtttg
tccaagcttccccatgaagagtcaaaattgaaggagatctgtgacagcacggccaccaca
tacccttcttttagttttcccctagaagtacttagcatgcattacatcaggtctggggat
gtcagtgaagaagcagtcacgtgttacaataagctagttgaaatggagccatgcaatggt
cctggtctcattggaataggagttaaagctttacatgataaaaagtacgacatggccgct
gaaaacctttcccgaggagtccatgcagtgcgctgctgtcccagagcatggtacattctt
gcacaagctcaactgaagatacacaaacatgaaaaggctgctttctcctgtgagcaagcc
attaaacttctgtcccaggataatttatctcatgaggacactcaacagaaggatcatgct
cttaggttgaaagcacaggctttgctgcaatgcacagatgcagatcactctgacgagata
ctgaaaatcttggagcagatttccaatatagatgatgatccggttcttacttccctgaaa
ggccaggtatatttaaagaagggatctatagaagaagcatcaaaggtctgtagaaaactt
caaaagacacatcatgaatttgcagaaacatattttttgcagggtcagctccattacact
caaaagaactacattgaggctgataaaagttttcatcatgccattgagaagattccagag
gatgcaaactactatttctgccttggtttaacttattggtttatgagtgaagaaaccaaa
cgagataaaactaaggccgtgacacagtttttaaaggctgccaaactggacccctacatg
ccaaaagtgttctgttatttgggtcattactatcgagaagtagctggtgataagaccagg
gctcgtggttgctataagaaagcgtttgacctggatgacaatgatggagaatcaggagca
gaaacggtagatctaagtatggagctgaatgacatggacacggcattagccattttgtca
agtgtaacagatagagcaagcgcaggaacagcaaagtgggcatggctgcggagaggcctg
tactacctaagagttggtcagcactccaaagctgtgtctgacttgcacgctgctttgaga
gccgaccccacggaccccaactgctgggagtgtttaggagaagcttatctgagtagaggg
ggctattctaccgctctgaaatcctttatgaaagccagcgaactgaatccagattcaatg
tacagtgcatacaaaatcgcatccatcaaacagctcctgggcacatatacagaggcggtg
actgagtaccagcatatcgtacagaagtccggagaatatgtgccagcgctgaaagggctc
ggtgaatgtcacctaatgcttgctaaaggggcacttgctgatttccttgatggcaaagct
gtatatctaatcgaaaagggtcttgagtatttgacaagagcagttcagcagcatcctgac
cttttatgtctgtggaaactgcttggagattcttgctcctgtttacatttggcctccccg
gccaaagtcagcgttcatgtcatgggtgccattgtaggacagaatacagatcagaagcta
ctgaataaatccgagatcttgggacttgggggaaggtgttatggtcgggcactgaagctt
cagccgtctgcaaacatatggtgtgatcttggcatcaattatttctaccaggcacagcac
gccctgatttctgatcacgtaggcagtaaccagagtgatttattggaaaagtcaatgcag
tgcattaagaaggcgattatgatggacagcagtaatcaccagtactggaacgcactcggt
gttatttcttgctccaatgatgtcaacaaggcacttgctcagcacgctttcatcaaatca
atccagtgtcagcaaaataatgccattgcttggactaatctcggtgctttatatttgctg
aatgaaaacattgagctgagccatcaagctttcaaagtagcccagtccttggatccgtct
tacgtgagatgctggatcggtcaggcactaattgcagaaactgttggaagctatgaaacg
atggatctcttcaggcatacaacagagcttaatatgaataccgaaggagcaaagggatat
gcacactgggtctgtatgaccctcctggataaaagcaataggaacacagagctgtaccgc
tataacattgtccagatgaatgccatcactacggctcatctagcattgagcaaatacaca
gaacgaatacaaagtgattcaaccgcatttgagatgctgggatatttaaatgaacatcta
aaactaaagagacaagcaaaggaggcttacgagagagccatgtccattcttcgagataca
gaagacaaagaccattataattctgcacttcgacattacggacggtcactttgtgctgta
ggtcagtatgatgaagccatcaaagcttacagttctacacctctgaaagatcttgataac
ctcactggattggctcttgcttactttaagaaaggacttctacaagaaagtatcaaagtg
tacaagacagcgttgtctactgccaagaccgagcaggaaaaagcgcacatcctcaccgcc
atggcagtaattgagtacagacagggggacttggattcctccaaaacactcctgtttaaa
tgctctgtattaaaggaacccagcattgaaagtctgcactccctatgtgctttgggccta
gctaagcgtgatgttactctagcaacggccgctcttaacgagcttctcaagcatgtaaaa
acgaatgataatgtctatgagaggtgccttattatatcagctatatatgctttacaaggg
aggaatgctgcagtgcagagacaggcctgcaaagctatacacagccatccagggaatcct
gagttgtggtgtcttttatcgaggatcgtgccattgtgtgctcccaggaattctaggggt
ggagctgctgccggcattgttgcacattcactgaatctgagccaagcaaagacatcacta
ttatacacggcagtgaatgaattagctgctggttgtctgacaactgacaacaagaagcag
aatgctctgaagacagcgcaaagggctgcacatctctttccagataatcccgcagtatgg
gctggattaatggctgcttgtcaagtggaaaatgctgctttctacattactaagaaatct
ttcaaaggcactgagtgtggcgtaatgtttgaagcatctgtgaaatctaaaagtgaaggt
aaacaactccctactggctatgcccaggccctggagagctggtcaacatgtcaagccatc
tcctcactgaaggatcaggataagctgtgtgaggccgaggcactctgcaccaagggattg
caaacctgtcctgaccaagcatccttatttctgctgttaagacaagttcagttgaagcag
ctgctgcagtcccagacttcagtacctgaacctgttctggaggagctgaagaagacagtg
atgtctaatccaaattcactctcagcctggcattgtcagcctccagatggcagtagcata
caccccacagtacctgtgtcccccaatgagcgtctcggagaaaaggattttacgtggtta
gctgatgtttaccagactcagggaatgatggtggatgcagagatgtgctacaggaaggga
ttacagctggcatcccaacaaggaaattggagtgggaaactctcgagtctactacgatta
tcccttcttgcacttaaagtctgtatggctcaggtccctgatactcgctggccagcactc
ctgcaggaggccacaagtgaagttttgaagatgacctcctgcccattggccattcttctt
caaggaatcctacagttcagcacaaaagggtcacggaaaaccagacagcttttggagaag
gtggtttaccgtgcagtatgcagtgagtctgttgcctctgttgcccgctggtatctctta
agacatttacatgccaaaaatgatgatcagttgatagaagtacttctagaaaatgccaaa
atccatggagatgagagagttcttgatctctacaagcaactatccaaatgttcctag
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