Drosophila virilis: 6636462
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Entry
6636462 CDS
T01066
Symbol
Not1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X2
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dvi
Drosophila virilis
Pathway
dvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6636462 (Not1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6636462 (Not1)
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6636462 (Not1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
6636462 (Not1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_1st
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
DUF4327
Motif
Other DBs
NCBI-GeneID:
6636462
NCBI-ProteinID:
XP_015023900
UniProt:
A0A0Q9VXU7
LinkDB
All DBs
Position
5:complement(2723716..2736165)
Genome browser
AA seq
2546 aa
AA seq
DB search
MNVENQLKTPLTQIRNLVKHVNKRNFNESSEQIKQFIQDYGLEADRSCLRYLFTVLNLND
PAPNVTAQLQAKLLGAHLQRQLQCSSFVTNICLAFDQHFAKHKSLKPLALADLVGQVAKL
TGINKLCECIFALAVTHSSHPELRQSARENLRGSLPDLLDSYLGQNSAAATAAASGLHEI
SFDLLQYLLCCLSEYVSPQLEAQFLNKLREEFPREAVPLVLAPLLYRSPTTATTTTATAA
KSNEPTDAEEETTNTNTTNTSSWSSSNADNLNEVGIEDIYDHLCEIIFTNQGKNNIMDTS
WINLILEIGYEFTSSVEDCKNHLCCGAGGSRELQPKDVAKIVGLMCRRHSSLLDCNVNLP
TPANFWPGQGQQAAGSSSSNASQTAQQNSSSNNNNDGSSETSSAASEKKDKKDTTDATQT
WKPDVFVQALKELVPQLNWKEVCMELDHPEFVLKDRIGLDLLLTILRLATQSNLFPQPEC
IYRHWANTEGQLSLITTMLKNPDLFSFADYVFSQPALDVLKTPPDAENKEIAAWKSLHLV
EVLLSIADKGYFSQVHELFKFPAQNCPDVLFLALLHINPPLTPLRQDLFNQLIPTFLGNH
PNSNVILASAWSSTNFQLRPSIMNAMSEWYLRGNEFDQGKLSRILDVAQDLKALSSLLNA
RSHLFIIDLACLASRREYLKLEKWLSDKIRDHGEIFIQAMIKVLQRRCPQVTNSKLPEDQ
LPPKQAQLLPETVTTMINCLQACINTCIQPETAEMIMQMASNVAIMASKARAAQQQQQQQ
QQQQQQQQQQQQQQAGGPQGLVPPPPSILRGHRGMDLPGGGIVPGSVPPPPQPQQPFSGN
LNAQQMFGPGGGMDPLTNMSNNLAGLNLGGPNGAFNFGNMLTSPSRLMNPGANPYPPIPI
QIPAPPPPNVGNLGRMLPAGPQPTPTPPNPNNPVMADLQMPVSKEVEDEANSYFQRIYNH
QPNPTLSIDEVLDILQRFKESSHRREQEVFLCMLRNLFEEYRFFSHYPEKELQITAQLFG
GIIDRNLVPTFVALGLSLRCVLDALRKPEGSKLYYFGVTALDRFKTRLHTYNKYCEHIRS
IPHFSDFPQHLIQYVEFGMHGQEPPPQKLIGLSNTIPTSAIAQGATEPLYRANSMPGNMA
AAPNVQKQPVVVSHATRMKSIANATNIDTLLVAKQEEKVTVPPEPVQDKTAFIFNNLSQL
NIPQKCEEIKEIMTKEYWPWLAQYLVLKRASMEFNFHTLYYNFLDALKNVEINRYVTKET
LRNIKVLLRSDKGVINFSDRSLLKNLGHWLGMMTLGRNRPILQLDLDLKSLLAEAYHKGQ
QELLFVVPFVAKILESSAKSRIFKSPNPWTMGIMYVLGELHQEPDLKLNLKFEIEVLCKT
LNLELEKLKPVIYLKDPTRALLIEQQMSQPKPKVVEPPPQQQQQHQQQQQQQAQQQQQQA
QQQQQQQQQQQAQQQQQQPAQPQPPSAEVDPQAMLMNNNNNSNAPGSVSSPNLPTDPSQV
VLPPPEPRYSYVEVNVNNFQLIAQQLVLPPNIPFLHANPGIKHIVVNAIERTITDWLQPV
VDRSIRIACATTEQIIRKDFALDADENRMRTAAHQMVRNLAAGMAMITGKDEIARAISQN
LHKAFMAALTGVQSMADMQAASMQLANENVELVCAFIQKTSAEKSALEIDRRLSTDFETR
KIAREEGSRFVDAQILSYQQERLPEPVRLKVGPAPPTLYAVYSEFARSIPGFQQMSDRDI
ALFVPKPQDIQPPNVFANDESSMVYAEVANKMEAFMNTAINVPTLQLQASKMHMLLNALM
ATRRLRDQESAFNLLTRAVEGLTEGLINVQDHMEQMKLYRDIHLRILSLLHNSFGAPNTE
RAVTKCFFDIREEVRYNVEAARALITSHFVNLNQFDGMLRDCMDNGNNYVAVSFGIALLE
RLIMEDRAINIVSDNEFMATVELLGRLTQQRHRYPECIVNAIETLWSGNLNTSDYGSFNP
GERYLAGASHYIHSGMHHVRSCDTDDPPGLQEKTEFLLKDWVALYTQQNQLTTRDARNFG
AFVQKMNTYGILKTDDLITRFFRQATQICTDVVYRMFADPSLPINQAKNKIFQWIDAFVH
LIAMLVRHSGEAGNPTTKINLLNKVLGIVLGTLLKDHELRGVGFQQVGYHRFFMMLFMEL
CSADSTLESLMHSIVSAFAYTYHLLNPSVAPGFCFAWLELISHRVFLGRILVQIPGQKGW
PLYAQLLQDLFKYLAPFLRNTELGKPVGLLYKGTLRVLLVLLHDFPEFLCDYHFGFCDTI
PPNCVQMRNIILSAFPRNMRLPDPFTPNLKVDMLSDSSNAPKVCSSYIMNIQPPNFKKDL
DSYLKARAPVTFLSELRGHLQVTTEPGTRYNMTLMNALVMYVGTQAIALIRNKNFVPNTS
NIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCAVLHLFAEANSEAI
QEQITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWEHDFVHCAPEITKLFESVARSC
LAKSNVTQQLNMAVDGADSQEVVNIN
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagagaaccaattgaagacgccgctaacgcagattcgtaatttggtcaaacac
gtgaacaagcgaaattttaatgagagcagcgagcaaataaagcagtttatccaagattac
ggcctcgaagcggatcgtagctgtctgcgatatctgttcacggtacttaacttgaacgat
ccggcaccgaacgtcaccgcgcagctgcaggcgaagcttctcggcgcgcacttgcagcgg
caactgcagtgctcctcgtttgtgaccaacatatgcctcgccttcgaccagcattttgcc
aagcataagagtctgaagccattagcacttgccgatctcgttggacaggtggccaagcta
actggcattaacaaactttgcgagtgcatctttgcgctagcggtgacccacagctcccat
ccggagctacgccagagcgcacgtgagaatctgcgcggctcgctgcccgatctgctcgat
tcatatctgggccaaaattcagctgccgcaactgcagctgcgagtggtctgcacgagatc
tcctttgatctgttgcagtatttgttgtgctgcctgagtgagtacgtgagcccgcagctg
gaggcacagtttttgaataagctgcgcgaggagtttccgcgtgaggcggtgccattggtt
ctagccccgcttttgtaccgtagcccaacgacggcgacgacgacgacggcgacggcagcc
aaatcgaacgaaccaactgatgcagaggaggaaacgacgaacacgaacacgacgaacacc
agcagctggagcagctcaaatgcagataatctgaatgaagttggcattgaggatatctat
gaccatttatgcgagataatatttacaaatcagggcaaaaataatattatggacacatct
tggattaatttaatccttgaaatcggttatgaatttacatcgagcgttgaagattgcaaa
aatcatttgtgttgcggcgctggcggctcccgagaactgcagcccaaagatgttgccaaa
attgttggactcatgtgccgccggcactcgtcgctgctcgattgcaatgtaaatctaccg
acaccggcgaatttctggcccggacagggacaacaggctgctggcagcagcagctccaac
gcttcacaaaccgcacaacagaattctagcagcaacaacaacaacgatggcagcagcgaa
accagcagcgctgccagcgagaagaaggacaaaaaggatacaacagacgcaacacaaaca
tggaagccggatgtgtttgtacaggcgctcaaggagctggtgccgcagctcaactggaag
gaggtctgcatggagctcgatcatcccgagtttgtgctgaaggatcgcatcggcttggat
ctgctgctaaccatcctaagattggccacgcaatcgaatctgtttccgcaaccggaatgc
atttaccgccattgggctaacaccgagggtcaattgtcgctgataacgaccatgctgaag
aatccggatctgttctcctttgccgactacgtgttcagtcagccggcgttggatgtgctg
aaaacgccgcccgatgctgagaataaggagatagctgcatggaaatcgctgcatctggtt
gaggtgttgctctctattgcggacaagggctactttagtcaggtgcacgagctattcaaa
tttccggcacaaaattgtcccgatgtgctgtttctggctctgctgcacataaatccgccg
ttgacaccattgcgccaggatctgttcaatcagctaatacccacgtttctgggcaatcat
cccaattcgaatgtgatattggccagcgcctggagctccaccaattttcaactgcggccg
agcatcatgaacgccatgtctgagtggtatttgcgcggcaacgaattcgatcagggcaaa
ttgtcgcgcattctcgatgttgcacaggatctgaaggcgctctcctcgctgctcaatgct
cgctcgcatctgtttatcatcgatttggcctgtctggcatcgcgccgcgagtacttgaag
ctggagaaatggctgagcgacaagatacgcgaccatggcgagatcttcatacaggccatg
atcaaggtgctgcaacgccgctgtccgcaggtgaccaactcgaaactgcccgaggatcag
ctgccgcccaagcaggcgcaactgttgcccgaaaccgtgaccacaatgattaactgcctt
caagcttgcatcaatacttgcatacagccggagacggccgaaatgattatgcaaatggcc
agcaatgtggccataatggctagcaaggcgcgcgccgcacagcagcagcagcagcagcaa
caacaacaacaacaacagcagcagcagcaacaacagcaacaggctggcggtccgcagggc
ctggtgccgccgccgccaagtattttgcgtggacatcgcggcatggatttgccaggcggc
ggcattgtgcccggctcggtgccgccaccgccgcagccacagcaacccttctcgggcaat
ctgaatgcacagcaaatgtttggaccgggcggcggcatggatccgctgaccaacatgtcc
aacaatctggcgggcctcaatctgggcggtcccaatggagctttcaactttggcaacatg
ctgacatctccgtcgcgcctcatgaatcccggcgccaacccctatccgcccattccaata
caaatcccagcgccgccgccgccaaatgtgggcaatctgggccgtatgctgccagctgga
ccgcaaccaacgccaacgccaccgaatcccaataatccggtcatggccgatctacagatg
cccgtttccaaggaggtcgaggatgaggcgaactcatactttcagcgcatctataatcat
cagccgaatccgacactgtccattgacgaggtgctcgacatactgcagcgcttcaaggag
tccagccaccggcgcgaacaggaggtcttcctttgcatgctgcgcaacctgttcgaggag
tatcgcttcttctcccactatccggagaaggagctgcaaataaccgctcagctctttggc
ggcatcattgatcgcaatctggtgcccacattcgtggcactcgggctctcgctgcgctgc
gttctcgacgcactgcgcaaaccggagggctccaagctctactattttggcgtgacggca
ctcgatcgcttcaagacacgcctgcacacctacaacaaatactgcgagcacatacgctcc
ataccgcatttcagcgactttccgcagcatctcatccagtacgtggagttcggcatgcat
ggtcaggagccgccgccacagaaactgatcggcctaagcaacaccataccaacctcggcc
attgcccagggcgccacggagccgctgtaccgcgccaactcaatgcccggcaatatggca
gctgctccgaatgtacagaagcagcccgttgtagtgtcgcatgccacgcgtatgaaatcg
attgcaaatgcgaccaacattgatacactgctcgtggccaagcaggaggagaaggtgacg
gtgcccccggagccggtgcaggacaagacggcgttcatattcaacaatctcagccagttg
aatataccgcaaaaatgcgaggagatcaaagagatcatgaccaaagagtattggccctgg
ctggcgcaatatcttgtgctgaagcgcgcctcgatggagtttaactttcatacgctctac
tacaattttctggatgcgctcaagaacgtggagatcaatcggtatgtgaccaaggagacg
ctgcgcaacattaaggttctgctgcgctccgataagggtgtcatcaatttctcggatcgc
agcctgctcaagaatctcggccattggctgggcatgatgacgctgggtcgcaatcggccc
attttacagctggatcttgacctgaagtcgctgctggccgaggcctatcacaagggccag
caggagctgttgtttgtggtgccatttgtggccaaaatattggaatcatccgctaaatcg
cgcattttcaaatctcccaatccctggaccatgggcattatgtatgtgctcggcgagctg
catcaggaacccgatctcaagctgaaccttaagttcgaaatcgaggtgctctgcaagacg
ctcaatctggaactggagaagctcaaacctgtcatctacctgaaggatccaacacgggcg
ctgctcatcgaacagcaaatgtcacagccaaagcccaaggtggtcgagccgccgccccag
cagcagcagcaacatcaacagcagcaacagcaacaggcgcagcagcaacaacaacaggcg
caacagcagcaacaacaacaacaacaacaacaggcgcagcagcagcaacaacaaccagca
cagccgcagccaccgtcagctgaggtagatccgcaggcgatgctgatgaacaacaacaac
aactcgaatgcacccggttccgtttcatcgcccaacttgcccacagatcccagccaggtt
gtgctgccgccgccggagccgcgttactcctatgtcgaggtgaatgtgaacaatttccag
ttgattgcccagcagctggtgttgccaccgaatatacccttcctgcacgccaatccgggc
atcaagcacattgtggtgaatgccattgagcgcacaattaccgactggctgcagccggtt
gtagatcgtagcatacgcattgcgtgcgccaccaccgaacagattatacgcaaggatttc
gcattggatgcggacgagaatcgcatgcgcaccgccgcccatcagatggtgcgcaatctg
gccgccggcatggccatgataaccggcaaggatgagatcgcccgggctattagccagaat
ctgcacaaggccttcatggctgcgctgacgggcgtgcagagcatggccgatatgcaggcc
gcctcaatgcagctggccaatgagaatgtggagctcgtttgtgcgttcatacagaagaca
tccgctgagaagtcggcgctcgagatcgatcgacgtttgtcgacggactttgagacgagg
aaaatcgcacgcgaagagggcagccgatttgtcgatgcacaaatcttgagctatcagcag
gagcgcctgccggagccagtgcgtctcaaggtgggcccagcgccgccaacactttacgcc
gtctattcggagtttgcgcgcagcattcccggcttccagcagatgagcgaccgggacatc
gcactgtttgtgcccaagccgcaggatatacagccgccgaatgtgtttgccaacgatgag
agcagcatggtctatgccgaggtggccaacaaaatggaagcgttcatgaacaccgccatc
aatgtgcccacccttcagctgcaggccagcaagatgcacatgctgctaaacgctctgatg
gcgacgcgtcgcctgcgcgatcaggagtcggcgttcaatttgctgacccgtgccgtcgag
ggcctgacagagggtctgatcaacgtgcaggatcacatggaacaaatgaaactctaccgg
gacatacacttgcgcatacttagcctgctgcacaacagcttcggtgcacccaacaccgaa
cgggcggtgaccaaatgcttctttgatatacgcgaggaggtgcgctacaatgtggaggct
gcacgcgctctcatcacatcgcatttcgtcaatctgaatcagttcgatggcatgctgcgc
gactgcatggataatggcaacaattatgtggccgtctcctttggcattgcgcttctcgag
cgcctcatcatggaggatcgggccattaacattgtctccgacaatgagtttatggccacc
gtcgagctgctcggccggctcacccagcagcgtcatcgctatcccgagtgcattgtcaat
gccatcgagacgctctggtctggcaatctgaataccagcgattacggctccttcaatccg
ggtgaacgctatctggccggcgcatctcattacatacactccggcatgcatcatgtcagg
tcatgcgacacggatgatccgcctggcctgcaggagaagaccgagttcctgctcaaggat
tgggtcgcgctctacacacagcagaatcagctaacgacacgcgatgcccgcaattttggc
gcctttgtccagaagatgaacacatacggcatactgaagacggatgatttgataacgcgc
tttttccgtcaggccacgcaaatctgcacggatgtcgtctatcgcatgttcgccgacccg
agcctgcccattaaccaggccaagaacaagatattccaatggatcgatgcgtttgtccat
ctgattgccatgctggtgcgtcattcgggcgaggcgggcaatccgacgaccaagatcaat
ctgctcaacaaggtgctgggcattgtgctgggcacactgctcaaggatcatgagttgcgc
ggcgttggattccaacaggtcggctaccatcgcttcttcatgatgctcttcatggagctg
tgctccgccgacagtacattggaatcgttgatgcacagcatcgtgtcggcctttgcctac
acatatcatctgctcaatccgagcgtggcgcccggtttctgttttgcctggctggagcta
atctctcatcgcgtcttccttggccgcattctggtccagatacccggccagaaaggctgg
cccctatacgcccagctgttgcaggatctcttcaaatatctcgctccattcttgcgcaac
accgaattgggcaaacccgtcggcctcctatacaagggcacactgcgcgtcctgctcgtg
ctcctgcacgatttccccgagtttctgtgcgattatcatttcggcttctgcgacacaata
ccgccgaattgcgttcagatgcgcaacattatattgtcggcgtttccgcgcaatatgcgg
ctgcccgatccgtttacgcccaatctaaaggtggacatgctatcggacagcagcaatgcg
cccaaggtgtgcagcagctatatcatgaacatacagccgcccaatttcaagaaggacctc
gactcgtacttgaaggcgcgcgcccccgtcacattcctgtcggagctgcgcggccatctg
caggtgaccacagagccgggcacgcgctacaacatgacgctcatgaatgctctggtcatg
tatgtgggcacccaggccattgcattgatcagaaacaagaactttgtgcccaacacgtcg
aacattgcgcacagcgcccacatggacatcttccaaaacttggctgtggatctggatacc
gagggacgttatctgttcctcaatgccattgccaatcagctgcgctatccgaacagtcac
acccactatttcagctgtgcggtattgcatctgttcgccgaggccaattcagaggccata
caggagcagattacacgcgtcctgctcgagcgcttgattgttaatcgtccgcatccgtgg
ggcctgctgatcacattcattgagctgatcaagaatcccatttacaagttctgggaacat
gatttcgtgcactgtgcacccgagataaccaagctattcgaatcggtcgcccgctcctgc
ctggccaagtcgaatgttacccagcagctgaacatggccgtcgatggagccgatagccag
gaggtggtcaacattaactga
DBGET
integrated database retrieval system
