Dyella thiooxydans: ATSB10_28950
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Entry
ATSB10_28950 CDS
T04308
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dtx
Dyella thiooxydans
Pathway
dtx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATSB10_28950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtx03400
]
ATSB10_28950
Enzymes [BR:
dtx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ATSB10_28950
DNA repair and recombination proteins [BR:
dtx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ATSB10_28950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
P2_Phage_GpR
Motif
Other DBs
NCBI-ProteinID:
AND70349
UniProt:
A0A169GWB7
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All DBs
Position
complement(3108511..3109290)
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AA seq
259 aa
AA seq
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MKIASWNVNSLNVRLPHLTQWLADAQPDVVALQETKLEDAKFPVDALAAAGYRTVYSGQK
TYNGVALLARADSQPEFADVVTDIPGLDDPQRRILAATVGELRVVDLYVVNGKAVGDEKY
AYKLDWMARVREFLAGELERHPNLVVLGDFNICPDDRDVYDPVAWGEDILCSPPERAALK
AITDLGLHDSFRLFEQDAGHFSWWDYRQAAFRRNMGLRIDLILIGEALKPRVRAAAIDRE
PRRWERPSDHTPVTLDLDI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccagctggaacgtcaactcgctcaacgtgcgcctgccgcacctcacccag
tggctcgcggacgcgcagccggacgtggtggcactgcaggaaaccaagctggaggacgcc
aaattcccggtcgatgcgctggctgccgccggttaccgcacggtgtactccggccagaag
acctacaacggcgtcgccctgctcgcccgcgcggacagccagcccgaattcgccgacgtg
gtcaccgacatccccgggctggatgacccgcagcggcgcatcctggccgccacggtcggc
gaactgcgcgtggtcgacctgtacgtggtcaacggcaaggcggtgggcgacgagaaatat
gcctacaagctggactggatggcgcgggtacgcgagttccttgccggcgagctcgagcgc
catcccaacctcgtcgtgctgggcgacttcaacatctgcccggacgaccgcgacgtctac
gatccggtggcgtggggcgaggacatcctgtgctcgccgccggagcgtgcggcattgaaa
gcgatcaccgacctgggcctgcacgacagcttccgcctgttcgaacaggacgcgggccac
ttcagctggtgggactaccggcaggccgccttccggcgcaacatgggcctgcgcatcgac
ctcatcctgatcggcgaagcgctcaagccgcgcgtgcgcgccgccgcgatcgaccgcgaa
ccgcgccgctgggagcgcccctccgaccacacgccggtcacgctggacctggacatctga
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