Dyella sp. GSA-30: DYGSA30_21060
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Entry
DYGSA30_21060 CDS
T10269
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
dyg Dyella sp. GSA-30
Pathway
dyg02024
Quorum sensing
dyg03060
Protein export
dyg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
DYGSA30_21060 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DYGSA30_21060 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DYGSA30_21060 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dyg02044
]
DYGSA30_21060 (ffh)
Enzymes [BR:
dyg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
DYGSA30_21060 (ffh)
Secretion system [BR:
dyg02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
DYGSA30_21060 (ffh)
Eukaryotic Sec-SRP protein
DYGSA30_21060 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
Zeta_toxin
AAA_16
AAA_33
AAA_30
AAA_31
DnaB_C
KTI12
T2SSE
AAA_14
APS_kinase
Helicase_RecD
AAA_24
MobB
YqeC
Fer4_NifH
NACHT
6PF2K
TsaE
ResIII
SLFN-g3_helicase
ATP_bind_1
Sigma54_activat
nSTAND3
ATPase
AAA_5
Thymidylate_kin
ArsA_ATPase
AAA_25
AAA_19
Rad17
Motif
Other DBs
NCBI-ProteinID:
BDU20649
LinkDB
All DBs
Position
2398104..2399486
Genome browser
AA seq
460 aa
AA seq
DB search
MFESLSQRLSATVDRLRGRGRLTEENIRESLREVRIALLEADVALPVVQALIERVKVRAV
GQDVLKSLSPGQALVKVVSDELTAVMGTVNAELNLAQQPPAVVLMAGLQGAGKTTTVAKL
ARFLTERKKKKVMVVSCDVYRPAAIEQLRTLAEQVGVKFFPSEAGQNPVDIAKAAIAAAR
REVIDVLLVDTAGRLHVDEAMMAEIKALHAAITPIETLFVVDAMTGQDAANTAKAFAEAL
PLTGVVLTKTDGDARGGAALSVRYVTGRPIKFLGAGEKTDALEPFHPDRVAQRILGMGDV
LSLVEEVERKVDQEKAHKLAQKVMKGKRFDLNDMKDQLEQMNNMGGLAGLMDKLPGVANL
PDNVKSKVNNKEIDRMVAIISSMTKKERRHPDLLNGSRRARIARGSGTQPADVNRLLKQY
MQMEKMMSKLSKGGSKGLMRQMRGAMKGMGGMGGGMPPMR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagtcgctcagccaacgcctttccgccaccgtcgaccgcctgcgcggccgcggg
cggctgacggaagaaaacatccgcgagagcctgcgtgaagtgcgtatcgcgctgctcgaa
gccgacgtggcgctgccggtggtgcaggccttgatcgagcgggtaaaggtgcgcgcggtc
ggtcaggacgtgctcaagagcctgtcgcccggccaggcgctggtcaaggtggtcagcgat
gagctgaccgcggtgatgggtacggtcaatgccgagctcaacctggctcagcagccgccg
gcggtggtgttgatggcgggcctgcagggtgccggtaagacgaccacggtcgccaagttg
gcgcgctttctcaccgagcgcaagaaaaagaaagtgatggtggtcagctgcgacgtctat
cgtccggccgccatcgagcagttgcgtacgctggccgaacaggtcggggtgaagttcttc
ccgtccgaggcgggccagaatccggtcgacatcgccaaggccgcgatcgctgccgcccgt
cgcgaagtgatcgacgtgctgctggtcgataccgccggtcgcctgcatgtggacgaggcg
atgatggccgagatcaaggccttgcatgccgcgatcacgccgatcgaaaccctgttcgtg
gtcgacgccatgaccggccaggatgcggccaacacggccaaggcttttgccgaagcgttg
ccgctgaccggcgtcgtgctgaccaagaccgacggcgatgcccgcggcggtgcggccttg
tcggtgcgctatgtcaccggtcgcccgatcaagttcctcggtgccggcgaaaaaaccgat
gcgctggagccgttccaccccgatcgtgtggctcagcgcatcctgggcatgggcgacgtg
ctgtcgctggtcgaggaagtcgagcgcaaggtcgaccaggagaaggcgcacaagctcgcc
cagaaggtcatgaagggcaagcgcttcgacctgaacgacatgaaggatcagctcgagcag
atgaacaatatgggcggtctggccggcttgatggacaagctgccgggcgtggccaatcta
ccggacaacgtcaaatccaaggtcaataacaaagaaatcgaccgcatggtggcgatcatc
agttcgatgaccaagaaggagcgccgccatccggacctgctcaacggctcgcgccgcgcc
cgtatcgcacgtggctcgggcacccagccggccgacgtcaaccgcctgctcaagcagtac
atgcagatggaaaaaatgatgtccaagctgtccaagggcggctcgaagggcctgatgcgc
cagatgcgcggggccatgaagggtatgggcggcatgggcggtgggatgcctccgatgcgt
taa
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