Drosophila virilis: 6628617
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Entry
6628617 CDS
T01066
Symbol
PDZ-GEF
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X2
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
dvi
Drosophila virilis
Pathway
dvi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
6628617 (PDZ-GEF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
PDZ_6
RA_2
cNMP_binding
PDZ_2
Tcp10_C
Motif
Other DBs
NCBI-GeneID:
6628617
NCBI-ProteinID:
XP_002051337
UniProt:
B4LQV8
LinkDB
All DBs
Position
4:20422276..20432232
Genome browser
AA seq
1593 aa
AA seq
DB search
MDPYHHIRHHYPPTSTAGSTVVGSGTTGSINRPELHQKCNRGSHSSDTSSAYSGSDTMAS
VYGSSLEAEEIDLSGLVESVVDSDEEDLAESMDSLNVRDAVRDCLEKDPSERSEDDVEIL
LEFTQGLKAFTNITLAVRRALCSVMVFAVVDKAGTVVMSDGEELDSWSVLINGAVEIEHA
NGTREELQMGDSFGILPTMDKLYHRGVMRTKCDDCQFVCITQTDYYRIQHQGEENTRRHE
DEQGRIVMVTELRSIGGSGAESATTTGSGSAATAHLNTKRGHVVIRGTPERLLQQLVEEN
SMTDPTYVEDFLLTHRIFIHNPQEVTRKLLHWFDLEQLDSHKTQELRDRVTRVVLLWVNN
HFTDFEADHEMMEFLEIFEAGLESKKLLSQLRLLHIACAAKARMRSCILTRSSRDEPLNF
QIIGGYELRGVAAATGNASVGIYISHVEPGSKAQDVGLKRGDQIHEVNGQSLDHVTSKRA
LELLTGTTHLSIQVKSNLLGFKEIMQALEHGSGSSSAGGGISSTGSGNGSFKSLRSPRRI
CANDIAKLHGRSDSTTEELTNRAHMVRLSSVDMLLDQPDCAPPQTPPVSAGSGNMASNFM
QQLLQSVNSNSAKKCSAEDSKPGGFMTLAPKRRLQKALAKMNLLNKQQQPHVGGSLNDSS
DTLLNEPQSKAKLSAASSGSSSCHSTNGVCTTSGRLYQSQSNPDLSSLNYDNSGEPSATL
QVNYLQAHLHRPSAASTLTSSSMLPPDYPEHVLKVYKSDQTCKYVLIYKETTAHEVVMLT
LQEFGIHDPSSNFSLCEVSVGEGGMVKQRRLPDQLQNLAERISFAARYYLKLNDSTEPLV
PDELALELVRESGVHFLQLNAYELAIQLTLQDFANFRQIESTEYIDELFELQSKYGVPML
SKFSELVNREMFWVVSEICAEHNIVRRMKIVKQFIKIARHCKECRNFNSMFAIISGLGHG
AVSRLRLTWEKLPSKYQRLFNDLQDLMDPSRNMSKYRQLVSAELLAQHPIIPFYPIVKKD
LTFIHLGNDTRVDGLINFEKLRMLSKEVRLLTHMCSSPYDLLAILELKGQTPSNALFSLN
QMSASQSNAAAGTVIAANAGQATIKRRKKSTAAPNPKKMFEEAQMVRRVKAYLNSLKILS
DEDLLHRLSLECEPPHGSTYSGSISHGNSSHRSAGSGSIGGTGGSGGGTGTGSINAGGDQ
LSIYSHTSSSSAPNSSLSLRKRHPSSPTLSTTSSTSSTSDHQRQRQQLHNNGPKFGTASP
QAVKKMLSLSESSKIRPHQPFVPRHSSALPGVIPPLHHLHAAHGFSTPAVSGGGVVAAAA
VSAGVANAQCTPSPSPCAHRRLASGGNILPTRAIHERSHSDTPAPPPPLPSVDLSLESSS
VTTFRDLPLRKSVTSGSVSSCDSGHGSYAQQQQPHHQQHHLTYQQQQQQQQQQQQQQQIA
HNEPSPPVYTAADCRLLQQISNNAVTRNLNSPCQSTSTPPSTPTPPPPTLQQQQQQQQQQ
LAPPPPPTAACIQPPQLPAPPAPYLHMRSHQQLQQIQQQLAMPPPPPPVYTSSLYNHHHS
NATSRHLNHMHGGPPNFMDSTKCTICPMPPMNQ
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggatccatatcatcatatcagacatcattatccacccactagcacagccggctcaacg
gtggttggcagcggcaccaccggctcaataaatcgaccagaattgcatcaaaaatgcaat
cgtggctcgcactcgagtgacacaagttcagcgtacagcggcagcgatacaatggcctct
gtctatggatcatcgctggaggccgaggagattgatctctccggcctcgttgagtctgtg
gtggactccgatgaggaggatcttgccgagagcatggatagcctcaatgtgcgtgatgcc
gtgcgagattgcctcgagaaggatccgtcggagcgcagcgaagatgatgtggaaatactg
ctggagtttacgcagggcctcaaggcattcacaaacataacgctggcggtgcgacgcgcc
ctctgctccgtgatggtgttcgctgtggtcgataaggccggcacagtcgtcatgtccgat
ggcgaggagctggattcctggtcggtgctaatcaatggcgccgtggaaatcgagcatgcg
aatggcacacgcgaagagctccaaatgggcgattcctttggcatattgcccacaatggat
aagctatatcatcgcggcgtgatgcgcaccaaatgcgatgattgtcaatttgtgtgcatc
acacaaaccgattactatcgcatacagcatcagggcgaggagaatacgcgcaggcatgag
gacgaacagggacgcattgtgatggtcaccgaactgcgctccattggcggcagcggtgcg
gagagcgcaaccacaacaggcagcggctcggcagccacagctcatttaaatacaaagcgc
ggtcatgtggttattagaggcacacctgagcggctgctacagcagcttgtcgaagagaac
tcgatgacggatccgacatatgtggaggatttcctgctaacgcatcgcattttcatacac
aatccgcaagaggtgaccagaaagctattgcactggttcgatctggagcaactggattcg
cacaaaacccaagagttgcgcgatcgtgttacccgcgtcgtgctgctctgggtgaacaat
catttcacagattttgaggctgatcacgaaatgatggagttcctggagatctttgaggct
ggcctggaaagtaaaaagctgcttagtcagctccgtttgctgcacatcgcgtgtgcagcc
aaagcgcgcatgcgcagttgcattttaacgcgctcttcacgcgatgaaccacttaatttc
caaatcattggcggctacgaactgcgcggcgtggccgcagctacgggcaatgcctcggta
ggcatatacatatcgcacgtggagccaggctcaaaggctcaggatgtgggcctcaagcgt
ggcgatcagatacacgaggttaatggccaatcgttggatcatgtgaccagcaagcgtgcc
ctggaactactgacgggcaccacgcatttgagcattcaggtgaaaagcaatttgctaggc
ttcaaggaaattatgcaggcactggagcatggcagcggcagcagctctgcaggcggtggc
atcagctccaccggcagcggcaacggcagctttaaaagcttgcgcagtccacggcgcatt
tgcgccaacgatattgccaagctgcatggacgcagcgacagcaccaccgaggagctaacc
aatcgtgcgcacatggtgcgcctgagttccgtggacatgctactggatcagccggactgt
gcgccacctcagacgccgccggtgagtgcgggcagcggcaatatggcttcgaattttatg
caacaattgcttcaaagcgtcaattcaaattcggccaagaagtgcagcgctgaggacagc
aaaccgggaggcttcatgacgctggcgcccaaacggcgactgcagaaagccttagccaaa
atgaatctactcaacaaacagcagcagccgcacgtgggcggcagcctaaacgacagctcc
gacacgctgctcaatgagccacagtccaaggcaaagctatcggccgccagttctggcagc
agcagttgccattccacaaatggtgtctgcactaccagcggacgcctctatcaatcgcaa
tctaatccggatctgagcagtctaaattatgacaatagcggcgagccgagtgccacgctg
caagtcaactatttgcaggcgcacttgcatcgcccctccgctgccagcacactcacaagc
agctcaatgctgccgcccgactatccggagcatgtgctcaaggtgtacaaatcggatcag
acatgcaaatacgtgctcatctataaggagacgacggcgcacgaggtggtcatgctgacg
ctccaggagtttggcatacacgatccaagctcgaacttttcgttgtgtgaggtgagcgtc
ggggaaggcggcatggtaaagcagcgtcgtttgcccgatcagctacagaatctggcggag
cgcatcagctttgcggcacgctattatctcaagctaaacgacagcaccgagccgcttgtg
ccggacgaactggcgttggagctggtgcgcgagtcgggcgtgcatttcctacagctcaat
gcgtacgagctggccatacagttgacgctacaagattttgccaattttcgccaaatcgag
tccacggaatacattgatgagctgttcgagctgcagtccaaatacggtgtgcccatgctg
agcaagttctccgagctggtgaatcgcgaaatgttttgggtggtcagcgaaatctgtgcc
gaacacaatatcgtgcgtcgcatgaagatcgtgaagcagttcatcaagattgcgcgccac
tgcaaggagtgccgcaatttcaactccatgtttgccatcatttcgggtctgggccatggc
gccgtgtcgcgcctgcgcctaacctgggagaagctgccctcgaagtaccagcgtttgttc
aatgatctacaggacctgatggatccgtcgcgcaacatgtccaaatacaggcaactcgtc
tctgcagagctgctcgcccagcatcccatcatacccttctatccgattgtcaaaaaggat
ctaaccttcatacatctgggcaatgatacgcgggtggatggtttgattaatttcgaaaaa
ctgcgcatgctgtccaaggaggtgcgtctgctgacgcacatgtgcagctcaccgtatgat
ttgctggccatattggagctcaagggtcaaacgccctcgaatgcgctcttctcgctcaat
cagatgtccgcctcgcagagcaatgcagctgccggcacggtaattgctgccaacgctgga
caggctacgatcaagcggcgcaagaaatcgacggcggctccgaatcccaaaaaaatgttc
gaggaggcgcaaatggtgcgacgcgtcaaggcctacttgaacagtctcaaaatactaagt
gatgaggatctgctgcacaggctctcgctcgaatgtgagccaccgcatggctccacctat
tcgggcagcatttcgcatggcaacagctcgcatcgcagcgcaggcagcggcagcattggt
ggcaccggcggcagcggcggcggcactggcaccggcagcataaatgccggcggcgatcag
ctcagcatttattcgcacaccagctccagttcggcgccaaattcatcgctgtcgctgcgc
aagcgacatcccagttctccgacgctctctacaaccagctcaacgagttccaccagcgat
catcagcgtcagcgccagcagctacacaataatggacccaaatttggtactgcctcgccg
caggcggtcaaaaaaatgctctccctgtctgaatcctcaaagatacgcccgcatcagcca
ttcgtgccgcgtcacagttccgcgctgcctggcgtcatcccgccgctgcatcatttgcat
gcagcgcatggcttcagcacgccagctgtcagtggaggaggtgtggttgcagccgctgct
gtctcagcgggcgtggccaatgcgcagtgtacgcccagtcccagtccgtgtgcccatcga
cgcttggcatctggaggcaacatactgccgacacgtgcgatacacgagcgttcccattcg
gatacgcctgccccgccgccgcctttgccctccgtggatctatcgctggagagcagcagt
gtgacgacatttcgtgacctgccgctgcgcaaatccgtgacttccggttcagtttcatcg
tgtgacagcgggcatggctcctacgcccagcagcagcagccgcaccatcaacaacaccac
ttgacataccaacagcagcaacaacaacaacaacaacaacagcagcaacaacaaatagca
cacaatgaaccgtcgccacccgtttacacggctgctgattgccgcctcttgcagcaaatt
tcaaataatgcggtcacgcggaacttgaatagtccttgccagagcaccagcacaccaccc
agcacacccacaccaccaccaccaacactacagcaacaacaacaacaacaacaacaacaa
ttagcaccaccaccgccaccaacagctgcttgcatacagccaccacagcttcctgcaccg
ccagcgccctatttgcatatgcgcagtcaccagcaactgcagcaaatacaacaacaattg
gccatgccgccaccaccgccaccggtctacaccagcagcctatacaatcatcatcatagc
aatgccacaagcagacatctgaaccacatgcatggtggtccgccaaattttatggatagc
accaagtgtaccatatgccccatgccacccatgaatcaataa
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