Deefgea tanakiae: K4H28_12245
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Entry
K4H28_12245 CDS
T08586
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
dtk
Deefgea tanakiae
Pathway
dtk02024
Quorum sensing
dtk03060
Protein export
dtk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
K4H28_12245 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K4H28_12245 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K4H28_12245 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dtk02044
]
K4H28_12245 (ffh)
Enzymes [BR:
dtk01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
K4H28_12245 (ffh)
Secretion system [BR:
dtk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
K4H28_12245 (ffh)
Eukaryotic Sec-SRP protein
K4H28_12245 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_30
AAA_31
GTP_EFTU
AAA_33
cobW
KTI12
APS_kinase
Mg_chelatase
Helicase_RecD
AAA_19
AAA_18
ResIII
ArsA_ATPase
AAA_24
Thymidylate_kin
6PF2K
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QZA77059
UniProt:
A0ABX8Z845
LinkDB
All DBs
Position
complement(2643168..2644511)
Genome browser
AA seq
447 aa
AA seq
DB search
MFENLSGRLGGVVKTLRGNARLTEDNMKDALREVRMALLEADVALPAVKQFIADVKVRAE
GQEVVGSLTPGQALIGVVYEELTKLMGAQNDALNLAAVPPAVILMAGLQGAGKTTTSGKL
AKLLKETQKKKVLLVSADVYRPAAIEQLKTLAGQLTVDWFPSDVTQKPVDIALAAIDHAK
RHFYDVLIVDTAGRLAVDEAMMAEIKALHAAVNPIETLFVVDAMQGQDAVNVAQAFNATL
PLTGIVLTKMDGDSRGGAALSVRHVTGKPIKFLGTGEKLTGLEPFHPDRMASRVLGMGDV
LSLIEDVKNSVDEAEALKMMKKVKSGKGFDLEDFKTQIQQMKKMGGMSALMDKLPGNMAA
MADSQVTDKSVARIEGIINSMTPLERRKPELLKASRKRRIAAGAGVSVQEVNRLLKQFEQ
TQKMMKQFSGGGMAKMMRGLKGMMPGM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatctgtctggccgtttaggtggtgtcgttaaaacgttgcgcggcaacgcc
cgcttgactgaagacaatatgaaggatgcgctgcgcgaagtgcgcatggcgctacttgag
gccgatgtggcattgccagcggtcaagcaatttattgctgatgtgaaagtacgtgctgaa
ggtcaagaggtggttggcagccttacgccgggccaagcattgatcggtgtggtgtacgaa
gaactcactaagctaatgggcgcacaaaatgatgcgctgaatttggccgcggtgccgccg
gctgtgattttaatggcgggtttgcaaggtgcgggtaaaaccaccacttcgggtaagttg
gccaagctattaaaagaaacgcaaaagaaaaaagtactactggtttctgctgatgtgtat
cgtcctgctgcgattgagcagcttaaaaccttagcgggtcaattgactgtcgattggttt
ccttctgatgtaacgcaaaaaccggttgatattgcgctggcggcgattgatcatgccaaa
cgccatttttatgatgtgctgattgtcgatactgcgggtcgtttggcggtagacgaagca
atgatggccgagattaaggccttgcacgccgctgttaacccgattgaaaccctattcgtt
gttgatgcgatgcaggggcaggatgcggtgaatgtggcgcaggcatttaatgccacgctg
ccgctgacgggtattgttctcaccaagatggatggtgattcgcgcggtggtgcggctttg
tcggtgcgccatgtaacgggtaagccgattaaattcttgggaaccggtgagaagctaaca
gggctggagccgttccatccggatcggatggcaagtcgcgtccttggcatgggcgatgtg
ctttctttaatcgaagatgtgaagaactcggtcgacgaagctgaagcgctgaaaatgatg
aaaaaggtcaaatccggcaagggatttgatctggaggactttaaaacccaaattcagcaa
atgaagaaaatgggtggtatgtcggctttgatggataaattgcctggcaatatggcggcg
atggccgatagccaagttactgacaaatccgttgcgcggattgaaggcattatcaattca
atgacgccgcttgaacgccgcaagccagagttactgaaagccagtcgcaaacgccgcatt
gcggcaggtgctggcgtatcggtgcaagaagtgaatcgtttgctcaagcaatttgagcaa
acccaaaaaatgatgaagcaattctcgggtggcggcatggcaaaaatgatgcgtggccta
aaagggatgatgccagggatgtaa
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