Dickeya chrysanthemi: Dd1591_1089
Help
Entry
Dd1591_1089 CDS
T00930
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dze
Dickeya chrysanthemi
Pathway
dze00040
Pentose and glucuronate interconversions
dze01100
Metabolic pathways
dze02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dd1591_1089
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dd1591_1089
Enzymes [BR:
dze01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dd1591_1089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ACT05961
UniProt:
C6CNP1
LinkDB
All DBs
Position
complement(1258332..1259489)
Genome browser
AA seq
385 aa
AA seq
DB search
MKNTRVRSIGTKSLLAAVVTAALMATSAYAAVETDAATTGWATQNGGTTGGAKAAKAVEV
KNISDFKKALNGTDSSPKIIKVTGPIDISGGKAYTSFDDQKARSQISIPSNTTIIGVGSN
GKFTNGSLVIKGVSNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVT
ISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQ
DSGKLRVTFHNNVFDRVTERAPRVRFGSIHAYNNVYLGDVKHSVYPYLYSFGLGTSGSIL
SESNSFTLSNLKSIDGKNPECSIVKQFNSKVFSDKGSLVNGSTTTKLDTCGLTAYKPTLP
YKDKPQAMTSSLATSINNNAGYGKL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacgcgtgtacgttctatcggaaccaaaagtttactggctgccgttgtaaca
gcagcactgatggctacctctgcttatgcggcagtagaaactgatgccgcaacaactggc
tgggcaacgcaaaacggcggcactaccggtggcgcgaaggcagcaaaagcagttgaagta
aaaaacattagcgactttaaaaaagccctgaatggaaccgactcatcacccaaaatcatc
aaagtaacaggaccgattgatatcagtggcggcaaagcctacaccagtttcgatgatcag
aaagcgcgtagccagatcagtattccgtccaataccaccattatcggtgttggcagcaat
ggtaaattcaccaacggttctctggtgatcaaaggcgtaagcaacgttatcctgcgtaac
ctgtatatcgaaacgccggtagacgtagcaccgcattatgaaagtggggatggctggaac
gccgagtgggatgcagccgttatcgacaactctaccaacgtctgggttgaccacgtcacc
atcagcgacggtagcttcaccgacgacaaatacaccaccaaagatggtgaaaaatacgtt
cagcacgacggcgcactggatatcaagaaagggtctgactacgtcactatttcttacagc
cgcttcgaactgcacgacaaaaccatcctgatcggccacagcgacagcaacggctctcag
gattccggcaaactgcgcgtcaccttccacaacaacgtgttcgaccgcgtgactgaacgt
gccccgcgcgtacgttttggtagcatccatgcttacaacaacgtttatctgggcgacgtg
aaacacagcgtttatccgtacctgtacagcttcggcctgggcaccagcggcagcatcctg
tctgagtccaactccttcacgctctccaacctgaagagcattgatggtaaaaacccagaa
tgtagcatcgtgaagcaattcaacagcaaggtgttctccgataaaggctcactggttaac
ggctcaaccaccaccaagctggatacctgtggtttgacggcgtacaaaccgactctgccg
tataaagacaagcctcaagccatgacaagcagcctggctaccagcatcaacaacaacgca
ggctacggcaaactgtaa
DBGET
integrated database retrieval system
