Dickeya zeae: W909_14870
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Entry
W909_14870 CDS
T03567
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dzc
Dickeya zeae
Pathway
dzc00040
Pentose and glucuronate interconversions
dzc01100
Metabolic pathways
dzc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
W909_14870
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
W909_14870
Enzymes [BR:
dzc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
W909_14870
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AJC67289
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Position
3253323..3254540
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AA seq
405 aa
AA seq
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MNNLSMSSVSRQKIAGRSALHTTKNALAAVIATALMVSTASAASLQTTKATETASTGWAT
QSGGTTGGAKASSSKIYAVKSISEFKAALNGSDSSPKIIQVTGAIDISGGKAYTSFDDQK
ARSQISIPSNTTIIGIGNKGKFTNGSLVIKGVSNVILRNLYIETPVDVAPHYETGDGWNA
EWDAAVIDNSDHVWVDHVTISDGSFTDDKYTTKNGEKYVQHDGALDIKKGSDYVTVSNSR
FELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVGERTPRVRFGSVHAYNNVYIGDVN
HKAYRYQYSFGIGTGGSLLSESNAFTIDNLKKISGRDKECSVVKAFNGKIFSDKGSIING
AAYNLNGCSFGFSAYTAKIPYKYSAQSITTSLANSISSNAGYGKL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacttatctatgtcttctgtttcgagacagaaaatagccggacgttctgccctc
cacaccacgaaaaacgcgttagccgccgtcatcgccactgcactgatggtatccaccgcg
tctgccgccagcctgcaaaccaccaaagcgacagaaaccgcctctaccggctgggcaaca
caaagcggcggtacaaccggcggcgctaaagcgtcatcgtctaaaatctatgccgtgaaa
agtatcagcgaatttaaagcggcgttaaatggaagcgattcgtcacccaagattattcag
gtaactggcgctatcgatatcagcggcggcaaagcctataccagctttgacgaccagaaa
gcccgcagccagatcagcattccgtccaataccaccattatcggtatcggcaacaaaggt
aaattcaccaacggttcgctggttatcaaaggcgtgagcaacgtcatcctgcgtaatctg
tatatcgaaaccccggtggacgtcgcgccacattatgaaactggtgatggctggaacgcc
gagtgggatgccgccgtgatcgataattcggatcacgtttgggttgaccatgtgaccatc
agcgatggcagctttactgatgacaaatacaccactaaaaatggtgaaaaatatgtccag
catgacggggcgctggatatcaagaaaggctctgactacgttaccgtttccaacagtcgt
ttcgaactgcatgacaaaaccattctgatcggccacagcgacagcaacggctcacaggat
tccggcaaactgcgcgtcactttccacaacaacgtgtttgaccgcgtcggtgaacgaacg
cctcgggtacgtttcggcagcgtgcatgcttacaacaacgtctacatcggcgacgttaac
cacaaagcctaccgttatcagtacagcttcggcatcggcaccggcggtagcctgctgtct
gaatccaacgcctttactattgataatctcaaaaagatcagtggtcgcgataaagaatgc
agcgtggtcaaagcctttaacggcaagatcttctccgataaaggctcaatcatcaacggt
gcggcgtacaatctaaacggttgcagttttggtttcagcgcttataccgctaaaatcccc
tacaagtactcagcccagagcattacgaccagtctggcaaacagcatcagcagcaacgcg
ggttacggcaaactgtaa
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