Candidatus Desulfovibrio trichonymphae: RSDT_0601
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Entry
RSDT_0601 CDS
T05578
Symbol
vsr
Name
(GenBank) DNA mismatch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtr03400
]
RSDT_0601 (vsr)
DNA repair and recombination proteins [BR:
dtr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
RSDT_0601 (vsr)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
BAV92113
UniProt:
A0A1J1DQK3
LinkDB
All DBs
Position
complement(792430..792852)
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AA seq
140 aa
AA seq
DB search
MDKISRETRSRNMANIKGKNTKPEKLVRSVLHGMGFRFRLHVKKLPGSPDIVLPRYKSLI
FVHGCFWHGHEGCKRATIPTTRADFWRTKISSNKERDAQNLADLAKLGYRCLIIWQCEMK
DTAILKQRLSTFLHDTASLS
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaataagcagggaaacacgcagccgcaatatggccaacatcaaaggcaaaaac
accaagcctgaaaaactggtgcgcagtgtattgcatgggatgggatttcgatttcgactg
catgtgaaaaagctccctggtagcccggacatcgtgttgccgcgctataaaagccttatc
tttgtacatggttgtttttggcatgggcatgaagggtgcaagcgggcgacaatcccaaca
accagagcggatttctggcgtacaaaaataagcagcaacaaagagcgtgacgctcaaaac
cttgccgatttggcgaagttaggctatcgttgtctgataatttggcagtgtgaaatgaag
gatacagcaatattgaaacaacgactgtcgacatttttgcacgatactgcgagcctatca
taa
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