Drosophila willistoni: 6640589
Help
Entry
6640589 CDS
T01067
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X2
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dwi
Drosophila willistoni
Pathway
dwi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dwi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6640589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dwi03019
]
6640589
Messenger RNA biogenesis [BR:
dwi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6640589
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
6640589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_1st
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
DUF4327
Motif
Other DBs
NCBI-GeneID:
6640589
NCBI-ProteinID:
XP_002063248
UniProt:
B4MQ45
LinkDB
All DBs
Position
2L
Genome browser
AA seq
2598 aa
AA seq
DB search
MRQEAIPLIHIRSLVKYVNKRNFNETNESIKQFIQDFGLEADRSVLRHLFTVLNFSDPKP
NSTSQWQAKLLGAILERQLQSSSFVSSICFAVDQHFAANQKTVKPTELIGQVSRLTGINK
LCECIFALAVTHSSYPELQQSARDNLRSSLPELLDSYLGNNNRSASAAASGLQDISSDLL
QYLLSCLNEFVTPQLEGQFLNKLREEFPRQTVPLILAPFLYGTTKTTATQSIVGSVQASP
GETDAETETGPGIETTTASSSTTSNNNTTVTTDADTLNEVGIEDIYDHLCEIIFSSQGKN
NIMDTSWMNLILEIGYDFTSSVEECKNHISSGSTTRERGADLQPKDVAKIVGLMCRRHSS
LLDCNVNLPTPGNFWPGQGQGGSNAGNSASGAASSQNQTQQQQNAGGSSSSNSSNNNEGG
ATDGLSTGSSDKSAKDKKETTDATQTWKPDVFVQALKELVPQLNWKDVCMELDHPEFILK
DRIGLDLLLTIFRLATQSPVFPHPECIYRYWANIEGQLSLITTILKNPDLFSFADYVFSQ
PSLDVLKTAPDADNKEIAAWKSMHLIELLLSIADKGYYTQVHELFKFPAQNCPDVLFLAL
LQISPPLTPLRQDLFNQLIPTFLGNHPNSNVILASAWSSTNFVLRPNIMNAMSEWYLRGG
EFDQVKLSRILDLAQDLKALSSLLNARSFLFIIDLACLASRREYLKLEKWLSDKIREHGE
PFMQAMIKVMQRRCPQVANAKIPEDQLPPKQAQLLPETVTTMINCLQSCINSCMQPEMPE
IIMQMTANMAIMATKARAQQQQQQQQQQQQPGGPQVGLVPPVPPPNILRGHRGMDLPGGI
VPGSGPPPVPPPQQQQPSFSGNLNAQQMFGPGMDPLTNMSNNLSGLNLGGGPNGAFNFNN
MLTSPSRLMNPGASPYPLNPMQMPPAPPPQVGPNLGRMLPSGPPTNPQQQPTPTPPNPNN
PVMGDLQIPVSKEVEDEVNSYFQRIYNHQPNPTLSIDEVLDILQRFKESSSRREQDVFLC
MLRNLFEEYRFFCQYPEKELQITAQLFGGIIDRNLVPTFVALGLSLRCVLDALRKPDGSK
LYYFGVTALDRFKTRLHTYNKYCEHIRSIPHFNDFPPHLIQYVEYGIHGQEPPPQKLIGL
SNTIPSVLASAGAGGAAEPPLYRTNAMPPATIPPGAGGSGAVAIGQKTSLVVSHATRMKS
IANATNIDTLLVANQEEKVTVPPEPVQDKTAFIFNNLSQLNIPQKCDEIKEIMTKEYWPW
LAQYLVLKRASMEFNFHTLYYNFLDALKNGEINRFVTKETLRNIKVLLRSDKGVINFSDR
SLLKNLGHWLGMMTLGRNRPILQLDLDLKSLLAEAYHKGQQELLFVVPFVAKILESSAKS
RIFRSPNPWTMGIMYVLGELHQEPELKLNLKFEIEVLCKTLNLELAKLKPVIYLKDPQRA
LLIEQQMSQPKPKQQQQQIEQQQQPVPVVAPPPVVPPPQQQQQQQPPPPQQQQQAQAPPP
PQQQQQQQVPPPTDVDAQAAAAAAAAMMMSGANNNSGSVASPNLPADPSQVILPPPEPRY
SYVDVNVSNFQLIAQQLVLPPNIPFLHANPGIKHIVVNAMERTITDWLQPVVDRSIRIAC
ATTEQIIRKDFALDADENRMRTAAHQMVRNLAAGMAMITGKDEIARAISQNLHKAFISPL
TGMPSVPEIQAACAQLANENVELVCAFIQKTSAEKSALEIDRRLSTDFETRKIAREEGNR
FVDTQILNYQQERLPEAVRLKVGPAPAPLFAVYSEFARSIPGFQQMSDRDIALFTPKPQD
LPPPNVFANDESSMVYAEVAGKMEAFMNTAINMPTLQLQASKMHMLLNALMATRRLRDHE
SAFNLLTRAVEGLTEGLVNVQDHMEQMKLYRDIHLRILSLLHNSFGAPNTERAVTKCFFD
IREEVRYNVEAARALITSHFVNLNQFDGMLRDCMENGNNYVAISFGIALLERLIMEDRAI
NIVSDNEFMATVELLGRLTQHRHRYPECIVNAIETLWSGNFNNTNDYSPFNASERYLAGA
STYIHSGMHHVRSCDTDDPPGLQEKTEFLLKDWVALYTQQNQQTNRDARNFSAFVQKMNT
YGILKTDDLITRFFRQATHICTDVVYRMFAEPTLPINQAKNKIFQWIDAFVHLIAMLVRH
SGEAGNPTTKINLLNKVLGIVLGTLLKDHEMRGVGFQQVGYHRFFMMLFMELCSADVVME
SLMHSIVSAFAYTYHLLNPSVAPGFCFAWLELISHRVFLGRILVQIPGQKGWPLYAQLLQ
DLFKYLAPFLRNTELGKPVQLLYKGTLRVLLVLLHDFPEFLCDYHFGFCDTIPPNCVQMR
NIILSAFPRNMRLPDPFTPNLKVDMLSDSSNAPKVLSSYIMNIQPPNFKKDLDSYLKARA
PVTFLSELRGHLQVTSEPATRYNMTLMNALVMYVGTQAIALIRNKNFVPNTSNIAHSAHM
DIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCAVLHLFAEANSEAIQEQITRVL
LERLIVNRPHPWGLLITFIELIKNPIYKFWDHDFVHCAPEITKLFESVARSCLAKSGVNQ
QLNMAVVDGENQEVVNIN
NT seq
7797 nt
NT seq
+upstream
nt +downstream
nt
atgagacaggaggcgataccgctaattcacatacgaagtttggtcaaatacgtgaacaag
cgaaattttaatgaaaccaacgaaagtataaagcagttcatacaagatttcggcctcgag
gcggaccgcagcgtactgcgacatctgttcaccgtgctcaactttagtgatccaaaaccg
aatagcacctcccagtggcaggccaaactgcttggagcaattttggagcgtcaattgcag
agctcttcatttgtgtccagtatttgttttgccgttgatcagcattttgccgccaaccaa
aagaccgttaagccaacagagctaattggtcaagtatccagattgactggcattaataaa
ctttgtgagtgcatttttgccttggctgtgacccattcctcgtatccagagttacagcaa
tcggcccgtgataacttacgcagttcgttgccagagctgcttgattcatatttgggcaat
aacaatagatcagcatcggctgcagccagtggtctgcaagatatctcatctgatttattg
caatatttgctaagttgcttaaacgagtttgtcacaccgcaactggagggacaatttcta
aataaactacgtgaagagtttccgcgacagacggtgcccttaatattggccccgtttcta
tacggaacaacgaaaactacggcgacgcagtcgattgtaggatcagtgcaagcatcacca
ggcgaaactgatgcagagacggagactggacctggaattgaaacaacgacggccagtagc
agcacaactagcaacaataataccaccgtcactacagatgcggatactttgaatgaagtt
ggaattgaggatatctatgaccatttatgcgagataatattttcaagccagggtaaaaat
aatattatggacacatcttggatgaatttaatccttgaaatcggttacgactttacatca
agcgttgaagagtgcaagaaccatatttcatcaggcagcactacccgggaacgtggagcc
gacctacagcctaaagatgtggcaaaaattgttggtctcatgtgccggcggcactcatcg
ctgctcgattgtaatgtaaatttaccgacaccaggcaatttttggccaggccaaggacaa
ggaggtagcaatgctggtaacagcgcttctggagcagcatcatcacaaaatcagacacag
cagcaacagaatgccggcggcagcagcagcagcaacagtagcaacaacaatgaaggcgga
gctactgatggcttatccactggttccagtgataagagtgccaaggacaaaaaggagacg
accgatgcaacacagacctggaagccggatgtttttgtccaggcactcaaggagcttgtg
ccccagcttaactggaaagatgtttgcatggaactcgatcatcccgaatttattctgaaa
gatcgtattggccttgatttgctgttaaccatttttcgtttggcaacccaatcgccagtt
tttccacatccagaatgcatttatcgctattgggcaaatattgagggtcaattgtcattg
ataacgacaattttaaagaatcctgatctcttttcctttgccgactatgtgttcagtcag
ccgtcattggatgtattgaaaacggcacccgatgctgacaacaaggagatagcagcatgg
aaatccatgcatttgatcgaactactgctctctattgccgacaagggttattatacacag
gtccatgagcttttcaaattcccagcacagaattgccccgatgtcctattcctggcactc
ctgcaaatcagtcccccgctgacgccgttgcgtcaggatctctttaatcagttgataccc
acctttttgggcaatcatcccaattcaaatgtgatactggccagcgcctggagctctacg
aatttcgtgctgcgtccaaatattatgaatgctatgtccgaatggtatcttaggggcggt
gagtttgatcaggtgaaattatcacgtatccttgatctcgcccaggatttgaaggcgctg
tcgtcgctccttaatgctcgatcctttttgtttataatcgatttggcgtgccttgcgtcg
aggcgagagtatttaaagctagagaaatggctaagcgataagattcgagagcatggcgaa
ccatttatgcaggcaatgatcaaagtaatgcaaaggcgatgcccccaagtggccaatgcg
aaaattccagaagatcagttgccacccaagcaggctcaactcttgcccgaaacagtgacc
acaatgatcaattgcctgcagtcgtgtatcaatagctgcatgcagccggaaatgcccgag
attattatgcaaatgacagccaatatggctataatggcaactaaagcacgtgcccagcaa
cagcagcagcagcagcaacaacaacagcagccaggaggtccacaagtgggtctagtgccg
ccggtgccaccgccaaatatcctacgtggccatcggggtatggatttacccggaggcatt
gtaccaggatctggtccaccaccagtgccgccgccgcagcaacagcagccatcattctca
ggaaatttaaatgctcagcaaatgtttggacccggcatggatccccttacaaatatgtct
aacaatctatctggactcaatttgggcggcggtccaaatggagcgttcaactttaacaac
atgctgacatctccatcaagacttatgaatccaggcgctagtccatatccattgaatcct
atgcaaatgccaccggcaccaccgcctcaagtaggaccaaatttgggaagaatgctcccg
tctggaccaccaacaaatccacaacagcaacccacaccgacgccaccaaatcccaacaat
ccagttatgggtgatctacaaatacctgtctcaaaggaagtggaagatgaggtcaattca
tatttccaacgtatctacaatcatcagccaaatccaacgctttccatcgatgaggtcttg
gacatattgcagcgtttcaaagagtcctccagtcgccgggaacaggatgtgtttctgtgc
atgcttcggaatctgtttgaagagtatcgcttcttttgccagtacccggagaaggaattg
caaatcacagcccaactctttggcggcattatcgatcgcaatctagtgccgacttttgtg
gccttgggtctatcgttacgatgtgttttggatgcattacgcaaacccgatggttctaaa
ctctattattttggagtcacagctctggatcggtttaagacccgtttgcatacgtacaac
aaatattgcgaacatatccgttccataccccacttcaatgactttccgccgcatctgatt
cagtatgtggaatatggtatccatggccaggagcctccaccacagaaattaattggtcta
agcaatactataccatcggtgctagcttctgcaggagcgggaggggctgcagaaccacca
ctttataggaccaatgcaatgcccccggctacaattccaccgggcgctggtggtagtggc
gctgtagcaatcggccaaaagacttcgcttgttgtctcccatgccacacggatgaaatcc
atagccaatgccacaaatatagacacattgctggtggcaaatcaggaggagaaggtgact
gtgccaccggagccagtgcaggataagacagctttcattttcaacaatcttagccaattg
aatataccccagaaatgtgatgagatcaaggagattatgaccaaagagtattggccttgg
ttggctcaatatctggtgctgaagcgtgcttccatggagtttaatttccatacgctttac
tacaactttctggatgctctgaaaaacggtgaaatcaatcgatttgtgaccaaggagaca
ttgcgcaatattaaagtcttgctacgctcggacaagggtgtcatcaatttctcagatcgc
agtttgctcaagaatctgggccattggttgggcatgatgacattgggacggaatcgaccc
attttgcaattggatttggatttgaaatccctgcttgccgaggcctatcataagggacag
caagagttactctttgtggtgccatttgtggcaaagattctcgaatcatcggcaaaatcg
agaatcttccgttcacccaatccctggaccatgggcattatgtatgttcttggtgaattg
catcaggagccagagttaaaattgaatttgaaatttgaaattgaagttttgtgcaagaca
ctcaatctggagctggccaagctaaagccagtgatctacctgaaggatccccaacgagct
ttgcttattgagcagcaaatgtcgcagccaaagcccaaacaacaacaacagcagatagaa
caacagcagcagccagtgcccgtagtagcaccaccgccagtggtaccaccaccacagcag
caacaacagcagcagccaccaccacctcaacagcaacaacaagcacaagcaccgcctcca
cctcaacagcagcagcagcagcaagtaccaccgcccaccgatgtggacgcacaggcagca
gcagctgccgccgcagccatgatgatgagtggagcaaataataattcgggttcagtggct
tcacccaatcttccagcagatcccagtcaagtgattttgccgccacccgagccgcgttac
tcttatgttgatgtgaatgtgagcaatttccaattgattgcccagcagttggtcctacca
cccaatataccatttctgcacgccaatcccggcatcaaacacattgtggtcaatgccatg
gagcgcacaattaccgattggcttcagccggtggtagatcgcagcataaggattgcctgt
gccaccaccgaacagattatacgcaaagatttcgctctcgatgcggatgagaatcgcatg
cggaccgctgctcaccagatggtacgtaatctagctgccggcatggccatgataacgggc
aaagatgagattgctcgggccataagtcaaaatttgcacaaggccttcatttcaccattg
actggaatgccaagtgtgccagaaattcaggccgcctgtgctcagctagccaatgaaaat
gttgaattggtctgcgccttcattcaaaagacatccgctgagaagtcagcccttgagatt
gatcgacgtctatccacagactttgagacacgcaaaattgcccgcgaagaaggcaatcgg
tttgtggatacgcaaattctaaactaccagcaggagcgcctgcccgaggcagtgcgtcta
aaggtgggccccgccccggctcccctgtttgcggtctattcggaatttgcccgcagcatt
ccgggatttcaacagatgagtgatagggatattgctctgttcacacccaagccgcaggat
ctgccaccaccgaatgtgtttgccaatgatgagagcagcatggtctatgccgaggtggct
ggtaaaatggaagccttcatgaacacagccatcaatatgcccactcttcagttgcaggca
agcaagatgcatatgctccttaatgccctgatggccactcgtcgtttgcgtgaccatgag
tccgctttcaatctcctgacccgagcagtggagggccttaccgagggtttggtcaatgtg
caagatcacatggagcagatgaagctctatcgggacatacacttgagaattctcagcttg
ttgcacaacagcttcggtgcccccaacactgagcgggccgtcacaaagtgtttctttgat
atacgcgaagaagttcgttacaacgtggaagcggctcgtgccctgatcacttcacatttt
gtgaatcttaatcaattcgatggcatgctgcgagattgcatggagaatggcaataattat
gtggccatatcgtttggcattgctctgctagagcgcttgattatggaagatcgggccatt
aatattgtttccgataatgaattcatggcaactgtcgaattgttgggcagattgactcag
catcggcatcgttatcccgagtgtatagtgaatgccatcgagacactgtggtcgggcaat
ttcaataataccaacgactacagtccattcaacgccagcgaacgttacttggctggagcc
tccacttacatacactctggcatgcatcatgtaaggtcatgcgacacagatgatccacct
ggtttgcaagagaagaccgaatttctactcaaggattgggtagctctttatacacaacag
aatcaacagaccaatcgagatgctcgcaatttcagcgcctttgtccaaaagatgaacacc
tatggcatactgaagacagacgatctgattacacgattcttccgtcaggccacacacatt
tgcacggatgttgtgtatcgcatgtttgccgagccaacacttcccattaatcaggccaag
aacaagatattccaatggatcgatgcatttgtccatttaattgccatgctggtgcgtcac
tctggcgaagctggcaatccgacaacaaaaatcaacttgctcaataaggtattgggcatt
gtattgggcacactgctcaaggatcacgagatgcgtggcgttggtttccagcaggttggc
tatcatcgattcttcatgatgctctttatggaattatgttcggctgatgtcgttatggag
tccctgatgcatagcattgtgtcggcctttgcctatacctatcacctgctgaatccaagt
gtggctcctggtttttgctttgcctggctggagctcatttcccatcgtgtcttcctggga
cggattctcgtccaaatacccggacaaaaaggttggccattgtatgcccaattgctgcag
gatctcttcaagtatttggccccattcctgcgtaataccgaattgggcaaacccgttcaa
ttgctctacaaaggaacgctgcgcgttcttcttgttttgctccatgatttccctgaattc
ctgtgtgattatcactttggcttctgtgacaccattccacccaattgtgtccaaatgcgc
aatattatattgtcggcctttccacggaatatgcgactacccgatcctttcacacccaat
cttaaggtggacatgctctcggacagcagcaatgctcccaaggtccttagtagctacatt
atgaacattcagccacccaactttaagaaggatctggattcatatctaaaggccagagcg
ccggtcaccttcctatcggaattgcgtggtcatctgcaggtcacaagtgaaccagcaacg
cgctacaacatgaccctaatgaatgctctcgtcatgtatgtgggcacacaggccatagct
ctcatcagaaacaaaaactttgtacccaacacatcaaatattgcccatagcgcacacatg
gatattttccagaatttagctgtcgatctggataccgaaggacgttatttgttcctcaat
gccattgccaatcaattgcgttatccaaacagtcatacgcactactttagttgtgcggtc
cttcatctgtttgccgaagccaattcagaggccattcaggagcaaattacacgtgttctg
ctcgagcgtttgattgttaatcgtccacatccatggggattgttaatcaccttcattgag
ctaatcaagaatccgatttacaaattttgggatcatgatttcgtccattgtgcaccggag
ataaccaaactcttcgaatctgtggcccgttcatgtttggccaaatcgggtgtgaatcaa
cagctcaacatggccgttgttgatggcgagaatcaggaggtggtcaatattaactga
DBGET
integrated database retrieval system
