Defluviicoccus vanus: HQ394_16365
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Entry
HQ394_16365 CDS
T06814
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
dvn
Defluviicoccus vanus
Pathway
dvn02024
Quorum sensing
dvn03060
Protein export
dvn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HQ394_16365 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HQ394_16365 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HQ394_16365 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dvn02044
]
HQ394_16365 (ffh)
Enzymes [BR:
dvn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HQ394_16365 (ffh)
Secretion system [BR:
dvn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HQ394_16365 (ffh)
Eukaryotic Sec-SRP protein
HQ394_16365 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_33
ParA
ArsA_ATPase
AAA_31
YqeC
VirC1
AAA_22
AAA_18
nSTAND3
ResIII
AAA_17
AAA_25
AAA_28
APS_kinase
AAA_5
NACHT
ABC_tran
AAA_16
AAA_7
AAA_14
KTI12
LytR_C
Motif
Other DBs
NCBI-ProteinID:
QNT70613
UniProt:
A0A7H1N4H7
LinkDB
All DBs
Position
complement(3566241..3567635)
Genome browser
AA seq
464 aa
AA seq
DB search
MFEGLTERLGTIFDRLRKRGALSEADVNEALREVRIALLEADVALPVVKDLINGIKARAV
GQEVLRSVTPAQMVVKIVHDHLIEVLSGGETDEKLRLGEGAGINLNASPPVPVLLVGLQG
SGKTTTAGKLAVRLRKREKKKVLLASLDIYRPAAQKQLAILGEQTETATVEIIPGQDALT
IAQRAMDQARRQGFDVVILDTAGRTAVDEQMMAEAAAVKAAVNPLETLLVADALTGQDAV
TLARSFHERVGITGIVLTRVDGDSRGGAALSMRGVTGCPIRLIGVGEKLDALETFQPDRI
AGRILGMGDVVGLVERAADLIEKEDAEKLALKLTKGEFTLEDMAKQFKQLRKMGDFKGIL
GMLPGIGKIQKQLDEAKVDDKMIARQEAIILSMTIEERHNPKLLNASRRRRIALGSGTTV
QDVNRLLKQHQMMSEMMKKVGKLGKRGLFGKGLPPGLLPPMPPR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgagggactgaccgagcgactggggacgatcttcgatcggctgcgcaagcgtggc
gcgctgagcgaggccgacgtcaacgaggcgctgcgcgaagtccgcatcgcgctgctcgaa
gccgatgtggcgctgccggtggtcaaggacctgatcaacggcatcaaagcccgcgccgtt
ggccaagaggtgctgcgcagcgtcaccccggcgcagatggtggtcaagatcgtccacgac
cacctgatcgaggtgctgtcgggtggcgagaccgacgagaagctgcgcctcggtgagggt
gccgggatcaacctgaatgcctctccgccggtgccggtgctgctggtgggcctgcagggc
tcgggcaagaccaccaccgccggcaagctggcggtgcggctacgcaagcgcgaaaagaag
aaggtgctgctggcatcgctcgacatctaccgccccgcagcgcagaagcagctcgccatc
ctcggcgagcagaccgagacggcaaccgttgagatcatccctggccaggatgcgctgacg
atcgcccagcgggcgatggatcaggcgcgccgccagggcttcgacgtggtcattctcgat
accgccgggcgcacggcggtcgacgaacagatgatggcggaagccgcggcggtgaaagcg
gcggtcaatccgctggagacactcctcgtcgccgacgcgctgaccggccaggacgcggtt
accctcgcccgctcgtttcatgagcgggtgggcatcaccggcatcgtcctcacccgggtc
gatggcgactcccgtggcggtgccgccttgtccatgcgcggcgtcaccggctgtccgatc
cggctgatcggcgtcggcgagaagctggacgcgctggagacgttccagccggaccgcatc
gccggccgtattctcggcatgggtgacgtggtcggcttggtcgagcgggcggcggatctg
atcgagaaggaagacgcggaaaagctcgcgctgaagctgaccaagggtgagttcaccctc
gaagacatggccaagcagtttaagcagctgcgcaagatgggcgacttcaagggtatcctc
ggcatgctgcccgggatcggtaagatccagaagcagctcgacgaggcgaaggtcgacgac
aagatgatcgcccgccaggaggccatcatcctgtcgatgacgatagaggagcggcacaac
ccgaagctgctcaacgcgtcacggcggcggcggatcgcgctagggtccggtaccaccgtc
caggacgtcaatcgcttgctcaagcaacatcagatgatgagcgagatgatgaaaaaggtg
ggcaagctcggtaagcggggcctcttcggcaaaggtttgccgccgggcctgctgccaccg
atgccgccgcgttga
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