Dickeya chrysanthemi: Dd1591_0011
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Entry
Dd1591_0011 CDS
T00930
Name
(GenBank) Sigma 54 interacting domain protein
KO
K14414
transcriptional regulatory protein RtcR
Organism
dze
Dickeya chrysanthemi
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dze03000
]
Dd1591_0011
Transcription factors [BR:
dze03000
]
Prokaryotic type
Other transcription factors
Others
Dd1591_0011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
NACHT
AAA_22
AAA_2
T2SSE
MCM
AAA_14
AAA_19
AAA_7
GYF
KAP_NTPase
AAA_30
ABC_tran
AAA_33
IstB_IS21
ResIII
NTPase_1
ATPase_2
AAA_29
AAA_18
PIF1
Motif
Other DBs
NCBI-ProteinID:
ACT04905
UniProt:
C6CFG4
LinkDB
All DBs
Position
complement(13031..14620)
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AA seq
529 aa
AA seq
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MKRRVMIGVLGTALDKRGKRQNRWNRWRPTIAACQQPDLPIDRLELLYQPRSLGLAQQVQ
EDISQISPSTTVNLHEVELADPWDFEEVYTTFLDFAAHYPFDTENEEYLVHITTGTHVVQ
ICWFLLTEARYLPARLLQTSPSDHDDATPSPAGQYTVIDLDLSRYTAITSRFLREQQASV
SFLKAGIATRNATFNRIIDQIERVALRSSAPILLTGPTGAGKSFLANRIYQLKASRHQVN
GKFVAVNCATLRGDNAMSTLFGHVRGAFTGAQQSRAGLLREADGGILFLDEIGELGPDEQ
AMLLKAIEEKRFLPFGSDKEVSSDFQLIAGTHRDMPHWVEAGYFREDLYARINMWTFPLP
GLAQRCEDIEPNLDFELHRFAQQQQIQVRFDKEARQRFLAFACSEHASWRGNFRELGASV
HRMATLSEQGRINTVLVDEEIQRLKQQWRSTTANTILPAHLGELDIFEQCQLERVLEVCR
QTHSLSEAGRTLFAVSRRQKKQPNDADRLRKYLARFGLSWDDVKNTASI
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagagtgatgatcggcgtgctgggcacggcgttggataaacgcgggaagcgg
caaaatcgctggaatcggtggcggccaacaatcgccgcctgccagcaaccggatctgccg
attgaccgactggaattgctctatcagccacgtagtctcgggctggcgcaacaggttcag
gaagatataagccagatatcgccttccaccacggtgaatctgcatgaggttgaactcgcc
gacccctgggacttcgaagaggtctacaccacgtttctcgacttcgcggcgcactacccg
ttcgatacggaaaacgaagaatatctggtacatattacgaccggcacgcatgtggtacag
atttgctggtttctgctgacggaagcgcgatacctgccggcccggctgctgcaaaccagc
ccgtcggaccatgacgacgccacaccgtctcccgccgggcagtacaccgttattgacctc
gatcttagccgttacaccgccattaccagccgattcctgcgggaacaacaagcatccgtc
tcatttctgaaagcggggatcgccacccgtaatgcaacgtttaaccgcatcatcgaccaa
attgaacgggttgccctgcgttcttccgcgcctattttgctaaccggccccaccggtgca
ggcaaatcttttctggccaaccgtatttatcagctcaaggcgtcgcgccatcaggtcaat
ggaaagtttgtcgccgtcaattgcgccacactgcgcggcgataacgcgatgtccacattg
tttggtcatgttcgcggcgcattcaccggagcgcagcaatcacgggcagggctgttgcgg
gaagccgacggtggaatcctgtttcttgatgaaatcggtgagttggggccggacgaacag
gcgatgctgctgaaggcgatagaagaaaaacgctttctgccgtttggttccgataaagaa
gtcagcagcgattttcagttgattgccggcactcaccgggatatgccgcattgggtagag
gccgggtattttcgtgaagacctgtacgcacgcatcaatatgtggacttttccgctaccg
ggtctggcgcaacgttgtgaagatatcgaacctaatctggacttcgagttacaccgtttt
gcccaacagcaacaaatccaggtgcggttcgataaagaagcgcgccagcgttttctggcc
tttgcctgttcggagcacgccagctggcggggcaactttcgcgaactgggtgccagcgta
caccgcatggcgacgctatccgagcaagggcgcattaataccgtgctggtagatgaagaa
attcaacgccttaaacagcaatggcgcagcacaaccgccaatacgatattgccggcccac
ctcggtgagctggatatcttcgagcaatgccagcttgagcgagtgttagaggtatgccga
caaacccacagcctgtcggaagccgggcgtacactatttgccgtttcgcgccgacaaaaa
aaacagcccaacgacgccgacaggctacgtaaatatctggcccgctttgggttgagctgg
gatgacgtgaaaaacaccgcatcgatataa
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