Drosophila yakuba: Dyak_GE22247
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Entry
Dyak_GE22247 CDS
T01068
Name
(GenBank) uncharacterized protein, isoform C
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dya
Drosophila yakuba
Pathway
dya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dyak_GE22247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dya03019
]
Dyak_GE22247
Messenger RNA biogenesis [BR:
dya03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Dyak_GE22247
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Dyak_GE22247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_1st
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
DUF4327
Motif
Other DBs
NCBI-ProteinID:
KRJ98513
UniProt:
A0A0R1DTS9
LinkDB
All DBs
Position
2L
Genome browser
AA seq
2505 aa
AA seq
DB search
MNVESQLKTPLTHIRNLVKHVSKRNFNESSEQIKQFVKEHGLEADRSSLRHLFSVINFSD
PAPSVTAQLQAKLLGAQLQRQLQSSSFVSNICYAFDQYFASNQKSIKAAAVADLVGQVAR
LTGINKVCECVFALAVTHSSYTELRHSARNNLKGSLSELIDSYLGKNNSSPASSGLQEIS
FDLLQYLLCCLSEYVKPQLEAQFLVKLREEFPRQAVPLVLAPFLYGSTTATIAGAGASET
DAEAEATTSSNSSSSEADALNEVGIEDIYDHLSEIIFTNQGKNNIMDTSWINLILEIGYE
FTSSVEECKNHLCSRERERAELQSKDVAKIVGLMCRRHSSLLDCNVNLPTPANFWPGQGQ
GAGSNSSGSSQTQITPQQQTPGSSNNNDGSDGNSSSDKKDKKETTDATQTWKPDVFVQAL
KEVVPQLNWKDVCMELDHPEFVLKDRIGLELLLTILRLATGSNIFPHPECIYRHWANTEG
QLSLIATMLKNPDLFSFADFVFSQPALDVLKTAPDADNKEISAWKSLHLVEVLLTIADKG
YYTQVHELFKFPAQNCPDVLFLALLNTSPPMTPLRQDLFNQLIPTFLGNHPNSNVILASA
WSSNNFQLRSNIMNAMSEWYLRGNEFDQVKLSRILDLAQDLKALSALLNARSFLFIIDLA
CLASRREYLKLEKWLTDKIREHGEPFMQAIIKVLHRRCPQVINAKVPEDQLPPKQAQLLP
ETVTTMINCLQTCINNCMQPEMVEVIMQMTANVAIMANKARAQQQQPGLVPPPPPTILRG
HRGMDLPGGIVPPPPQQPFSGNLNAQMFGPGMDPLTNMSNNIAGLNLSGPNGAFNFGNML
TSPSRLMTPGANPYPLNLMQMPQAPPPPNVGNLGRMLPGGPQQQTPTPTPTAPNPNNPVM
ADLQIPVSKEVEDEVNSYFQRIYNHQPNPTLSIDEVLDILQRFKESSNRREQEVFLCMLR
NLFEEYRFFCQYPEKELQITAQLFGGIIDRNLVPTFVALGLSLRCVLDALRKPDGSKLYY
FGVTALDRFRTRLHTYNKYCEHIRSIPHFSDFPPHLIQYVEYGMHGQEPPPQKLIGLSNT
IPSAISSGPATEPIYRNSSMLGNMPAATPGSGPKSSAAISHATRMKSIANATNIDTLLVA
NQEEKVTVPPEPVQDKTAFIFNNLSQLNIPQKCDEIKEIMTKEYWPWLAQYLVLKRASME
FNFHTLYYNFLDALKNGEINRFVTKETLRNIKVLLRSDKGVINFSDRSLLKNLGHWLGMM
TLGRNRPILQLDLDLKSLLAEAYHKGQQELLFVVPFVAKILESSAKSRIFRSPNPWTMGI
MYVLGELHQEPDLKLNLKFEIEVLCKTLNLELAKLRPVIYLKDPSRALLIEQQMSQPKPK
QLEAVVPAPTLPREQQSPAQPPPPPQQQQQPQQQAPPPPSSADVDAQNAAAMMMAAGGAN
STPGSVSSPNLPTDPSQVVLPPPEPRYSYVDVNVSNFQLIGQQLVLPPNTPFLHANPGIK
HIVVNAVERTITDWLQPIVDRSIRIACATTEQIIRKDFALDADENRMRTAAHQMVRNLAA
GMAMITGKDEIARAISQNLHKALLSALNGMPSMAEIQAAAMQLASENVELVCAFIQKTSA
EKAAAEIDRRLSTDFETRKIAREEGNRFVDAQILSYQQERLPEAVRIKVGPAPATLYAVY
SEFARSIPGFQQMSDRDIALFVPKPTDLSQPNVFANDESSMVYAELASKMETFMNTAIGV
PSLQIQASKMHMLLNALMATRRLRDQESAFNLLTRAVEGLTEGLVNMHENMEQMKLYQNI
HLRIIGLLHNSFGAPNTERAVTKCFFDIREEARYNVEAARALITSHFVNLNQFDGMLRDC
MDNGNNYVATSFGIALLERLIMDDRVINIVSDNEFMATVELLGRLTQHRHRYPECIVNAI
DTLWSGNFNSSSDYSPFNGSERYLSGASHYIHSGMHHVRSCDTDDPPGLQEKTEFLLKDW
VALYTQQNQQSTRDARNFGAFVQKMNTYGILKTDDLITRFFRQATHICTDVVYRMFAEPS
LPINQAKNKIFQWIDAFVHLIAMLVRHSGEAGNPTTKINLLNKVLGIVLGTLLKDHEMRG
VSFQQVGYHRFFMMLFMELCSADVILESLMHSIVSAFAYTYHLLNPSVAPGFCFAWLELI
SHRVFLGRILVQIPGQKGWPLYAQLLQDLFKYLAPFLRNTELGKPVQLLYKGTLRVLLVL
LHDFPEFLCDYHFGFCDTIPPNCVQMRNIILSAFPRNMRLPDPFTPNLKVDMLSDSSNAP
KVLSSYIMNIQPPNFKKDLDSYLKARAPVTFLSELRGHLQVTSEPGTRYNMALMNALVMY
VGTQAIALIRNKNFVPNTSNIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHT
HYFSCAVLHLFAEANSEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWDHD
FVHCAPEITKLFESVARSCLAKSNVTQQLNMPVVDGEAQEVANIN
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagagagccaactgaagacaccgctaacgcacatacgaaatctggtcaagcac
gtgagcaagcgaaattttaatgagagcagcgagcaaataaagcagttcgttaaagagcac
ggcctggaagcggatcgcagcagcctgcgccacctgttctccgtgatcaacttcagcgat
cccgcgccatcagttaccgcccagctgcaggcgaagctcttgggcgcccaattgcagcgg
cagctgcagagttcctcgtttgtttccaacatctgctacgcttttgaccagtacttcgcc
agcaatcagaagtccataaaggctgctgcggtagcggatctcgttggccaagtcgcccga
ctgaccggcatcaacaaggtttgtgagtgcgtctttgccttggccgtgacccactcctcg
tacacagaactcaggcattcggccaggaacaacttaaaaggtagcctcagcgaactgata
gactcttatttgggtaaaaacaatagcagcccggctagcagcggtcttcaggagatctcc
ttcgatctactgcagtatttattgtgctgccttagcgagtacgtaaaaccgcagctggaa
gcacagtttttggtcaagcttcgggaggagtttccgcgccaggcggtaccgctggtttta
gcgccgtttctgtacggctcgacgacggcgacgattgcgggagcaggtgccagcgaaacg
gatgcggaggccgaagcgacgactagcagcaacagctccagttccgaggcagatgctctg
aacgaggtgggaatcgaggatatttatgaccatttaagcgaaataatatttaccaaccag
ggcaaaaataatattatggacacatcttggattaatctaatccttgaaatcggttatgaa
tttacatcgagcgttgaagagtgcaagaatcatttgtgttcccgtgaacgagaacgcgct
gagctccagtccaaagatgtcgccaagatcgtgggtcttatgtgccgccggcactcgtcc
ctgctcgattgtaatgtgaatctaccgacaccggccaacttctggcctggtcaggggcag
ggcgctggcagcaacagcagtgggtcttctcagacacaaatcactccgcagcaacagacc
ccaggcagcagtaacaacaacgatggcagcgatggcaattcgtccagtgataagaaggac
aagaaggagacgacggatgccacgcaaacttggaagccagatgtctttgtgcaggcgctc
aaggaggtggtgcctcagcttaactggaaggacgtgtgcatggaactggatcatcccgag
ttcgtgctgaaggatcgtatcggtttggagctattgctcaccatccttcgactggccact
ggctccaacatatttccacatccagaatgcatttaccgtcactgggcaaacacggaaggt
cagctgtcgcttatcgcgacaatgctgaagaaccccgatctcttctccttcgccgacttt
gtttttagccaaccagcgttggatgtgcttaaaacggctccggatgcggacaacaaggag
atctcggcctggaagtcgcttcacctggtggaggtgttgctcactattgcggacaaggga
tactatacgcaggtccatgagctgttcaagttcccagcgcagaactgtcccgatgtgcta
tttttggccttattgaacacaagtccgcctatgacgccactacgtcaggatctgtttaac
caactgataccaacgttccttggcaaccaccccaactcaaacgttatcttggctagcgcc
tggagctcgaacaacttccaacttcggtccaatatcatgaatgctatgtccgagtggtat
ctgcgaggcaatgagttcgatcaggtgaaactgtcgcgaattctggatcttgctcaggat
ttaaaagcgctatcggcgctgcttaatgcccgctcctttttattcattatcgacctggct
tgccttgcctctcgacgcgagtacctgaagctggaaaagtggcttactgataaaattcgc
gaacatggggagccttttatgcaggctataatcaaggttctgcaccgccgctgcccacag
gttatcaacgccaaagtgccagaggaccagctgcctccgaagcaggcgcagctcttgccc
gagacagttaccaccatgatcaactgtctgcaaacgtgcatcaataactgcatgcagccg
gagatggtcgaagtcatcatgcaaatgaccgcaaacgtggccattatggctaacaaggcg
cgtgctcaacagcagcagccaggattagttccgccgcctccaccaacaattctgcgcggc
catcgtggtatggatctgccagggggcattgtccctccgccaccgcagcaaccgttctcc
ggaaacctcaacgcgcagatgttcggacctggaatggatccgctgacaaatatgtccaac
aacatagccggccttaacctgagcggcccgaacggagcatttaattttggaaacatgctg
acctctccatcgcgtctgatgactccgggagccaatccctatccgctgaacctcatgcag
atgccacaggctccaccaccacccaatgtaggcaacctcggccgcatgctgccagggggt
ccacaacagcagactccaacgccgactccaacagcccctaatccaaacaaccctgtgatg
gccgatctccagatacctgtgtcgaaggaagttgaagacgaggtcaactcatactttcag
cgcatctacaaccaccagccgaatccaacgctgtccatcgatgaagtgctggacattttg
caacgatttaaagagtcaagtaaccggcgcgagcaggaagtctttttgtgcatgctgcgc
aatcttttcgaggaataccgctttttctgtcaatatccagagaaagagctacagattact
gcgcagctatttggtggcattattgaccgcaacctggtgcccacttttgtagcgctgggt
ctttctctgcggtgtgtcttggatgctctccgtaagcccgatggatccaaactttactat
ttcggtgtgacggcactagacaggttcagaactcgattgcatacctacaacaaatactgc
gagcatatccgctccattcctcacttctctgactttccgccgcaccttattcagtatgtg
gaatacggaatgcacggccaggagccgccgccgcagaagttgattggactcagcaatacg
attccttctgcgatatccagcggaccagcaacggaaccaatttacaggaacagctcgatg
ttaggcaatatgcccgctgccaccccgggatcggggccgaaatcaagcgctgctatatca
catgccacgagaatgaagtcaatcgccaatgccaccaatatcgacacacttttggtggcc
aaccaggaagagaaagtgactgtgccacctgaacctgtacaggacaaaactgcctttatt
ttcaataacctgagccagctgaacataccgcagaagtgcgatgagataaaggagattatg
accaaggagtattggccgtggctagcgcaatatttggtcctcaaacgtgcatcaatggag
ttcaacttccacacactctattacaactttttggatgcactcaaaaacggcgagattaac
cgattcgtaaccaaagagaccctacgcaacatcaaggtactcttgcgctccgataaggga
gttattaatttctccgatcgtagtctgctgaagaacctaggacactggttgggcatgatg
accttaggtcgcaatcgccctatcctgcaattggacctagatcttaaatcccttttggct
gaagcttaccataagggccagcaggaactgctttttgtggttcctttcgttgccaagatc
cttgagtcgtccgccaagtctcgtattttccgatcacccaatccttggacaatgggtatt
atgtacgtgcttggtgagcttcaccaggagccagacctcaagctgaacctcaagtttgaa
atcgaagttctatgcaaaacacttaatttggagttggccaagttgcgaccagtgatctac
ctgaaggatcccagtcgtgctcttcttattgaacagcagatgtcgcaaccaaaaccgaaa
caacttgaggcagtggttcctgcacccacactaccgcgtgaacagcaatccccggcacag
cctccgccgccaccacaacagcagcaacaaccgcagcagcaggcacctccaccgccatct
tctgcggacgtggacgctcaaaatgcggccgccatgatgatggcagcaggaggagctaat
agtactcctggatcggtatcttcgcctaatctacccaccgatcccagccaggtggtacta
ccgccaccagagccgcgctattcgtacgtggacgtaaacgtgagcaacttccagcttatt
ggtcagcagttggtactgccacccaatacaccgttcctgcacgccaatcccggaatcaaa
catattgtggtcaacgccgtagagcgcacgataaccgactggttgcagcctattgtggac
cgaagcatccgaatcgcctgtgctaccacagagcagatcatccgcaaggactttgcctta
gatgctgacgagaaccgaatgcgcactgccgctcatcagatggtacgaaacctggccgcc
ggcatggctatgattaccggtaaggatgagatagcgcgtgctattagccagaatctgcac
aaagccctgctgtcggctctaaatgggatgcccagcatggcggagatccaagctgctgct
atgcagctagcaagcgaaaatgttgagctggtttgcgctttcattcagaaaacatcggct
gaaaaggcagcggctgagatcgataggcgcctaagcaccgatttcgagaccaggaaaatt
gctcgtgaagagggcaaccgttttgtggacgcccagatccttagctatcaacaggagcgt
cttccagaagcagtgcgtatcaaggtgggcccggctccagctacactttatgctgtgtac
tcggagttcgctagaagcatacctggcttccagcagatgagcgatcgggatattgctcta
tttgtgcccaagccgacggatttgtcccagccaaatgtgtttgctaatgatgagagcagc
atggtatacgcggaactggcaagcaaaatggagacctttatgaacacggccattggagtg
ccgtcactccagatccaggctagcaagatgcacatgcttctcaacgcgttgatggcgacg
cgtcgactgcgtgaccaagagtctgccttcaacctgctgacccgcgcggtggagggtttg
acagaaggattggttaatatgcatgaaaacatggaacaaatgaagctgtatcaaaatatc
catctccgtatcattggtttgctgcacaacagttttggtgctccaaacacagagcgagcg
gtaacaaaatgttttttcgacattcgagaggaggcgcgatataacgtggaggcagctcgc
gcgctgattacgtcgcactttgtcaatctcaatcagtttgacggaatgctccgcgactgc
atggacaacggaaacaattatgtggccacatcgttcggtatcgcactgctggagcgccta
atcatggatgatcgagtgattaacattgtttcggacaacgaattcatggccactgttgag
cttctaggtaggctaactcagcatcgccatcggtatccagaatgcattgtgaatgctatt
gatacgctctggagcggaaactttaactcaagcagcgactacagcccgttcaacggcagt
gagcgctacttgtcgggagcttcccactacatccactccggcatgcaccacgtcaggtca
tgcgatacagatgatccgccgggcttgcaagagaagacagagtttttgcttaaggattgg
gttgcactgtatacacaacagaaccagcagtctacacgcgatgcacgcaacttcggagca
tttgttcaaaagatgaacacatatggaattctgaagacggacgacttgattacccgcttt
ttccgccaagccacacacatttgcacggatgtggtgtacagaatgttcgccgagccaagt
ttaccaatcaaccaggccaagaacaaaatattccaatggatcgatgcgttcgtccaccta
atcgcaatgctcgtgcgacactcaggtgaagcaggtaatccaactacgaagatcaacctt
ttgaacaaggtgttgggcattgttctcggaacgctgcttaaggaccatgagatgcgcggc
gtgagtttccagcaggttggctaccatcgcttcttcatgatgctgttcatggagctgtgc
tcggccgatgtgattctcgagtctcttatgcacagcattgtgtcggccttcgcttacaca
tatcacttgttaaatcccagcgtggctccgggcttctgctttgcttggttggagctcatt
tcgcatcgcgtcttcctgggccgcatcctcgtccagattcccgggcaaaagggctggccg
ctttacgcccaattgttgcaggacctttttaaatatcttgcgcccttcttacgcaacact
gagcttggcaaaccagtccaacttttgtacaaggggacgctgcgtgttctactcgttctt
ctacacgacttcccggagttcttgtgcgattatcattttgggttctgtgacaccatccca
cccaactgcgtccagatgcgtaacatcatcctgtcggcgtttccgcgcaacatgcgcttg
cccgatcccttcacgcccaacctaaaggttgatatgctgtcggacagtagcaatgcacct
aaggtgcttagcagctacattatgaacatccagccgccgaacttcaagaaggatttggac
tcgtacctcaaggctcgggcaccggttactttcctctcggagttacgtggtcacttgcag
gtgaccagcgagccaggaactcgatacaatatggcactgatgaatgctctggtcatgtat
gtgggtacgcaggcgattgcgttaatcagaaacaaaaactttgtgccgaacacctcaaac
atagcacacagcgctcacatggatatcttccagaatcttgctgttgatttggatacggag
ggtcgctatctgttcttgaatgcgattgcgaaccagttgcgctatcccaacagccacaca
cactacttcagctgcgctgtgctacatctgtttgccgaggccaactcggaggcaattcag
gagcagatcactcgcgtgcttctggaacgtttgatcgtgaaccgcccgcatccttgggga
ctgttgatcacttttattgagctgatcaaaaatcccatctataagttctgggaccatgac
tttgtgcactgtgcgccagagattaccaagcttttcgaatcggtggctcggtcctgtctg
gccaagtcgaacgtcacccagcagttgaacatgcccgtcgtcgatggcgaggcccaggag
gtagccaacatcaactga
DBGET
integrated database retrieval system
