Desulfobacula toluolica: TOL2_C34870
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Entry
TOL2_C34870 CDS
T02268
Symbol
rpoC
Name
(GenBank) RpoC: DNA-directed RNA polymerase, beta\' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dto
Desulfobacula toluolica
Pathway
dto03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dto00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TOL2_C34870 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dto03021
]
TOL2_C34870 (rpoC)
03400 DNA repair and recombination proteins [BR:
dto03400
]
TOL2_C34870 (rpoC)
Enzymes [BR:
dto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TOL2_C34870 (rpoC)
Transcription machinery [BR:
dto03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TOL2_C34870 (rpoC)
DNA repair and recombination proteins [BR:
dto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TOL2_C34870 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Rotamase_2
RPOC_hybrid
Apocytochr_F_C
Rotamase_3
Alpha_E2_glycop
LPD39
Motif
Other DBs
NCBI-ProteinID:
CCK81644
UniProt:
K0NBF6
LinkDB
All DBs
Position
complement(4069474..4073853)
Genome browser
AA seq
1459 aa
AA seq
DB search
MDNIYDFFAKPKDPKIYKGVQITLASSDQIREWSHGEIKKPETINYRTFKPERDGLFCAK
VFGPTKDYECNCGKYKRMKHRGVVCEKCGVEVIQSKVRRERMAHIELASPVSHIWFLKSL
PSKIGNVLDLTLKNLEKVLYFDSYLVIDPKDTGLKKLQLLSDDQYYEAVETFGDDFEAGI
GAEAILKLLEDINLQEVHDELKEEISLTKSVAKKQKMAKRLKVIDAFLTSGIEPTRMILT
ACPILPPDLRPLVPLEGGRFATSDLNDLYRRVLNRNNRLKRLVDLNAPDIIVRNEKRMLQ
EAVDVLFDNGRHGRVVTGTNKRPLKSLSDTLKGKQGRFRQNLLGKRVDYSGRTVITVGSE
LRLHQCGIPKKMALELFKPFIYNYLEQKGLVSTVKSAKKMVEREETEVWDALESVVKEYP
VMLNRAPTLHRLGFQAFEPVLIEGKAIQLHPLVCPAFNADFDGDQMAVHVPLSLESQLEA
RIMMLSTNNILSPANGQPIIVPTQDIVLGIYYMTRAVQNQKGSGVSFSSIEEVRYAFDSG
ELSLHAKIKVRIDGEMYDTTTGRILLWESIPGDTLLSLSRIRTQTLEDAEAAMEELKAGN
DFDKVLKKYSDDEIKKTKGKTGLLTRKEFKNIFQVSEIVVEQFYGLKEGQFTDVRKVGNY
YTIFKVDERETTLPFNLVNKLMDKSSIVKLIDYAYRNIGLKETVILSDRLKDIGYKYSTL
GGLSICIDDMIIPDEKWEIIAKSEKNIEDIKNQYSEGLITQGEKYNKVVDIWAQATDDIA
NAMMEVMKNPTRGKIDGSPEDYNAVYVMADSGARGSKDQMRQLAGMRGLMAKPSGEIIEN
PITACFREGLSVLQYFISTHGARKGLADTALKTANSGYLTRRLADVGQDCTIVEIDCGTI
NGIEVEALYEGGEIIQTLGERILGRVTQEDIRDPYSDEFIVGVDTELEESHVKRIEEAGV
QKVKIRSVLTCNSKNGVCSRCYGRDLAHGVTVEIGQAIGIVAAQSIGEPGTQLTMRTFHI
GGTASRKVEVAEIKARVGGILKYNEDIQTVISAENEVIVMNRKGAGINIVGEEGRERAKE
TVIYGATLHLKDGQQVQPGDVIATWDPFTTPIITEVSGRVRFADIEVGNTVQEQIDPVTG
KVSRTITEGKDSEIRPRITIKDKEGKAVKLPKSKTSARYYLPVNAILTVEEDEQIMAGDV
IAKLPRATTKTKDITGGLPRVAELFEVRKPKDPGMLTEIDGYVLVSKGTKGRQKVTITPT
DVGGKKEYAIPKGQHVTVYDGDYVKAGDPLIAGSANPQDIMNIKGEVALAKYLVDEVQEV
YRLQGVRINDKHIEVVIRQMMRRVKVIETGDTNFIPDEQVDRIHFAEVNREVAGMGGETA
KGEPLILGITKASLSTDSFLSAASFQETTKVLTLAAIEGKYDGLKGLKENVVMGRIIPAG
TGFPGYSDVEVALGDVAQV
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
ttggataatatatacgatttcttcgcaaaaccaaaagatcctaagatttataagggcgtt
caaataacccttgcatcttcagaccagattagagagtggtctcatggtgaaatcaaaaaa
ccggaaaccataaattaccggacattcaagccggaaagagacggacttttttgtgcaaag
gtattcggtcctaccaaggattacgagtgcaattgcggtaaatacaaacgtatgaaacat
cgcggggttgtgtgtgaaaaatgcggtgttgaagtaattcagtccaaagtgcggcgagag
aggatggcacatatcgaacttgcttctccggtgtctcacatctggtttttgaaaagtctt
cccagcaaaataggcaatgttcttgatttgacattaaaaaatcttgaaaaagttctttat
tttgactcctatcttgtgattgatcccaaagatacgggtttgaaaaaacttcaacttctg
tcagatgatcaatattatgaggctgtggaaacttttggtgatgacttcgaggctggtatt
ggtgcagaagccattttaaagttgctcgaagatattaaccttcaagaggttcatgatgaa
cttaaagaagagatcagcctgaccaaatccgttgccaagaaacaaaaaatggccaagcgc
cttaaagttattgatgcatttttgacctcggggattgagcccacacggatgattttgacg
gcctgtcccattttgccgccggatttaaggccgcttgtgcctcttgaaggtgggcggttt
gcgacatctgatttaaatgacttgtatcgcagggtattaaacagaaacaaccgtctgaaa
agattggtagaccttaatgcacctgatatcattgtcagaaatgaaaaaaggatgcttcag
gaagccgtagatgtgctgtttgataatggtcgtcacggaagggtggtgaccgggaccaat
aagcggccgttaaagtctttaagtgacacattaaaaggaaaacagggcaggttcagacag
aatctgcttggcaagcgtgtggattactccggtcgtaccgttattacagttggttctgaa
ctgcggcttcatcaatgcggtatccctaaaaagatggctctggagctgtttaagcctttt
atttataattatcttgaacaaaaaggccttgtttcaacggttaaaagtgctaaaaaaatg
gttgaacgtgaggagaccgaggtttgggatgcacttgaatctgttgtaaaagaatatccg
gtgatgctcaaccgcgcacccacactccatcgtctcgggtttcaggcatttgagcctgtg
ctgatcgaagggaaagccattcagcttcatccattggtttgtcctgcatttaatgcagac
tttgatggtgatcagatggcggttcatgtgccactttcccttgagtctcagcttgaggca
aggattatgatgctgtctacaaacaatattctttctcctgcaaatggtcagccgattata
gtaccgacccaggatattgtgctgggtatttattatatgactcgagccgtgcagaatcaa
aaaggttctggggttagtttttcaagtattgaagaagtaagatatgcgtttgattcaggg
gaactttcgcttcatgccaaaattaaagttcgaattgatggtgaaatgtatgataccaca
acgggtcgaattcttctttgggaatccattccaggtgatacgcttttgtcattgagcagg
atcagaacccaaaccctggaagatgctgaagccgcaatggaagaattaaaagccggcaat
gattttgataaggttttaaaaaaatattctgacgatgagattaaaaagaccaaaggaaaa
acaggtcttcttaccagaaaggaatttaaaaatatatttcaggtgtcggagattgttgtt
gaacaattctatggtctcaaagagggtcagtttacggatgtcagaaaagtggggaattat
tataccatatttaaagtggatgaacgagagaccactttgcccttcaatcttgttaacaag
cttatggacaagtcttctattgttaaactgatcgactatgcataccgtaatatcgggtta
aaggaaaccgttattctttctgatcggctcaaggatatagggtataaatattcgactctg
ggaggtttgtcaatttgtatagacgatatgattatcccggatgaaaaatgggaaattatt
gccaaatcagaaaaaaatattgaagatataaaaaatcagtattccgaaggattgattact
cagggtgaaaagtataataaggtggtcgatatctgggctcaggcaacggatgatattgcc
aatgccatgatggaagtcatgaaaaatccgacacgcggaaagattgacgggtcacctgaa
gattataatgcagtgtatgtcatggctgactccggggctcgaggcagtaaggatcagatg
cgtcagctggcagggatgaggggtttgatggccaaaccgtccggtgagattattgaaaat
ccgattaccgcctgtttccgggaaggcctgtccgtactgcagtattttatttcaacacat
ggtgcgcgcaagggattggctgatacggccttgaagaccgcaaactctggatatcttaca
agacgtctggctgatgtgggtcaggactgtaccattgttgaaattgattgcggtactatt
aatggtattgaggttgaagcattgtacgaggggggggaaattattcaaacccttggcgag
agaatccttggaagggtgactcaggaagatatccgggatccttactcggatgaatttatt
gttggcgtggacaccgaacttgaggaaagccatgtcaaaagaatagaagaagccggagtt
cagaaagttaaaattcgttccgttctgacgtgtaattcaaaaaatggtgtttgttccagg
tgctacggaagggatcttgcccatggtgtaactgttgaaatcggtcaagccattggtatt
gttgcggctcagtccattggtgaacctggaactcagttgaccatgagaaccttccatatt
ggtggtactgcttcaagaaaggtagaggttgcggaaatcaaggccagggttggaggtata
ctgaaatacaatgaagatatccagacggtaatttctgctgaaaatgaagtaatagtaatg
aaccggaaaggtgccggtattaacattgttggagaagaagggcgtgaaagagctaaagag
acggttatttatggtgcaacccttcatcttaaagatggtcagcaagtccaaccaggggat
gtgatcgccacatgggatccgtttaccacgccgattatcacggaagtatccggtcgtgtt
agatttgccgacatagaggtcggaaacacggttcaagaacaaatcgaccctgtaaccgga
aaagtttcccgtacaatcacagaagggaaagatagtgagattcgtcccagaattaccatt
aaggacaaagagggaaaagcggttaagcttcccaagtccaagacttctgccagatattat
ttgcctgtgaatgccattcttacggttgaagaagacgaacagattatggcgggggatgta
attgcaaaattgcccagggcgaccacaaaaacaaaggacattaccggtgggcttccaaga
gttgccgaattgtttgaagtcagaaaaccaaaagatccgggtatgctgactgagattgac
ggatatgtcttggtgtccaaaggtacaaagggaaggcagaaagtcacgatcaccccgacg
gatgttggaggaaagaaagaatacgccattccaaaaggtcaacatgttacggtctatgat
ggtgattatgtaaaggcgggtgatccgctgattgccggaagtgcaaatccccaggatatt
atgaacatcaagggagaagttgctttggcaaaatatctggtggacgaggtgcaggaggtt
tacaggcttcagggtgtaaggattaatgacaaacatattgaggtggttatccgtcagatg
atgagacgggtaaaggtcattgagacaggtgataccaactttattccggatgaacaggtc
gacaggattcattttgcagaagtcaatcgggaagtagccggtatgggtggtgaaaccgca
aaaggggagccgttaattcttggtattacaaaagcatcattatctactgatagttttctt
tcagccgcatcattccaggaaacaacaaaagtgctgactcttgctgctatagagggtaag
tatgacggccttaaaggattgaaagaaaatgttgtgatgggtcgtattatacctgcaggg
acgggtttcccgggatacagcgacgtagaagttgctttgggtgacgtagcgcaagtttga
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