Daktulosphaira vitifoliae (grape phylloxera): 126899203
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Entry
126899203 CDS
T09738
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126899203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126899203
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
126899203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
126899203
NCBI-ProteinID:
XP_050529755
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MSVKYVLVSDEEYGEAVELPLEENGTLLLTTLTAQFPGASGLKFRTENNVVRGVRLADER
FHVPDNEWGKTPYYCVFPKVENKRKIDDSVENPTAKTKKLETKLKCSDLVVLNIPYTYDE
QKLKEYFRQFGELLMLQIKRDKNGQSRGYGFLRYTNLESQVRVLSQRHKIDGRNCEVKIP
KSKEGNSSELSGKVFVGRVTEDLLAEDIREYFSKFGEVINVFVPKNPFRGFAFVTFLDPE
VAASLCGEDHIIKDVSVRVSEAAPKPQTPKNRHQTPPPIEPWERLNNCHNDNYRNWYHPQ
LDNRGNVDMPNLQSLGINGQDSYSPMMPLSPAIVAAALTQAAGWGLVNGRMMPPPSSSGG
NSNQWTHRNNYNNRKRSNNDYNSSSNR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttaaatatgttttggtatctgacgaagaatatggcgaagctgttgagcttcct
ttagaagaaaatggaacattattattgactaccttaactgctcaatttcctggagctagc
ggcctaaaatttcgcactgaaaataatgtagtgcgaggtgttagattagccgatgaacgt
tttcatgtacctgataatgaatgggggaaaactccatattattgtgtttttcctaaggtt
gagaacaaaagaaaaattgatgatagtgtggaaaatccaactgcaaaaactaagaaattg
gaaacaaaattaaaatgctcagacttggttgttctgaatataccatatacttatgatgaa
cagaaacttaaagaatatttcagacaatttggtgaactcctcatgttacaaattaaaaga
gacaaaaatggacaatctagaggttatggatttttacgctatactaatttagaatcacaa
gtacgtgtcttatcacagcgtcacaaaattgacggtagaaattgtgaagtaaaaattcca
aaatctaaagaaggaaatagttctgaactttctggcaaagtttttgttggtcgtgttact
gaagatttattagctgaagacattcgtgaatattttagtaaatttggagaagttatcaac
gtatttgtacctaaaaatccatttagagggtttgcatttgtaacatttctggatcctgaa
gtggcagctagtttatgtggagaagatcatattataaaagatgtttctgttcgtgtttcg
gaagctgcacctaaacctcaaactccaaagaaccgtcatcaaacacctccacctattgaa
ccctgggagcgattaaataattgtcataatgacaactaccgaaattggtaccatcctcaa
cttgataaccgtggtaatgtagatatgcctaacttacaatctctgggaataaatggacaa
gatagctatagtccaatgatgcctttaagtcctgctattgtagctgctgccctaactcaa
gctgctgggtggggcttagtaaatggtcgtatgatgcctcctccatcttcctctggagga
aacagcaatcagtggactcatagaaataactataataataggaaacgttctaataatgat
tacaactcgtctagcaatcgataa
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