Dyella thiooxydans: ATSB10_22980
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Entry
ATSB10_22980 CDS
T04308
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dtx
Dyella thiooxydans
Pathway
dtx00300
Lysine biosynthesis
dtx00550
Peptidoglycan biosynthesis
dtx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ATSB10_22980
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ATSB10_22980
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dtx01011
]
ATSB10_22980
Enzymes [BR:
dtx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ATSB10_22980
Peptidoglycan biosynthesis and degradation proteins [BR:
dtx01011
]
Precursor biosynthesis
Amino acid ligase
ATSB10_22980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
Fpg-like_C
Motif
Other DBs
NCBI-ProteinID:
AND69752
UniProt:
A0A160N333
LinkDB
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Position
complement(2448669..2450147)
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AA seq
492 aa
AA seq
DB search
MTIQRLDQLLQGLADTAPWGGLAVSGLTLHSRDARPGVAFVALRGTRQHGMAFAADAVAR
GAVAVIAEAPVPSDLPELGVPVVWVNGLAARIGEIAARFHGEPSRHLRVIGVTGTNGKTS
TVQLLAQALHALGHRAATIGTLGTGLVGELREGERTTPDAINVQATLAAFRDAGASHVAM
EVSSHALVQGRVNGVAFELAAFTNLTRDHLDYHGTMKAYGEAKARLFAWPGLRAAVINVD
DAFGAALAERLPAGVAVLRVSAAGLGGADVVAEQVVTSGEGLAFLLRTPWGSRPVRSPLL
GRFNVANLLTVVACLGALGESFEDIVEAVQALAPVNGRMNRLGDGLRQPLVVVDYAHTPD
ALEQALTALRAHCAGRLLCVFGCGGERDAGKRPVMGAIAERLADVAIVTDDNPRGEDGDA
IVAQIVAGFADPARARVERDRETAIRLALSMARAGDVLLVAGKGHETYQEGAHGKRPFDD
MEVARVALEACA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccagcgactcgaccagttgctgcagggcctcgccgacaccgccccatggggc
ggtcttgccgtttccgggctcaccctccattcgcgcgatgcccggccgggtgtcgcgttc
gtcgccctgcggggcacccgccagcacggcatggcgttcgccgccgatgcggtggcgcgt
ggtgcggtggcggtgatcgccgaggctccggtgccgtccgacctgcccgagctgggggtg
ccggtggtgtgggtgaacggtctggccgcgcggatcggcgagatcgccgcgcgcttccat
ggcgagccctcgcggcatttgcgcgtgatcggcgtgaccggcaccaacggcaagacctcc
accgtgcaactgttggcgcaggccctgcacgcgctcggccatcgggcggcgacgatcggc
acgctcggcacgggactggtcggcgagctgcgcgagggcgagcgcaccacgccggatgcg
atcaatgtgcaggccacgttggcggcgtttcgcgacgccggggccagccacgtggcgatg
gaggtctcctcccacgcactggtgcaggggcgggtcaacggagtcgcgttcgagctggcc
gccttcaccaatctcacccgcgaccatctcgactaccacggcaccatgaaagcctacggc
gaagccaaggcccgcctgtttgcttggccgggactgagggccgccgtgatcaacgtcgat
gacgcgttcggtgcggcgctggccgagcgcctgccggccggggtggcagtcctgcgcgtg
agcgccgccggcctgggcggtgcggacgtggtggccgaacaggtggtgacgtctggcgaa
ggccttgccttcctgctgcgcacgccctgggggtcccggccggtgcgcagcccgctgctg
ggccgcttcaacgtggccaacctgctgaccgtggtggcctgcctcggcgcgctgggcgaa
tcgttcgaggacatcgtcgaggcggtgcaggcgctggcgccggtcaatggccggatgaac
cgcctcggcgacggtctgcgccagccgctcgtggtggtggactacgcgcacacgccggac
gcgctggagcaggccctcacggcactgcgtgcgcactgcgccggtcgcctgctgtgcgta
ttcggctgcggtggcgagcgcgatgccggcaagcgtccggtgatgggggcgattgccgag
cggctcgccgatgtggcgatcgtcaccgacgacaacccgcgcggcgaggatggcgacgcc
atcgtggcgcagatcgtggccggctttgccgatccggcgagggcacgcgtggagcgtgac
cgcgagacggcgatccgcctggcgctgtcgatggcccgtgccggcgacgtgctgctggtg
gccggcaaaggccacgaaacctatcaggagggcgcgcacggaaagcgcccgttcgacgac
atggaagtggcgcgcgtcgcgctggaggcctgcgcatga
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