Desulfosarcina widdelii: DSCW_43500
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Entry
DSCW_43500 CDS
T06303
Symbol
Ada
Name
(GenBank) DNA methylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSCW_43500 (Ada)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dwd03000
]
DSCW_43500 (Ada)
03400 DNA repair and recombination proteins [BR:
dwd03400
]
DSCW_43500 (Ada)
Enzymes [BR:
dwd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DSCW_43500 (Ada)
Transcription factors [BR:
dwd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DSCW_43500 (Ada)
DNA repair and recombination proteins [BR:
dwd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSCW_43500 (Ada)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_17
Motif
Other DBs
NCBI-ProteinID:
BBO76933
UniProt:
A0A5K7ZAV8
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Position
complement(4680555..4682024)
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AA seq
489 aa
AA seq
DB search
MMHLDRDVCDRARLARDPRFDGLFFIGVKSTGIYCRPICPARPPRPENIVYFPTAAAAAA
AGMRPCLRCRPETAPGTPAWNGTSASVSRAMHLIRQGALNDGSVDQLADRLGLSSRHLRR
LFRKHIGATPNVIAGHQRLLFAKKLVMETDMPITQVALASGYGSLRRFNAAFRKGVGRTP
SRMRSSRSQTRPVAASGVRCILDLSYRPPYDWDRMLAFFQRRAIPGVEHVSDGTYRRTVR
LGSGRGEIAVRHAAKGFGLTLEVCLTDDRDLMFTVERVKRMFDLDANPQAIHSTLCHDPL
LGRLIRQTPGLRLPGSWDPFETAVRAVIGQQISIKGAVTQMGRLVRQAGKAYDTVEDVRL
THFFPEAAELADMDWTAIGMPGARRKTLRLLAEKVDSGALSLEGTAGLPAFIDAMTQIYG
IGEWTANYIAMRALDEPDAFPASDLGILKALQEGPDRPTGKQASARAENWRPWRAYACMY
LWHSLEEAG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacttggaccgggatgtttgcgaccgggccagattggcccgcgacccccgtttt
gacggcctttttttcatcggcgtcaagagcacgggcatctattgccggcccatctgcccc
gcccgccctccccggccggaaaacatcgtctattttcccaccgctgccgcagcggctgcg
gcaggaatgcgcccctgcctgcgctgccggccggagacggcaccgggcacaccggcctgg
aacggaacctcggcctcggtttccagggccatgcacctgattcgacagggcgccctgaac
gacggttccgtcgatcaattggccgaccgtctcggcctaagctcccggcacctgcgccgc
ctgtttcgcaagcatatcggggccacccccaatgtcattgccggccaccagcggcttctg
tttgcaaaaaaactggtgatggaaacggacatgcccatcacacaggtcgcactggcctcc
ggctatggcagcctgcggcgcttcaacgctgcatttcgcaaaggcgtcgggcgaacgccg
tctcggatgcgaagcagccgctcgcaaaccagaccggttgcagcttccggggtccgctgc
attctcgatttgtcctaccggccgccctacgattgggatcggatgctggccttcttccaa
agacgcgccatccccggagtggaacacgtgtcggacggcacctatcggagaacggtgcgt
ctgggttcgggccggggcgaaatcgctgtaaggcatgctgccaaagggtttggattgacg
ctcgaggtttgcctcacggatgatcgggacctgatgttcactgtcgaacgcgtaaagcgc
atgttcgacctggacgccaacccccaggccattcattcgaccctgtgccatgatccgctt
ctggggcgtctgatccgtcaaacgccagggctgcgactgcctggttcgtgggatccgttc
gaaaccgcggtgcgggccgtgatcggccaacagatttcgatcaagggcgccgtcacccaa
atgggccgccttgttcgtcaggcaggcaaagcatacgatacggttgaagacgttcgtttg
acccacttttttccggaagccgccgagttggcggacatggactggacagccatcggaatg
cccggggcgcgcaggaaaaccctgcgactgctggccgaaaaggtggattcgggagcactg
tccttggaagggaccgccggcttgccggccttcattgatgccatgacacagatatacggc
atcggtgagtggacggcaaactacatcgccatgcgcgccctggatgaacccgatgccttc
ccggcgtccgacctgggtattttaaaggcccttcaggagggtcccgacagacccacgggc
aagcaggcaagtgcacgggccgaaaactggcgaccgtggcgagcatacgcctgcatgtat
ctatggcattctctggaggaggcaggatga
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