Diabrotica virgifera virgifera (western corn rootworm): 114332030
Help
Entry
114332030 CDS
T09922
Name
(RefSeq) transient receptor potential-gamma protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
114332030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dvv04040
]
114332030
Ion channels [BR:
dvv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114332030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
Holin_BhlA
Zn_ribbon_Com
Motif
Other DBs
NCBI-GeneID:
114332030
NCBI-ProteinID:
XP_050500315
LinkDB
All DBs
Position
1:complement(128911940..129585636)
Genome browser
AA seq
1198 aa
AA seq
DB search
MFGLFRNKSTAENEEEEEEETEEGMMVSNKKRGSQTCIEIPRTDTTSMCLLEKPPIDKKV
KRHSIHGMMEEENVIRPHQEIAQLTLDEKKFLLAVERGDVASTRRMLQRAEETNYININC
VDPLGRSALLMAIDNENLEMVELLIEHRVETKDALLHAISEEFVEAVEVLLEHEETIHRK
GDPHSWEALPPDTATFTPDITPLILSAHRDNYEIIKILLDRGATLPMPHDVRCGCDECVT
SRQEDSLRHSRSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSFMEHEFKSEYQE
LRKQCQDFATALLDHTRSSYELEVLLNHDPTGPAFEHGDRMHLNRLKLAIKLRQKKFVAH
SNVQQLLASLWYEGLPGFRRKNMVLQALEIVRIGILFPVFSMAYIVAPHSVVGQTMRKPF
IKFICHSASYFLFLFMLILASQRQFLQSFFGVPVPEEVLFTQRGAKPSLVEWIILSYVSG
LIWSEIKQLWDVGLEEYVRDMWNVIDFITNSLYVATVALRIVSIYQVKLYPEASKIRRED
WDAWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMKFFFLYVLVL
FAFSCGLNQLLWYYADSEKLRCPQESGDKHGHNLTETDSNACSIWRRFSNLFETSQTLFW
AVFGLIDLESFELNEIKIFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQLISERADT
EWKFARSKLWISYFEEGGTVPVPFNIIPTPKSVWYVICWIRKKFCGRSRAAKKEHMRTIR
RKVKQANERDFRYQGIMRNLVRRYVTVEQRKAENQGVTEDDVNEIKQDISAFRFELIEIL
KNSGMNTSTAHNVMGTGGKKNRQKERRLMKGFNIAPQPSTTGSLPPVAEFIASLQQHHQG
DTHHHDFFGSTLSGIFTPTPRKLHLHGSTVSSSQGSINEGNGNHHKRLNLKRSQLHKRRW
GTLIEAAKSGKVSRLIGRSRSEDSVCNSCPDNGTTLSHSQSNSPASDDNRSASFSDSNPS
LDVPDRPDKELHGIAQGLALLKKKRKKFSASRNSSPIVPPTTPAEHSHHHRKMPPKKFQQ
VLKRASSVPTRVPDAVQSARHEDTQSQQDSMEIPTTVPSTLTPSTTEESVTTVGPSIPPS
GTSREPLIFNSSSSNPTGSSQTPDEEYNRPSGTHNHISPKLAGIIPLSGHIGPSAGWL
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgtttggactgtttcgaaataaaagcacggcagaaaatgaagaagaagaagaagaggaa
acagaagaaggaatgatggtctccaacaaaaagaggggatcgcagacttgcatcgaaatc
ccacggacagataccacttcgatgtgtcttctagaaaaaccaccaatcgacaaaaaagtc
aaaagacacagtatccatgggatgatggaagaagaaaacgtcattcgaccccatcaagaa
atcgcacaacttactttagatgaaaagaaatttttgctagccgttgaacggggagacgta
gcttcaacaagaagaatgcttcagagagctgaagaaacaaactacatcaacatcaactgc
gttgatcctctcggcagaagtgccttgttgatggccatagacaacgaaaacttggaaatg
gtggaactgttaattgaacatcgcgtggagaccaaagatgcacttctgcatgccatctct
gaggaatttgtagaagctgttgaagttttactcgaacatgaagagactatccatcgaaaa
ggggatccacacagctgggaagcccttcctccagacaccgctacctttactccggatatc
acgcctttgatcctttccgcccatagggacaactacgaaattatcaagatccttttggac
aggggcgctacgctacccatgccgcatgacgttagatgcggctgcgatgagtgcgtcact
tctcggcaagaggactctttgcggcactcaaggagtaggatcaacgcgtatagagcctta
gcttccccgtccctcatagctctatcttccaaagatcctatattgactgcgtttgaattg
tcgtgggagctacgcagactgagttttatggaacacgaatttaaaagtgagtaccaggag
ttgagaaagcagtgccaggattttgcaactgctcttctagatcatacacgaagttcgtat
gaactggaagttcttttgaatcatgatccaactggaccagccttcgaacatggcgataga
atgcacttaaatagactgaagttagctattaaattaagacagaaaaagttcgtcgcccat
tcgaacgtccagcagctcctcgcctcgttatggtatgaaggattgccaggattccgtcgt
aaaaatatggtccttcaggcattagaaattgttcgcatagggattctgtttccggttttc
tcgatggcgtacatcgtcgcgccacattcggttgtcggccagaccatgcggaagccgttc
atcaagttcatatgccactcggcctcatacttcctctttctttttatgttgattctggca
tcacagagacagtttctgcagtcgttttttggtgttcctgttccagaagaagtattattc
acacaacgtggtgctaaaccgtccttagtagaatggattattctttcctacgttagtggt
ctgatatggagcgaaataaaacaactttgggatgtaggcctagaggaatacgtcagagat
atgtggaacgtgatagacttcattacgaattcgttatacgtagcaacagtagccttaagg
attgtctctatatatcaggtaaaactgtatccggaggcatcgaaaataaggagggaggat
tgggacgcatgggatccgatgctgatctctgagggattgttttcggcagcaaatatattt
agctctcttaaactggtgtacatattctcggtgaatccacacttaggaccattacaggtt
tctttatctcggatggtaatggatattatgaagttcttcttcctgtatgttttagtgctc
tttgccttttcctgtggtcttaatcagttattgtggtactatgcagattcagagaagcta
agatgtcctcaagaatcgggtgataaacatggccataacctgacagaaactgactccaat
gcttgctccatatggaggaggttttccaatctcttcgaaactagccaaaccctattctgg
gcagtatttggtctaatcgacttggagagcttcgaactcaacgaaataaagatattcacc
aggttttggggaatgttgatgtttggcacctattccgtcattaacattgtcgtcttgctg
aatctactgatagccatgatgaatcattcatatcaactcatatcggaacgagcagacaca
gaatggaaatttgcccgcagcaagctctggatcagctacttcgaagaaggtggtactgtt
cctgttcctttcaacattattccaactcccaaaagcgtttggtatgtcatttgctggatt
agaaaaaagttctgtgggcgatctagggcagcgaaaaaggagcatatgagaactataagg
agaaaagtaaagcaagcaaacgagcgagacttcagataccagggtattatgcgaaatcta
gtacgaagatatgtgacggttgaacaaaggaaggcggaaaaccagggcgtcacggaggac
gatgtcaacgagataaaacaggacatatctgcctttcgtttcgagctcattgaaattctg
aaaaattctggaatgaatacgtcgacggcgcataatgttatgggaactggaggtaagaag
aaccggcagaaggaacgtcgccttatgaagggctttaacatagcccctcaaccttcaacc
actggctctcttcctccggtagccgaattcatagcgtcgcttcaacaacaccaccaaggt
gatacccatcaccacgacttctttggatcaaccttatcaggaatcttcactccaactccg
agaaagttacatcttcacggcagtaccgtttcttcctctcaagggagtatcaatgaaggc
aatggcaatcaccataagaggctaaatttaaaacgaagtcagttgcacaaaagacgctgg
ggcacactgatcgaagcagctaaatctggtaaagtgtctcgacttatcggcaggtcccgt
tctgaagattctgtgtgcaatagttgtccagataatggcacaactctttcgcacagtcaa
agtaatagccctgcgtctgacgacaacaggtccgctagcttttcggattcgaatccaagt
ttggacgttccggatcggcctgacaaagagttacacgggatcgcacagggtttggcgtta
ctaaagaagaagagaaagaaattctcggcttcacgaaattcgagtccaatagtgcctcca
accactcctgctgaacatagccaccaccatcgaaaaatgccaccgaagaagttccaacag
gtcttgaaacgtgcctccagcgtccctacaagagttccagatgccgttcaatcggcgcgt
catgaagacacccaatcgcagcaagactccatggagatcccaaccacggtaccgtccacc
ttaaccccatcaaccactgaggaaagcgtgaccacagtgggtccttctatcccacccagc
ggaacttcacgagaaccgttgatcttcaattcttcctccagtaatcccacagggtcttca
caaactccggacgaagagtacaacagaccttccggaactcataatcatattagtccaaag
ttggctggaatcatacctttaagtggacatatcggaccatcggctgggtggttgtag
DBGET
integrated database retrieval system
