Daktulosphaira vitifoliae (grape phylloxera): 126907726
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Entry
126907726 CDS
T09738
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126907726
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
126907726
3'-5' decay
Other 3'-5' decay factors
126907726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
ResIII
PAM2
AAA_22
PhoH
zf-CCCH
AAA_14
AAA_18
zf-C2H2_jaz
Helicase_RecD
AAA_24
Motif
Other DBs
NCBI-GeneID:
126907726
NCBI-ProteinID:
XP_050545187
LinkDB
All DBs
Position
Unknown
AA seq
1729 aa
AA seq
DB search
METNFSEVEHRAIEYLNHKQWSNAFLCFDQLLQNAIAKSLPSERLIGYLLGRSQCSLELK
KFEDVVYDSRHIISMLTNEDNAYSSRVRRNLVNALYSLKRYSEAEQAALEWIIRSENNSE
AKKMLETVRLVWSMSKDNITTSVQPLEDQLNQINEDLLFGDRLDSWIATGVGEQSRRNRK
HPVELVDDEKLIGQTMNNESIGVHNFDSNTRLYDRYNGADHAIGIICPSVFNHNGDTYDF
STYNTKSTKVFEESKKPTDLKFPKKTDMRYSCTYCGISFHLDNQLRAHCATESHQTVIMS
DEGRDWKWRPPPRGFSSECYTLCEAFAESEGAEGSCKYGAQCVEAHGLEELAEWKERFEY
RKMKLQRASENKLYGKSYTEQLLERWVQSTNPEKIMRESLDCVVETHDCDLVTTVESKTS
SRKWTFVLETISPLQAVALLQDTYRNHFSLKHILVDNGLQQIAFDMEPPNDQEWVSQAQH
PVSQSMSSKLRHQIKVNFTTNIYGTFRQAVVFDFGLGPVLVKHLCVDVIPVTDCGKVKEI
HRELVLSSMERWNVSNSNIVEFSSSIGPVQFQEDKDREQTLLLSYPAPCPSTFSLTHTTI
SEKKLTRNNYRARIHELLFVEELARYEQVARYNLSAKLQLASCYLLSPSGVAASTAKYSH
NNELFALLQLGTDVSEDTSAGRLILNNCATVYLSPYRDSKLLNNNEKRTVHEALIEDKGK
NVIYLRLSAHTVTNLGLKADTSIKFDVQFQLNRIPYCEWHYAIDHIADFKIIFPDTFLEP
IIPWSPKRQWVDIIDKKLNVKQREAVIAITTPINVNLPPILIIGPFGTGKTYTLAQAIKQ
TLLQDNTRILVCTHSNSAADLYIKDYLHPYVEEGHTEAKPLRIYYHKRWVSTVHSTVQKY
CILDQNGSFRLPNLKEILDYRVIVVTLSISMFLSSVGLEKGHFTHILLDEAAQAMECEAI
MPLALANTDTRIVLAGDHMQLSPEIFSKFAKERNLHVSLLERLYDHYPGLFACKILLCEN
YRAHEAIIHFTSELFYEQKLVSKGNQPQHDTLYPLTFFTTRGEDIQDSNSTAFYNNAEVY
EVVERVSELRKNWPTAWGSFDEHSIGIMTPYSDQVFRIRSELRKRRMGGISVERVLNVQG
KQFRAIFLSTVRTRRTCVSNNISGGEKASNGLNKLGMDDMDYGFLSNSKLLNTAITRAQS
LVAVVGDPVALCSIGRCRKVWERFIQICEENNSLNGITWMHLRNLLDNLELKKTYVLNPL
APEFIPRRYQQESYIKIPQSLATFNAAIPPPPLQFTQPPPLYSSPIFPFPVYIPSITQPP
PPPPPTFISLRQPIINPNQIWPVGPLANSQNLFQRPLLQQQGQKSTDEEIRPPPGIVSSR
NPSGLVHLVQNGHTDLQFVQNSGVTPVNLPSPNMMSNIVSNSNLIGLQDQFNKINVSTSS
QPFPIQHPSVIQPFNVRTVLNVNNQHAEGITVQQQQQLQTQTQRNSDRSILESMLPHNIS
IEEMANSQTKQLEWLKFLTDNGGALMGQTFIELLRSQTLYKKPVIQQQSNVPLQMNIPPP
EINNRVPEDILNIFIQQQQQQQQQHQLQQQQQQQQQHLQQQTQKQQININGFGNQNLMNQ
SLDGNGTSDDVYKSLANQFAFNQLQLVGIDQIDRTPLYKRQAQQQPNGNVILPFNGDQQP
ISPQYQESLLSYTDACRQSPMADEQNKISIDGQYNNDASSNNGLYNFFN
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaatttttcggaggttgaacacagagctatagaatacttaaatcataaacaa
tggagcaatgcgttcctctgtttcgatcaactattacaaaatgctattgcgaaaagcctt
ccatccgaacgtcttattggttacctactaggacgttctcagtgcagtttggaattaaaa
aagtttgaagatgttgtatatgattcccggcatattatatcaatgttaaccaatgaagat
aatgcttatagttctcgtgttcggcgtaacttagtaaatgcgctatactctctaaaaaga
tattctgaagcagaacaggcagctttagaatggataatacgatcagaaaacaatagtgaa
gctaagaaaatgttagaaacggttcgattagtgtggagcatgtctaaagataatataaca
acctcagtacaaccattagaagatcaattaaatcaaattaatgaagacttattatttggt
gatagactagattcctggattgcaaccggtgttggggagcaaagtagaaggaatagaaaa
catccagttgaactagtggatgatgagaaattgattggtcaaaccatgaacaatgaaagt
ataggagtacataattttgatagtaacactcgactttatgacagatacaatggtgctgat
catgcaattggtataatatgtcccagtgtttttaaccataatggtgatacttatgatttt
tctacttataatacaaaatctacaaaagtattcgaagaatcaaaaaagccaacagattta
aaatttccaaaaaaaacagatatgagatattcttgtacatattgtgggatatcatttcat
ttagataatcaattgagagctcactgtgcaactgaaagtcatcaaacagtaatcatgtca
gatgaaggtcgagactggaaatggagacctccacctcgaggtttttcatctgaatgttac
actttgtgcgaagcatttgctgaaagtgaaggtgcagaaggctcgtgcaaatatggtgct
cagtgtgtagaagctcatggcttagaagagttagctgaatggaaagaaagatttgagtat
agaaaaatgaaattacaacgtgctagtgaaaataaattatatggaaaatcatataccgaa
caattattagaaagatgggtgcaatcaacaaatccagaaaaaattatgagagaaagtttg
gattgtgttgttgaaacacatgattgtgatctagtcaccacagttgaatcaaaaacaagt
agtcgtaagtggacatttgttttagaaactatatcaccacttcaagctgtagcattacta
caagacacatatcgtaaccatttttcactaaaacatattttggttgataatggattgcaa
caaatagcctttgacatggagcctccaaatgatcaagaatgggtctcacaggcccaacac
cctgtctcacaatcaatgtcttccaaacttagacatcaaatcaaagtcaactttacaaca
aatatttatggtacctttaggcaggctgttgtatttgattttggtcttgggcctgtttta
gtgaagcatctttgtgttgatgtaattcctgtaacagactgtggcaaagtaaaagaaatt
caccgagagttagtgttatcatcaatggaacgttggaatgtatctaattcaaatattgtg
gaattcagttcttcaattggtcctgtacaatttcaagaagacaaagatagagaacaaaca
ttgttattaagttacccagcaccttgtccatccaccttttctctaacacataccactatt
tcagaaaaaaaacttactaggaataattatagagcccgaatacatgaattattatttgtt
gaagaattagctcgctatgaacaggtggcaaggtataatttatctgcaaaattacagcta
gctagttgttatcttctatctcctagtggtgttgcagctagcactgctaaatattctcat
aataatgaactttttgctttgttacaacttggaactgatgtgtctgaagacacatctgct
ggtcgattaattttaaataactgtgctacagtatatttatcaccatatagagattctaaa
ttattaaataacaatgaaaagcgtactgttcatgaagctctgattgaagataaaggaaaa
aatgttatatatcttagattatcagctcacacagttactaatcttggtcttaaagctgac
acaagtataaaatttgatgtacaatttcagctcaatagaataccttattgtgaatggcat
tatgcaattgatcatattgctgattttaaaataatattccctgacacttttttggaacct
atcattccatggagtcctaaacgtcaatgggtagatattattgataaaaaattaaatgta
aaacaaagagaagctgttattgctatcacgactccaataaatgttaatttacccccaata
ttaataattggtccatttggtacaggaaaaacatatactttagctcaagcaattaagcaa
acactattacaagataacactagaattttggtgtgcacacattcaaatagtgctgcagat
ttatatataaaagattatttgcatccatatgttgaagaaggacatacagaagctaagcct
ctaagaatatattatcacaagcgatgggtatctacagttcacagtacagttcaaaagtac
tgtattttggatcaaaatggatcatttagactaccaaatcttaaggaaattttagattat
cgtgtgatagtagttacgttaagtatttcaatgtttctgtcatctgttggtttggaaaaa
ggacactttactcatatacttctggatgaagctgcacaagcaatggaatgtgaagcaata
atgccattagctttggctaacacagatacacgtattgttttagcaggtgatcacatgcag
ctaagtccagaaatattttcaaagtttgctaaagaacgtaatttgcatgtatctctcttg
gagagattatatgaccattatcctggattatttgcttgtaaaatactactttgtgaaaat
tacagggcacatgaagctataatacattttacatcagagctattttatgaacaaaaatta
gtaagtaaaggtaaccagcctcaacatgacactttataccctttgacttttttcaccact
cgtggggaagacatccaagatagtaattcaactgcgttttataataatgctgaagtgtat
gaagttgttgaacgtgtatctgaacttagaaaaaattggcccacagcgtggggatcattt
gatgaacattccattggtataatgactccatattcagatcaagtatttaggataagatca
gaattacgcaaacgacgtatgggtggtatttctgttgaaagagttttaaatgttcagggt
aaacaatttagagcgatatttcttagtactgtgcgcacaagaagaacatgtgtgtcaaat
aatattagtggtggtgaaaaagcaagcaatggtttaaacaaactaggaatggatgatatg
gactatggatttctatcaaattcaaaattgcttaacactgctataactcgagcacaaagt
cttgtagctgttgttggtgatcctgtagctctttgttccattgggcggtgtagaaaagtt
tgggaacggttcattcaaatatgtgaagaaaataatagccttaatggtattacctggatg
catttacgaaatctacttgataaccttgaattaaaaaagacttatgttctgaacccattg
gcaccagagtttataccaaggcgttatcaacaagagtcttacattaaaattccacaatcc
ttagcaacatttaatgcagctatccctcctccacccttgcaatttactcaaccaccacct
ttatactcttcaccaatatttccatttccagtttatataccatctattacccaacctcct
cctccacctcctcctacatttatatctttgcgccaaccaatcattaatcccaatcaaata
tggcctgttgggccattagcaaactctcaaaacctatttcaaagaccactgttacaacaa
caaggacaaaaatcaactgatgaagaaatacgccctccaccgggtattgtatcttcaaga
aatccatcgggattggtccatttagttcaaaatggtcatactgatcttcagtttgtccaa
aattcaggagttacacccgtaaaccttccttctcctaatatgatgtctaatatagtatca
aatagtaatttaattggacttcaagatcaatttaataaaattaatgtgtctacatcatca
caaccttttccaatacaacatccatctgttattcaaccatttaatgttagaacagtttta
aatgttaacaatcaacatgctgaaggtattacagtgcaacagcaacagcaacttcagaca
caaactcaacgtaatagtgatcgatctatacttgaaagtatgttaccacataatataagc
attgaagaaatggccaactcccaaacaaaacaattagaatggctaaaatttttaacagat
aatggtggagctttaatgggacaaacatttattgaactattgcgatcacaaacattatat
aaaaaacctgttattcaacaacagtctaatgtacctcttcaaatgaatattccaccacca
gaaataaataatagagttcccgaagatatattaaatatttttattcaacagcagcagcag
cagcaacaacagcatcaacttcaacaacaacaacaacaacaacagcaacatcttcagcaa
caaacacagaaacaacaaataaatattaacggatttggaaaccaaaatttaatgaatcaa
tcacttgatgggaatggaacatctgatgatgtttacaaatcattagcaaatcaatttgct
tttaatcaactacaattagtcggtattgatcagatcgatcgtacaccattgtataaacga
caggctcagcaacaaccaaatggcaatgtcatcttgcctttcaatggtgatcaacagcca
atatcaccacaatatcaggagagcttgttatcttatacagatgcttgtagacaatctccc
atggctgatgaacaaaataagatttctattgacggtcaatataataatgatgcatcaagt
aacaatggactttataacttctttaactaa
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integrated database retrieval system
