Dermabacter vaginalis: DAD186_12690
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Entry
DAD186_12690 CDS
T04434
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dva
Dermabacter vaginalis
Pathway
dva03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DAD186_12690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dva03400
]
DAD186_12690
Enzymes [BR:
dva01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DAD186_12690
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DAD186_12690
DNA repair and recombination proteins [BR:
dva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DAD186_12690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-TFIIB
NFACT_N
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
ANP27819
UniProt:
A0A1B0ZIK1
LinkDB
All DBs
Position
complement(1429229..1430191)
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AA seq
320 aa
AA seq
DB search
MPELPEVEVVRRGLEPYVASRVIERVEVLDARSLKRHTGGAESFVRQLEGRRIRSVARRG
KFLWAPLSDAGCAPSIPPPHGEALVIHLGMSGQLRVRDGAGRGASQASEPHVSEGPASDP
EKHLRIRLHMAGGSRIDFLDQRIFGGMHVSPLVNTPDGLAAGTGTKLPLIPESAAHIARD
LLDPALDEESLVRRIRMRRAPIKSVILDQGTVSGVGNIYADEALWEAKLHFARSANGISS
RKIRELLRACRDVMNRALEVGGTSFDALYVNVDGRSGYFARSLNAYGKHGTPCPRCGRAL
VRVQFQNRSSHLCPYCQRRR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagcttcccgaggttgaggtcgttcgtcgaggcctcgagccgtacgtggcctcg
cgcgtgatcgaacgcgtcgaagtgctcgatgcgcgctcgctcaagcgccacactggcggt
gcagagagtttcgtgcgtcagctcgagggacgccgcatccgctcggttgcgaggcgaggg
aagttcctgtgggcgccgctgtccgacgcgggctgcgctccctcgattcctccgccgcat
ggcgaagcactcgtcatacatctgggcatgagcggccagcttcgtgttcgcgacggggca
gggcgtggggcgagccaagcgtcggaaccgcacgtgagcgagggccccgcaagcgatccg
gagaagcatctgaggattcgcctccacatggctggcggcagccggattgatttccttgac
cagcggatttttggcgggatgcacgtgagcccgctcgtgaacacccccgatgggctcgcg
gcgggcactggcacgaagctcccgctcattcccgagagcgccgcgcacatcgctcgagac
ctgctcgatcccgccctcgacgaggaaagcctcgtgcgtcgcattcgaatgcgtcgcgcc
cccatcaaatcggtgatcctcgaccagggcacggtgagcggcgtgggcaatatctacgcc
gatgaggcgctgtgggaggcgaagcttcactttgcacgatcagcgaatgggatctcaagc
cgaaaaatcagggagcttcttcgtgcgtgccgcgatgtcatgaaccgtgcccttgaggtg
ggcggcacgagtttcgatgcactttacgtgaacgtcgatggccgaagcggctatttcgcg
cgatcactcaatgcctacggtaagcacggcacgccgtgcccacgctgcggccgcgccctc
gtacgagtccagtttcaaaaccgctcgagccatctctgcccttactgccagcgccgccgc
taa
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