Durio zibethinus (durian): 111285688
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Entry
111285688 CDS
T05242
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111285688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111285688
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111285688
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111285688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Glyco_hydro_84_hel
Motif
Other DBs
NCBI-GeneID:
111285688
NCBI-ProteinID:
XP_022730995
UniProt:
A0A6P5XS21
LinkDB
All DBs
Position
Unknown
AA seq
2344 aa
AA seq
DB search
MLQFSSLLSSHIRFLLQSLTDSNFVSVLRDLCQTLEYGIEGSILLLQTILYHMNLLGEDM
QRKQYMSGLFSEVFSYLLDQPNFGTVCCEAFRNVIISKKFLQEFSNELQLSVSEKVALGL
ALADSENDEFRTIGQDFNIGLIQELCRNPASVDSVEEIQNIILFFYQSEGLTKYVDSFMQ
MLALMEPKERTSLILAPLLKDDVKEARFLRNLDMFHNFNENEFDSLLVEMESETSVSDIM
REVGYRCTVNSTHCKEVLSNFLPLNEVTLSRILSTVAQSYSGLEDSQLSHSLFCSAIGSS
AAFDISCPGSWNVDILVDSVNQLAPGIHWKIVMEYLDHEGFYIPNSQAFSFFMSIYARAC
QDPFPLHAVCNSVWKNVDGQLSFLRYAVSAPVEIFTFEHSVRKLAYVEACNRHELLSIQG
NHAWLSLDLIDVLCQLAERGYANSVRAMLDYPLKHCPELLLLGISQICTAYNLLQHDVSS
AIFPMVVENSVGSLILYLWHSNSKFVAHGLVHMIKADQSSIIRMLGICYEQKILSSFLEQ
IPFSCSIRLAVLASQEEYLCLEKWLNDNLNDYKDIFAEECLKFFKEISLDAAEDMSHDLF
QSPGVVENIYFKTSSTFIKVFRANTEHITSDHIAEELERMNRASMHVKPRLQNVGTSDSS
NLYGYADDIEAEADSYLSQIFYSQMPINVMIHMLSKLKESSEKREQLIFDHVIQNLLDEY
RFFPRYPEKQLKIVAILFGSLIKHRLVNNLNLGIALRSVLDALRKPTDSKLFVFGTKALE
QFVDRLVELPQYCSLILQISHLRGMHPELVDFAESALAWISSSCLEKDEDNTYVIYPQDD
STAAASKNLKLPGVMTRQPSHQLSPSQQMEQRLEEVIGDRIKASMTSSICMKPLLPQSAH
PSNGFLNDVASSQKTVLSQNTIMAVPSTAPDFPHSRGVTSTRFGSALNIGTLVAAAEKRN
TLVETPASDVQDKIFFLINNISSSNVDAKVKEFTEILNEEHYSWFAQYMVMKRASIEPNF
HDLYLTFLKKVNSKRLNEEIVKDAYENCKVILRSELIKSSSEERSLLKNLGSWLGKFTIG
RNQVLRAREIDPKSLIIEAYERGLMIAVIPFTSKILEPCQYSLAYKPPNPWTMAILGLLA
EIYALPNLKMNLKFDIEVLFKNLGVDMKKVNPTSLLKNCLRKIEGNPDFSNRDVGASQPP
VVTQINSGIKSILNKVDLEPEIINTSHSDGQLKLVSGISKIETQFIFNNKLSSLGLHHLK
RVVSIIVERAIKKLLSPVVQRCVPIAIQTTKELVLKDYATESDETLIYDAAHSMVASLAG
SLAHVTCKETLHTSLSCQLRNSFQGLNVPNEHLEQAVALVINDNLDFGCAVIQHAASVKA
VQSIDCEITRQLSLRRKNREGIDRSYYDANINAQGPKTVISESQLPRPGQSSHSQQQVYE
DFVHFSWRNQVGQNSNVVPASLPASSGASVSSTLSCPQFPSAGQLNHGPYLSGNEPAGLD
GVNYPLDLISVEIDSNQFLSSSSTSIGATDDINLLAANQSSVSSLCPIAAAPEVHSEEVP
YARKELRPTAESLPTAPIDQLGSGISEPLLSMSDVLEKYQIISQKLDMLVSKESGEAEIH
RVVFQIPKIILKCVSQDEAALAIAQKVFKSLYENASNSSHVGSHISIIAAIRDVCKLVVK
EVTSWVIYSDEDRKFNTNITFGLMRKGLLNLAEYNKHMAKLIDSGKNKTATEFAISLLET
LLVQESSLTLSELPNLIDSLAKLAARPGAPESLQKLVEIAKNPPENAASPSGNIVGKNAR
DKKSSDHSVTIMDGNVNAESTGVDLAGFYDQVSVLFSEWYHTYIHHGANDAPCAYFVSKL
QQSGFLNGDDTSDKFFRFLMEHSVAHCLSSERIGSSLTFQSPQTAQDLSFLLVDVYAKLV
VVILKQYLATDHLLSKIFQLTVRVIQRKAEEKKASFNPRPYFRLFVNWLLDLVSPHAVLD
GAKFQVLIAFADTFHALQPLKVPAFSFAWLELISHKSFMPKLLTVNAPSGWVCAQLLLVD
LLKFMEPYLRNAKLEVPIRLLYKGTLRLLLVLMHDFPEFLCNYHFSFCDVIPSSCIQMRN
IILSAHPSNMQLPDPSTPNLKIDLLPDVHIAPHVFSEVDAALGAKQMKYDVDEYLKTTRQ
AFPFLSELKKKLLLPQNEAAAQAGTRYNVPLINSLILYVGMQTIQQLPKKNTPALAQQMT
CNGPMESYIMGPLLALFQTLIVELDAEGCYLVLNAIANQLRHPSSHTHLYSYAMLYLFNE
AKQETIKEQITRVLVERLMVNKPHPWGVKITFLELIKNPQYNFWSHAFIKCSPEIEKMVK
TISI
NT seq
7035 nt
NT seq
+upstream
nt +downstream
nt
atgttacagttctcatcgctgctttctagccatattcgattcttgctacagagtctcacc
gactccaatttcgtttctgttcttcgtgatctttgtcagactcttgaatatgggatcgag
ggaagcatcttgcttctacagacaattttgtatcacatgaatcttctgggggaagatatg
caaagaaagcaatatatgtcaggcctattttctgaagttttcagttatctattagaccaa
ccaaattttggtactgtgtgttgtgaagcattcagaaacgtaattatcagcaaaaagttc
cttcaggagttttccaatgaattgcaattgtcagtctctgaaaaagttgcccttggtctt
gctttggcagactcggagaatgatgagttcagaacaattggtcaggactttaacataggt
ttgatacaggagttatgtagaaatccagcctctgttgattctgttgaggagattcagaat
ataattttgtttttctatcagtctgagggtctaacaaagtatgtggactcctttatgcaa
atgttggctttgatggaaccaaaagagaggacgtctcttatattagctccactgctcaaa
gatgatgtaaaggaggctagatttctaaggaatttggatatgttccacaatttcaatgaa
aatgaatttgactcccttctggtggagatggagagtgagactagcgtgtctgatattatg
agagaagtgggatatagatgtacagttaattctacacattgcaaagaggtgttgtcaaat
ttcttacctttgaatgaagttactctgtctagaatacttagcactgttgcccaaagctat
tctggccttgaggacagtcaactttcacattcattattctgctctgcaattggtagcagt
gcagcatttgatatatcatgcccaggctcttggaatgtggacattttggtggattcagtt
aaccagcttgctcctggaattcattggaaaattgtcatggaatatctggatcatgaggga
ttttacattcctaacagccaggcattttcctttttcatgtcaatttatgcccgtgcatgt
caggatcctttccctcttcatgctgtatgcaactctgtttggaagaatgttgatggtcaa
ttatcttttctaagatacgctgtatcagccccggttgagatatttacctttgaacattct
gtcaggaagctagcatatgttgaagcgtgtaatcgccatgagcttttgtccatacaagga
aatcacgcttggttatcccttgaccttattgatgtgttgtgtcaattagctgagaggggc
tatgccaattctgtacgagcaatgcttgactaccctctcaaacactgccctgaactattg
ctgcttggaatttctcaaatttgtactgcttataaccttctccaacatgatgtctcttct
gccattttccccatggttgttgaaaattccgtgggaagcttgattctttatctttggcat
tctaattccaagtttgtggcacatggtttagtgcacatgattaaagctgaccaaagcagc
ataattagaatgttaggcatttgttatgaacagaagattttatccagtttcttggagcaa
attccattttcttgtagtattcgactagctgtattggcttcccaagaagaatacttatgt
ctggagaagtggttgaatgataatctgaatgattataaagacatctttgctgaggaatgt
ctaaaattttttaaggagatttctttagatgcagcagaagatatgtcccatgatttgttt
caatctcctggcgttgttgagaatatatatttcaagacaagttcaacatttataaaggtt
tttcgagctaacactgaacacatcacttctgaccacattgctgaagaattggaaagaatg
aatagggcttctatgcatgtcaagcctcgacttcagaatgttggcacttcagattcgtca
aatttatatggatatgctgatgatatagaggctgaagcagattcttatttgtctcagata
ttttacagtcagatgcctattaatgttatgattcacatgctttcaaaattaaaggaatct
tcagagaaaagggaacaattaatttttgatcatgtgatacagaatttgttggatgagtac
aggttcttccctaggtatccagaaaagcagctcaagattgttgctatcctgtttggctct
ctaatcaaacatcggcttgtaaacaatctgaatcttggtattgctttgcgtagtgtgcta
gatgcattgcgtaagcccacagactcaaagctatttgtgtttggaaccaaagctttagag
cagtttgtggaccgtttggttgagttgccacaatattgcagtcttattttgcaaatatcc
catttgcgtggaatgcatccagagcttgttgattttgctgaaagtgcgcttgcttggatt
tcatcaagttgcttggaaaaagatgaagataacacctacgttatttatccccaggatgat
tctactgcagctgcttcaaaaaatttgaagttacctggagttatgaccagacagccaagc
catcaactctccccttcacagcagatggaacagagacttgaagaagttattggtgataga
atcaaggcatctatgacttcaagcatatgcatgaaaccacttttacctcagtctgcccac
ccttcaaatggcttcctgaatgacgttgctagcagtcagaagactgtcctgtcacaaaat
acaataatggcagttccatccactgctcctgattttcctcattctaggggagttacttca
actaggtttggttcggctctaaatattggaacacttgttgcagcagccgagaagaggaat
actcttgttgagactcctgcatccgatgttcaggataagatatttttcttgattaataat
atttcatcatcaaatgttgatgctaaagtgaaggaatttactgagattcttaatgaggaa
cattattcatggtttgcacaatacatggtgatgaaaagagcaagcattgagccaaatttt
catgacttgtacttgacttttctgaagaaagtcaattcaaaaagactgaatgaagagatt
gtcaaggatgcttatgagaattgcaaggttattttgagatctgagcttataaagtcaagc
tcagaagaacgttccttgctgaaaaatttaggtagttggcttgggaagtttactattggc
agaaatcaagtgctaagggcccgagaaatagatcccaaatctttaatcatagaggcatat
gagaggggcctgatgatagctgtgataccatttacctcaaagattttggaaccatgccaa
tatagtcttgcttacaagcctccaaatccttggactatggcaattcttggtttacttgca
gagatctatgcattgccaaatcttaaaatgaatctcaaatttgacattgaggttttattt
aagaaccttggtgtagatatgaagaaagttaacccaacatctcttctaaaaaactgtctc
cgcaaaatagaaggaaatcctgatttttccaacagagatgttggggcatctcagccacca
gtggttacccaaattaactctgggatcaagtctatactgaacaaagttgatttagagcct
gaaataatcaatacatctcattctgatggccagttaaagttggtttcaggaatttctaag
attgaaactcaatttattttcaataacaaactcagcagtttgggcttacatcatttgaaa
agagttgtctccatcattgtggagagggctatcaaaaagctcctctctccagttgttcaa
cgctgtgttcccatagcaatccagacaacaaaggaacttgttctaaaggactatgctaca
gagtcagatgaaaccctcatatatgatgctgcccattcaatggtagctagtttggctgga
agtctagctcacgtcacatgcaaggaaactcttcatacctcactatcatgtcaactaagg
aattcatttcaggggttgaatgttcccaatgaacatcttgaacaagctgttgctcttgtt
atcaatgataaccttgattttgggtgtgcagtaattcaacatgctgcatctgtgaaggca
gtacaatccatcgactgtgaaattactcggcaactttctctaagaaggaaaaatagagag
ggtattgatcgttcatattacgatgcaaacattaatgctcaaggtcctaagactgttata
tcagagtcccaactccccagacccgggcagagttctcactcacaacagcaagtatatgag
gattttgttcatttttcctggagaaatcaagttggtcagaactcaaatgttgtccctgcc
agtctgcctgcttcatctggtgcttctgtcagttctacattatcttgtcctcaatttccc
tctgcagggcagcttaaccatggaccatacttatctgggaatgaacctgctggcttggac
ggtgttaattatcctttggatctcatttctgtggagattgactctaaccaatttcttagc
agttcttccactagtattggagcaactgatgacatcaatctgcttgctgctaatcaaagt
tctgtcagttctttgtgtccaattgctgctgccccagaagtgcattctgaggaggtgcct
tatgccagaaaagaattgagacctactgcagaatcattgcctacagctcccattgatcaa
ctgggaagtggaatctcggaacccttattatctatgtcagatgtactggaaaagtatcaa
attatttcccagaagttggatatgttggtgagtaaagagtctggggaggcagagattcat
agagttgtttttcagattccaaagatcatacttaaatgtgttagccaagatgaggctgcc
cttgcaattgctcagaaggttttcaaaagcttatacgagaatgcttcaaacagttcacat
gttggttcacatatttcaattattgctgctattcgcgatgtttgcaagcttgttgtcaag
gaggttacaagttgggtgatttattcggatgaggataggaagttcaatacaaatataact
tttggccttatgcgcaagggtttgcttaatcttgctgaatacaacaagcatatggcaaag
cttattgattctggaaagaataaaactgcaacagaatttgcaatatcgctccttgaaacc
ttattggttcaggaatcaagtctaactttgtcagaacttcccaatcttattgattccttg
gcaaagcttgcagcaagacctggagctcctgaatcattacaaaagttggttgagattgcc
aagaatcctccagaaaatgctgcaagtccttctggtaatattgttggcaagaatgctaga
gataaaaagagctctgatcattctgtgacaattatggatggcaatgtcaatgctgaatct
acaggagtagaccttgctggattctatgaccaggtttctgtgttgttctctgaatggtac
cacacatacatacatcatggtgcaaatgatgcaccttgtgcatattttgtctcaaaattg
cagcaaagtggatttctgaatggtgatgatacatcagataaattttttcgttttctcatg
gaacactcagttgcccattgcctttcttctgagagaattggttctagtttgacattccag
tcacctcagactgcacaggacctctcatttctattggttgatgtgtatgcaaagcttgtt
gttgtgattctgaagcagtatcttgcaacagatcatcttttatcaaagatttttcaattg
actgttagagtgattcagaggaaagctgaggagaagaaagcatcttttaacccaaggcca
tatttcaggctgtttgttaactggctattggaccttgtttcaccacatgctgtcttagat
ggtgccaaatttcaggttttgattgcttttgcagacactttccatgcattgcagcctctt
aaagttcctgctttcagcttcgcttggcttgagttgatcagtcataagagcttcatgcca
aaattgctcacagtcaatgctccaagcggttgggtttgtgctcagcttctactggttgat
ttgctcaaattcatggaaccttatttgaggaatgctaaacttgaagtgccgattcgtctt
ctatataaaggcactttgaggttgctgcttgtgttaatgcatgatttcccagagtttctg
tgtaattatcacttcagcttctgtgatgtaattccatccagctgcattcagatgcgaaat
attatccttagtgcccatccaagtaacatgcagctgcctgacccttctacaccaaactta
aagattgatttattgccagatgtgcacatagcaccacatgtattctctgaggttgatgct
gctctaggagctaagcagatgaaatatgatgtagatgagtatcttaagacaacacggcag
gcatttccattcttatctgagctgaagaagaaattactactgccccaaaatgaggctgca
gcacaagctggaacccgatacaatgtgccgttaataaactccctcatcctgtatgttgga
atgcagaccatccagcaattaccgaaaaagaacactcctgcccttgcacagcagatgact
tgtaatggtcccatggaatcatatataatgggtcctctgttagcccttttccaaacgtta
attgtggagctggatgctgagggctgctatcttgtccttaatgcgatcgcaaatcagcta
cgccacccaagcagccacactcatctatattcctatgccatgctatacttattcaatgaa
gcaaaacaggaaaccattaaggagcagataacaagagtgttggttgaacgcttgatggtt
aataaacctcatccttggggtgttaagatcacgtttcttgagctcatcaagaatcctcag
tacaacttttggagtcatgctttcatcaagtgttcgccagagatagagaaaatggtcaaa
acaatttcaatctaa
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integrated database retrieval system
