Diabrotica virgifera virgifera (western corn rootworm): 114326360
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Entry
114326360 CDS
T09922
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv04382
Cornified envelope formation
dvv04512
ECM-receptor interaction
dvv04518
Integrin signaling
dvv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114326360
04518 Integrin signaling
114326360
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114326360
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
114326360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dvv04147
]
114326360
00536 Glycosaminoglycan binding proteins [BR:
dvv00536
]
114326360
Exosome [BR:
dvv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114326360
Glycosaminoglycan binding proteins [BR:
dvv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114326360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
114326360
NCBI-ProteinID:
XP_050510500
LinkDB
All DBs
Position
1:12043553..12284538
Genome browser
AA seq
2027 aa
AA seq
DB search
MELVAMTLRPGLCRATALLVLLLVTIVNANRKCGGCSNPYKDWKCDCSGIKGTPGLEGIH
GAPARSGDYGDPGYPGPPGPKGEKGSDGEYGIFGDKGPRGDEGPPGLQGISGRPGEQGEV
GVRGSPGLDGFDGADGAPGVSGRSGRPGQRGSPGPDGAQGLSGEAGDGGGNSIGVKGEMG
IAGVDGFQGINGFQGPRGSMGYRGSPGFPGLTGEAGPKGVQGDAGDTRYGGPGQRGSDGD
QGPKGEKGEGFAKGDWNQEPIRYHLKGEPGEKGQKGEMGEWGVKGRMGDHGQPGIPGRKG
ETGFKGDPGEDGPFGKQGRPGPLGPPGEKGDKGAPGYEGDYGRDGSKGWPGEPGRQGFPG
EQGKEGPPGIYDPTYDEPAKIGSPGRQGPEGYPGDIGMSGIPGRQGSPGPLGEPGKPGPP
GRPGLPGLKGLSIKGERGPDGLQGRPGNTGPPGEPGLVGPFGEKGFKGETVYGPTGAAGI
PGLPGYDGPPGERGSTGDRGLKGYPGVGPPIQGPPGEPGARGSPGFSGDPGYQGMNGFPG
LKGRRGDDCGVCRPGLPGQKGDKGDGGRFGRPGFTGYQGLPGPRGPKGLDGLPGPAGKEG
LDGSPGSDGLEGVPGPPGNPGILIYPAGNLIKADEAEIGDAGYPGITGPEGPPGPKGPFG
EEGFIGFKGERGDVGESGNPGRDGLAGLNGLPGEKGEPTSATKEELRGFTGLKGVAGRKG
EPGRPGARGIEGTIAGSLQRNRGDRGIVGDFGEPGYEGRPGEKGFMGSPGWPGLPGPAGE
QGVSYVGPQGLKGYPGIAGDHGFSGSPGEPGNRGLDGIPGLEGPKGDRGDNGRPILYGDM
GYPGPKGIKGLAGDFGPAGRSGLSGIPGPKGERGPKGAPGYYGSPGLPGLKGQRGSVIPG
APGRMGAPGQPGAKGQYGDIGESGEDGNPGQDGLYGAKGEPGFMGPRGSPGDAGPVGYPG
HRGANGFPGSPGAQGNRGDLGLRGPAGPSGPKGLVGPFGSKGERGNVGPAGGVGFSGQKG
LPGPIGDIGVPGWSGEKGESAVSGQQGDQGEPGIPGQRGYPGRDGLPGIRGQPGEPGIDV
VGYAGSKGERGQTGPNGYNGRPGIKGKQGDHGGVGYSGARGDKGSSGLAGRSGLVGLAGF
KGERGDVGFSGVNGTKGERGMDGFNGRAGRPGAPGDMGYPGMIGMPGVRGQKGNRGPAGR
QAFGIAEKGDIGDYGMTGIQGLKGIQGDIGYPGPTGSRGEVGAIGLPGLSGEPGYPGLPG
DRGDIGFEGAPGIPGQNAEPGERGRPGFDGSPGRPGFPGQKGAPGKFGPDGQMGRAGLPG
LSLNGVKGERGDFGLMGFPGLPGSEGRPGVIGKRGRPGAPGVRGEPGYSAYSAKGEQGDV
GFRGAPGFNGTKGERGTAGLDGLSGPTGPSGLKGMMGMFGFEGQNGFPGLRGQKGEPGDY
AIDAQPGELGDIGLPGMDGSRGLQGLPGRGGAPGIRGAMGDRGDTGLAGLPGLNGPKGMR
GMPGFNGRVGVKGYRGAKGERGEPAPQYLGPQSRGFHFTRHSQSEIVPVCPKNTVKMWDG
YSLLHIMGNERSHGQDLGAPGSCLRKFNTMPFLFCNINDVCDYAQSNEYSYWLSTTEPVP
MTMTPIAAQNVQRYISRCSVCEAPTRVVAVHSQATEIPQCPQGWEELWVGYSFLMHTDAG
AEGSGQSLVSPGSCLEEFRPKPFLECHGHGTCNYYTTAVSYWLATIENYSMFRKPRPETL
KAGSLTQKISRCSVCIKRRIDSRRPNQPVPEVPSEINQPYRSPGNRPTYQPSYPSSSGSS
SGSYTGSQYRSSSGSQYGGSGSQYGGSSGSQYGGSSGSQYGGSSGSQYGGSGSQYGGSSG
SQYGGSSGSQYGGSGSQYGGSSGSQYGGSSGSQYGGSSGSQYGGSSGSQSSPGSPYGTSS
ASSPYGPSYGSSSAGSSSSSGRQYPPYYQPGTGRSAAENSTSTSQRRAHRPVGYRPQNPP
PGFISPTGTANPNLRNLNNPPRTRVRNGTQYRRRRPNYARLQNSSTQ
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atggagctagttgccatgacgctgcggcctggcttgtgccgggcgacagccctactagtt
cttttgctcgtgacgatagtgaacgcgaatagaaagtgtggaggttgttcgaatccctac
aaagattggaaatgcgattgttcggggataaaaggaactcctgggctcgaaggtattcac
ggagctcctgctagatctggagattatggtgatccaggttatccgggaccaccaggacca
aaaggagaaaaaggatctgatggagaatacggaatttttggagataaaggacctagggga
gacgaaggacctccaggactacaaggaatatcaggccgaccaggagaacaaggagaagtt
ggtgttagaggttcaccgggtctagacggtttcgatggagcagatggagcacctggtgta
tcaggtagatcaggacgaccaggtcaacgcggttctccaggtcccgatggtgcccaagga
ttatccggagaagcaggagacggaggaggaaattccattggggtgaaaggagaaatgggt
atagctggagtagatggctttcaaggtattaacggttttcaaggtcccagaggatctatg
ggttaccgcggttcaccaggttttccaggacttacgggtgaggcgggacctaaaggagtg
cagggagacgcaggagacaccagatatggtgggccgggtcaacgtggtagtgatggagac
caagggccaaaaggagaaaagggtgaagggtttgccaaaggagattggaatcaggaaccg
attcgttaccatttgaagggagaaccaggagaaaagggtcagaagggtgaaatgggagaa
tggggagtcaaaggtcgcatgggagatcatggtcaacctggtatacccggacgtaaagga
gaaactggtttcaaaggagatcctggtgaagatggaccatttggaaagcagggccgtcca
ggtcctctcggaccaccgggtgaaaaaggagataaaggagcacctggatacgagggagac
tatggccgagatggatctaaaggatggcctggagaaccaggacgacaaggttttccaggt
gaacaaggtaaagagggaccaccaggtatatatgatcctacttatgacgaaccagcaaaa
attggaagcccaggtaggcaaggacctgaaggatatcctggggatataggtatgtctgga
attcccggacgacaaggaagtccaggaccgttaggggaaccaggaaagccaggaccacca
ggaagacccggtttacccgggcttaagggattaagtattaaaggagaacgaggtccagat
gggctacaaggacgaccaggcaacacaggccctcctggagaaccgggtttagtaggacca
tttggagaaaaaggttttaaaggagaaacagtatatggacctacaggagctgcgggtatt
ccaggtctcccaggatacgacggaccaccgggagaaagaggaagtactggagaccgagga
ttaaaaggatatcccggagttggcccaccaattcaaggacccccaggtgaaccaggcgca
cgtggatctcctggattttccggtgacccgggttatcagggtatgaacggattccctgga
ttaaaaggaaggcgtggtgacgattgtggagtatgtagaccaggactgccaggacaaaaa
ggagataagggtgatggtggtcgattcggtcgacctggattcacgggataccagggatta
ccaggtccccgtggacctaaaggactagatggcctaccgggtcccgcaggaaaggaagga
ttagatggatcaccaggatcggatggtctggaaggtgttccaggtccaccaggtaacccg
ggtatactcatatatcctgcaggcaatctcataaaagcagatgaagctgaaatcggagat
gctggttacccaggaattacaggaccagaaggacctcctggtccaaaaggtccatttggc
gaagagggattcattggttttaaaggagaacggggagatgttggtgaaagtggaaatcct
ggtagagatggattggctggattaaatggtttgccgggagagaaaggggaaccgacttct
gcaaccaaggaagagctgaggggatttaccggactgaaaggtgtagcaggtagaaaaggt
gaacctggtaggccaggggcgagaggtattgaaggtacaatagctggaagtctccagagg
aatagaggtgacagaggaattgtaggagattttggagagccaggatatgagggtaggcca
ggagaaaaaggctttatgggttctccgggttggccaggtcttccaggtccagcaggagaa
caaggtgtatcgtacgtagggcctcaaggtttgaaaggatatccaggaattgcgggagat
catggtttttctggaagtcctggtgaaccaggtaatagaggacttgatggtataccaggt
ttagaaggacctaagggagatagaggtgataacggacggccaattttatatggagatatg
ggataccctggacctaaaggcataaaaggtttagcaggcgactttggaccagctggacga
tctggtctatctggtatacctggacctaaaggagaaagaggtcccaaaggagctccggga
tattatggatcacctggtttgcctggacttaaaggtcaaagaggatccgtaattcctggt
gcgccaggtagaatgggagctccaggacaacctggagccaaaggtcaatacggagatatt
ggagagtcaggagaagatggaaatcctggacaagacggattatatggagccaaaggagaa
ccaggtttcatgggaccaaggggatctcccggagacgcaggtccagtcggataccctgga
cacaggggagcaaatggttttcccggttcaccaggtgcacaaggaaatcgaggtgatttg
ggtctcagaggtccagcgggtccttcaggtccgaaaggattagtcggtcctttcggttca
aaaggggagcgtggtaatgtaggaccagcaggtggagtaggtttttcaggacaaaaaggt
ttaccaggaccaattggagatattggtgtacctggatggtcaggagagaagggagaatct
gcggttagtggacaacagggagatcaaggagaacctggcatacctggacaacgaggttac
cctggaagggatggtttgccaggcatacgtgggcaacctggagagccgggtatcgatgta
gtaggatatgctggatctaaaggcgaacgaggtcaaacaggaccaaacggttataatggt
aggccaggaattaaaggaaaacaaggtgatcatggaggtgtaggctactcaggtgcaaga
ggtgacaagggatccagtggtctcgcaggaagatcgggactcgttggattagctggcttc
aaaggagagcgtggtgacgtgggtttttctggagttaacggtactaagggagaaagaggt
atggacgggtttaacggacgtgcaggaagacctggtgcaccaggagatatgggttatcca
ggaatgataggaatgcctggtgtcagaggtcaaaaaggtaacagaggtccagccggtcgt
caagcttttggtattgcagaaaaaggagatattggtgactatggcatgactggaattcag
ggtctaaaaggtattcaaggagatataggatatccagggccaacaggttcaagaggtgaa
gttggtgcgattggtttaccaggcttatcaggagaaccaggttatcccggtctcccaggc
gatagaggagacattggttttgaaggtgcgccaggtatacctggacaaaacgcagaacca
ggggaaagagggcggcctggattcgatggtagtcccggacgtcccggttttcctggacaa
aaaggtgctcctggaaaattcggacctgatggacaaatgggacgagctggtttaccggga
ttatcattaaatggtgtcaaaggagaaagaggagattttggtttgatgggattcccagga
ttacctggatccgaaggaagacccggtgtcataggaaaaagaggtcgacctggagcacct
ggagttagaggtgaacctggctattctgcttatagtgctaagggagaacaaggtgatgtt
ggatttagaggtgcgccaggattcaacggaacgaaaggagagcgcggtactgctggactc
gatggtttatctggacctacaggtccttctggacttaaaggaatgatgggcatgtttgga
ttcgaaggccagaacggatttcccggattaagaggacaaaagggagaaccaggtgactat
gctattgatgcacaaccaggtgaactgggtgacattggtttaccaggaatggacggttct
agaggattacaaggattaccaggccggggtggggcaccaggaatacgtggtgcgatgggt
gatagaggtgacactggtcttgctggtcttcctggtttaaacggtcctaaaggaatgaga
ggaatgccaggtttcaatggtcgtgtcggtgttaaaggttacagaggtgctaagggagaa
cgtggtgaacccgctccacaatatttaggacctcagagcagaggattccacttcacaagg
cattctcaatcagaaatcgtacccgtttgtccaaaaaatactgtcaaaatgtgggacggt
tattcgttattgcatattatggggaacgaaagatctcatggccaagatttaggggcccca
ggaagttgcctaagaaaattcaataccatgcctttcctgttctgtaacattaacgatgtc
tgcgattatgcccagagcaacgaatacagttactggttgtccaccactgaacctgtacca
atgacgatgacacccattgccgctcaaaatgtccaaagatacatttcaaggtgttctgtt
tgtgaagcgcctaccagagtagttgcagttcatagtcaagctacggaaattcctcagtgt
cctcaaggttgggaagaattgtgggtcggatacagttttctgatgcacacagacgctgga
gcagaaggttcaggccaatctctagtgtccccaggttcatgtctggaagaattcagacct
aaacccttcctcgagtgtcacggccatggaacctgcaactactacacaacagccgtttcg
tattggctcgccacgatcgagaactactcaatgttccgcaaacccagaccggagactctg
aaggctggttcactgacacagaaaatcagtaggtgctcagtttgtattaaacgcaggatc
gactcaagacgacccaaccaacctgtacctgaagtacctagcgaaattaaccaaccttat
aggtcccctggtaacagaccaacatatcaaccatcatatccatcatcatctggatcgtca
tcaggttcatacactggctcacaatacagatcgtcttctggatcacaatatggcggttct
ggatcacaatatggtggttcttctggatcacaatatggtggttcttctggatcacaatat
ggcggttcttctggatcacaatatggcggttctggatcacaatatggcggttcttctgga
tcacaatatggcggttcttctggatcacaatatggcggttctggatcacaatatggcggt
tcttctggatcacaatatggcggttcttctggatcacaatatggcggttcctctggatca
caatatggtggctcttctggatcccaatcatcaccgggatcaccgtacggaacatcttcc
gcaagttccccgtacggaccttcatacggatcttcttcagcgggatcgtcatcaagttca
ggcaggcaataccctccgtactaccaaccgggcaccggtcgttcagctgctgagaattca
acgagtacttcgcaacgtagagcgcatagaccagtcggctacagacctcagaatcctcca
cccggctttataagtcctactggtaccgccaatccaaatcttagaaatctcaacaacccc
cccagaacgagagttcgcaacggtacacagtacagaagaaggaggccaaactatgctaga
ctccaaaattcatcaacacagtga
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integrated database retrieval system
