Defluviicoccus vanus: HQ394_11135
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Entry
HQ394_11135 CDS
T06814
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dvn
Defluviicoccus vanus
Pathway
dvn00300
Lysine biosynthesis
dvn00550
Peptidoglycan biosynthesis
dvn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dvn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HQ394_11135
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HQ394_11135
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dvn01011
]
HQ394_11135
Enzymes [BR:
dvn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HQ394_11135
Peptidoglycan biosynthesis and degradation proteins [BR:
dvn01011
]
Precursor biosynthesis
Amino acid ligase
HQ394_11135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Transpeptidase
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QNT69762
UniProt:
A0A7H1N226
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All DBs
Position
2425909..2428227
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AA seq
772 aa
AA seq
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MGAPLVPDPWREINTMTIAFGHGLAVTPLQLAVGVGAVVNGGTLLRPTLLRRDNDDPVPG
KMAISPKTSRQMCDLMRLVVEVGTGAKADVPGYEVGGKTGTAXEKLGHGRYIANARIASF
VGAFPMSDPRYVVLAMLDEPKGNKSTYNYATGGWVAAPVVGAVVRQMAPILGIPPEATQE
AAKPMGKTKGTGKPQKVAVRDAIARVQGXSRLRLTDLLEGIRITLTALDAERLEITGLAA
DSRKVEPGFLFAALPGSRADGVNFVGEAVRRGAAAVLAPKAAEASLRLALDQAPPVVLIC
DPNPRRLFALMAARFFGRQPETVAAVTGTNGKTSVVSFLRQIWTAAGRRAASLGTLGLTA
PGRSDAGSMTTPDPVALHRMLSSLVDAGVQCLAMEASSHGLDQCRLDGVRIAAGAFTTLG
RDHLDYHPNIEAYLSAKLRLFDALVVDGGAAVICADDLAAGRVRSAAAARGLRVLTYGRR
GEDLRLRGISPTADGQQLAVTVAGQDRLIELPLAGEFQALNALCALGLALATGTDAELAI
AALGRLEAVRGRLERVARVGGASIYVDYAHTPDALAVVLRALRPQVRRELAVVFGCGGDR
DPGKRPQMGEVARQFANRIVVTDDNPRSEEASAIRRQILTACPDALEIGDRAEAIAAAIA
ALQDGDVLVVAGKGHETGQVVGDRVLPFDDAAVIRHVVGGDCPVTDLTALWTSAAAAAAT
GAXSTGPWSATGVGIDSRSLVPGDLFIAIKGPSQDGHAFVAAALQRVRRQRW
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
gtgggggcgccgctggtccccgatccatggcgtgagatcaacaccatgaccatcgctttc
gggcatgggttagcggtgacgccgttgcaactggcggtgggcgttggagcggtggtcaac
ggcggcacgctgttgcggccgaccctgttgcggcgcgataatgacgatcccgtccccggc
aagatggcgatttcgcccaagacatcgcggcagatgtgcgatctgatgcgactcgtggtg
gaggtgggtaccggcgccaaggccgacgtgccgggatacgaggtcggcggaaagaccggt
actgccnncgaaaagcttggccatggccgctacatcgccaatgctcgcatagcctccttc
gtcggtgcgtttcccatgtcggacccgcgctacgttgttctggccatgctcgacgagccg
aagggcaacaagagcacctataactatgccaccggcggctgggtggcggcgccggtggtt
ggcgccgtggtgcgtcagatggcgccgatcctcggcattccacccgaggcgacacaggaa
gcagcgaaaccaatgggcaagacgaagggaaccggcaagccgcagaaggtggcggttcgt
gatgcgattgcccgcgttcagggannaagcaggttgcggctaactgacctcttggaaggg
atccggatcaccttgactgctcttgacgccgaacgattggaaatcaccggccttgccgcc
gattcacgcaaggtcgaaccaggcttcctgttcgccgccctccccggcagccgcgccgac
ggcgtgaacttcgtcggtgaggcagtgcggcgtggtgccgccgcggtgctggcgccgaag
gcggccgaggcatcgctgcggctcgccctcgatcaggcgcccccggtggtgctcatctgt
gatccaaatccgcggcgcctgtttgcgttgatggcggcgcgctttttcggtcggcagccg
gaaacggtggcggcggtgaccggtaccaacggcaagacctcngtggtttccttcctgcgt
cagatctggacagcggcgggacggcgggcggcaagcctcggcacccttgggctgacggcc
cccgggcggagcgacgcgggcagcatgaccacccccgatccggtggcgctgcaccggatg
ctcagctcactcgtcgacgccggggtccaatgtctcgccatggaggcctccagccatggc
ctcgatcagtgccgtctcgatggcgttcgcatcgcggccggcgcgttcaccaccctcggc
cgcgaccatctcgactatcatccgaatattgaagcttatctgagcgccaagctgcgcttg
ttcgatgcactggtggtggacggtggtgcggcggtgatctgcgccgacgatcttgctgcc
gggcgagtccgctcggccgccgcggcgcgtggtctgcgggtgcttacctacggccggcgt
ggtgaagacctgcggctgcgcggcatcagccccaccgccgacggacagcaattggcagtg
accgtcgccggccaggatcggctgatcgaactgcctctggcgggcgaatttcaggcattg
aatgccctctgtgcgcttggcttggcgctggctaccggcaccgatgccgaattggcgatc
gccgcgcttggccgactggaggcggtgcgtggccggctggagcgcgtcgcccgcgtcggt
ggcgcttcgatctatgtggattacgcccatacccccgacgcgttggcggtggtgctgcgg
gcgctgcgaccgcaggtgcgccgggaattggccgtggtgttcggctgcggcggcgatcgc
gaccctggcaagcgcccgcagatgggcgaggtggcgcgccagttcgccaatcgcatcgtc
gtcaccgacgacaacccgcgcagcgaggaggcgagtgccattcgccggcagattctcacc
gcctgtcccgacgcgctggagatcggcgatagggccgaggcgatcgccgcggccatcgcc
gcgctgcaggatggcgacgtgctggtggtcgccggcaagggacacgagacagggcaggtc
gtcggcgatcgggtgctgccctttgacgatgccgccgtcattcgtcacgtcgtcggngga
gactgcccggtgaccgatctcacggcgctctggacgagcgcagcggcagcggcggcgacg
ggggcgnnatcgaccggtccctggtcggcgaccggagtcggtatcgattcccgcagcctc
gtccccggtgatctgtttattgccatcaaggggccgtcgcaggacggccatgccttcgtc
gccgcggcgctgcagcgggtgcggcggcagcggtggtaa
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